this book constitutes the refereed proceedings of the 13th International workshop on algorithms in bioinformatics, wabi 2013, held in Sophia Antipolis, France, in September 2013. wabi 2013 is one of seven workshops wh...
ISBN:
(数字)9783642404535
ISBN:
(纸本)3642404529;9783642404528;9783642404535
this book constitutes the refereed proceedings of the 13th International workshop on algorithms in bioinformatics, wabi 2013, held in Sophia Antipolis, France, in September 2013. wabi 2013 is one of seven workshops which, along withthe European Symposium on algorithms (ESA), constitute the ALGO annual meeting and highlights research in algorithmic work for bioinformatics, computational biology and systems biology. the goal is to present recent research results, including significant work-in-progress, and to identify and explore directions of future research. the 27 full papers presented were carefully reviewed and selected from 61 submissions. the papers cover all aspects of algorithms in bioinformatics, computational biology and systems biology.
the proceedings contain 28 papers. the topics discussed include: extending the reach of phylogenetic inference;protein (multi-)location prediction: using location inter-dependencies in a probabilistic framework;toward...
ISBN:
(纸本)9783642404528
the proceedings contain 28 papers. the topics discussed include: extending the reach of phylogenetic inference;protein (multi-)location prediction: using location inter-dependencies in a probabilistic framework;towards reliable automatic protein structure alignment;a minimum-labeling approach for reconstructing protein networks across multiple conditions;faster mass decomposition;accurate decoding of pooled sequenced data using compressed sensing;a novel combinatorial method for estimating transcript expression with RNA-seq: bounding the number of paths;a polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs and its application to the detection of alternative splicing in RNA-seq data;and distribution of graph-distances in Boltzmann ensembles of RNA secondary structures.
this paper presents two new deterministic algorithms for constructing consensus trees. Given an input of k phylogenetic trees with identical leaf label sets and n leaves each, the first algorithm constructs the majori...
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