Global cold-chain related SARS-CoV-2 transmission identified by pandemic-scale phylogenomics

作     者：Dalang Yu Junwei Zhu Jianing Yang Yi-Hsuan Pan Hailong Mu Ruifang Cao Bixia Tang Guangya Duan Zi-Qian Hao Long Dai Guo-Ping Zhao Ya-Ping Zhang Wenming Zhao Guoqing Zhang Haipeng Li Dalang Yu;Junwei Zhu;Jianing Yang;Yi-Hsuan Pan;Hailong Mu;Ruifang Cao;Bixia Tang;Guangya Duan;Zi-Qian Hao;Long Dai;Guo-Ping Zhao;Ya-Ping Zhang;Wenming Zhao;Guoqing Zhang;Haipeng Li

作者机构：National Genomics Data Center&Bio-Med Big Data CenterCAS Key Laboratory of Computational BiologyShanghai Institute of Nutrition and HealthChinese Academy of SciencesShanghai 200031China National Genomics Data CenterBeijing Institute of GenomicsChinese Academy of Sciences and China National Center for BioinformationBeijing 100101China Key Laboratory of Brain Functional Genomics of Ministry of EducationSchool of Life ScienceEast China Normal UniversityShanghai 200062China State Key Laboratory of Genetic Resources and EvolutionYunnan Laboratory of Molecular Biology of Domestic AnimalsKunming Institute of ZoologyChinese Academy of SciencesKunmingYunnan 650223China Key Laboratory of Synthetic BiologyCAS Center for Excellence in Molecular Plant SciencesInstitute of Plant Physiology and EcologyChinese Academy of SciencesShanghai 200032China School of Life and Health SciencesHangzhou Institute for Advanced StudyUniversity of Chinese Academy of SciencesHangzhouZhejiang 310024China Shanghai Southgene Technology Co.LtdShanghai 201203China University of Chinese Academy of SciencesBeijing 100049China 

出 版 物：《Zoological Research》 (动物学研究（英文）)

年 卷 期：2022年第43卷第5期

页      面：871-874页

核心收录：

学科分类：1007[医学-药学(可授医学、理学学位)] 100705[医学-微生物与生化药学] 1001[医学-基础医学(可授医学、理学学位)] 100103[医学-病原生物学] 10[医学] 

基　　金：supported by the National Key Research and Development Project (2020YFC0847000,2021YFC0863300, 2020YFC0845900) the Strategic Priority Research Program of the Chinese Academy of Sciences (XDPB17) the National Natural Science Foundation of China (31100273, 91731304,31172073) Shandong Academician Workstation Program#170401 (to G.P.Z.) 

主　　题：primarily EDIT identif 

摘      要：DEAR EDITOR,The COVID-19 pandemic caused by SARS-CoV-2 continues to pose a tremendous threat to human society. SARS-CoV-2is airborne and transmits primarily through social contact;however, whether cold chain-related transmission has occurred remains highly debated(Han & Liu, 2022;Lewis,2021;Ma et al., 2021;Mallapaty et al., 2021;Pang et al.,2020;Wu et al., 2021). Here, we present a novel method and identify two transmission routes based on lineage-specific reductions in the SARS-CoV-2 evolutionary rate.