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共 109 条记录，以下是21-30 订阅

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2D henon-chebyshev chaotic map for image encryption 21

2D henon-chebyshev chaotic map for image encryption

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21st IEEE international conference on High Performance computing and Communications, 17th IEEE international conference on Smart City and 5th IEEE international conference on Data Science and Systems, HPCC/SmartCity/DSS 2019

作者： Qi, Fei Huang, Sijiang Li, Tong Yang, Haotian Kang, Xuejing School of Information and Communication Engineering Beijing University of Posts and Telecommunications China School of Computer Science Beijing University of Posts and Telecommunications China

ISBN: (纸本)9781728120584

Chaotic systems is widely employed in image encryption on account of its momentous properties including nonperiodicity, ergodicity, randomness and initial state sensitivity. However, some chaos-based cryptosystems still exhibit security problems due to the weak performance of their applied chaotic maps. To address those problems, a new two-dimensional HenonChebyshev map (2D-HCM) is first proposed in this paper. It is generated by connecting Henon map and Chebyshev map where the output of one map is used to adapt the input of the others. It results in a better chaotic performance in 2D-HCM, including better chaotic behaviors, higher chaotic index, wider chaotic range and finer ergodicity than other extant chaotic maps. Using the 2D-HCM, we further design an image encryption algorithm. the proposed algorithm disorganize the pixel positions of the input plain image with random sequence generated by 2D-HCM, and then convert it into dna-planes using dna operation rules. Finally, the cipher image is acquired by employing the newly defined dna-level 2D cellular automata (dna-CA) to update the dna-planes in each iteration where 2D-HCM produces the rule number sequences applied in the update. Our scheme has proven to be highly efficient and secure by the experimental results and security analysis. © 2019 IEEE.

关键词： dna

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Nanopore decoding for solution of Hamiltonian path problem in dna computing 17

Nanopore decoding for solution of Hamiltonian path problem i...

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17th Annual conference on Foundations of Nanoscience: Self-Assembled Architectures and Devices, FNANO 2020

作者： Takiguchi, Sotaro Takeuchi, Nanami Kawano, Ryuji 2-24-16 Naka-cho Koganei-shi Tokyo184-8588 Japan

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CMOSS: A Reliable, Motif-based Columnar molecular Storage System 24

CMOSS: A Reliable, Motif-based Columnar Molecular Storage Sy...

引用

17th international Systems and Storage conference (SYSTOR)

作者： Marinelli, Eugenio Yan, Yiqing Tattini, Lorenzo Magnone, Virginie Barbry, Pascal Appuswamy, Raja EURECOM Biot France IPMC Nice France

ISBN: (纸本)9798400711817

the surge in demand for cost-effective long-term archival media, coupled with density limitations of contemporary magnetic media, has resulted in synthetic dna emerging as a promising new alternative. Despite its benefits, storing data in dna poses several challenges as the technology used for reading/writing data on dna are highly error prone. thus, it is important to design pipelines that can efficiently use redundancy to mask errors without amplifying read/write cost. In this work, we present Columnar molecular Storage System (CMOSS), a novel, end-to-end dna storage pipeline that can provide error-tolerant data storage at low read/write costs. CMOSS differs from state-of-the-art (SOTA) on three fronts (i) a motif-based, vertical layout in contrast to nucleotidebased horizontal layout, (ii) integrated consensus calling and decoding enabled by the vertical layout, and (iii) a flexible, block-based data organization for random access over dna storage in contrast to object-based organization. Using an in-depth evaluation with several simulated and real wet lab experiments, we demonstrate the benefits of CMOSS design.

关键词： molecular storage dna storage PCR random access longterm archival error control coding read consensus

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Synthesizing Small and Reliable Tile Sets for Patterned dna Self-assembly

Synthesizing Small and Reliable Tile Sets for Patterned DNA ...

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17th international conference on dna computing and molecular programming

作者： Lempiainen, Tuomo Czeizler, Eugen Orponen, Pekka Aalto Univ Sch Sci HIIT Dept Informat & Comp Sci FI-00076 Aalto Finland

ISBN: (纸本)9783642236372;9783642236389

We consider the problem of finding, for a given 2D pattern of colored tiles, a minimal set of tile types self-assembling to this pattern in the abstract Tile Assembly Model of Winfree (1998). this Patterned self-Assembly Tile set Synthesis (PATS) problem was first introduced by Ma and Lombardi (2008), and subsequently studied by Goos and Orponen (2011), who presented an exhaustive partition-search branch-and-bound algorithm (briefly PS-BB) for it. However, finding the true minimal tile sets is very time consuming, and PS-BB is not well-suited for finding small but not necessarily minimal solutions. In this paper, we modify the basic partition-search framework by using a heuristic to optimize the order in which the algorithm traverses its search space. We find that by running several parallel instances of the modified algorithm PS-H, the search time for small tile sets can be shortened considerably. We also introduce a method for computing the reliability of a tile set, i.e. the probability of its error-free self-assembly to the target tiling, based on Winfree's analysis of the kinetic Tile Assembly Model (1998). We present data on the reliability of tile sets found by the algorithms and find that also here PS-H constitutes a significant improvement over PS-BB.

关键词： Reliability analysis

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Enhanced dna Binding Detection on Dense Particle Packed Microreactor Array 17

Enhanced DNA Binding Detection on Dense Particle Packed Micr...

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17th IEEE international conference on Nano/Micro Engineered and molecular Systems, NEMS 2022

作者： Zhang, Wenrui Li, Dachao Li, Xiaoping Tianjin University State Key Laboratory of Precision Measuring Technology and Instruments 300072 China

ISBN: (纸本)9781665483018

High throughput detection of multiple dna targets has become a widely used technique in molecular diagnostics. However, due to the limited surface in dense microreactor array microchip, it is impossible to attach a large number of oligonucleotide probes to a single cell, which therefore limits the detection sensitivity. this paper presents a high sensitivity dna detecting chip by taken particle-packed microarray as the solid carries for de novo dna synthesis. Microwell are wet etched on silicon chip, and the surface for binding sites are significantly increased by packing with silica microspheres. Meanwhile, high-density single strand dna (ssdna) molecules are de novo synthesized on the functionalized amino group on the surface instead of loosely immobilizing with exogenous primers. Synergistically, the fluorescence signal is enhanced after further hybridizing with fluorescent-labeled complementary probes. By packing a 700 μm microwell with 2.5 μm silica particles, the effective synthesis area was increased about two orders of magnitude. High intensity and uniform fluorescent signal from packed microwell was confirmed both by inverted fluorescence microscopy and laser confocal fluorescence microscopy. the proposed packed array can be used as sensitive biosensors for detecting biological dna, RNA and other antibodies. © 2022 IEEE.

关键词： dna

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An improved molecular computation model of integer power using self-assembly of dna tiles 20

An improved molecular computation model of integer power usi...

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20th IEEE international conference on High Performance computing and Communications (HPCC) / 16th IEEE international conference on Smart City (SmartCity) / 4th IEEE international conference on Data Science and Systems (DSS)

作者： Li, Yongnan Peoples Publ Secur Univ China Sch Criminal Invest & Counter Terrorism Beijing 100038 Peoples R China

ISBN: (纸本)9781538666142

this paper proposes how to use self-assembly of dna tiles to calculate integer power over finite field GF(2n) with less assembly processing time. Two key functional components accomplish the computing process. One of them computes modular-multiplication and modularsquare in parallel, and the other one calculates modularsquare and transmits intermediate result. It achieves better performance than previous work for its optimized assembly rules. this tile assembly model requires 5316 types of computation tiles and 12 types of boundary tiles.

关键词： Binary finite field Tile assembly model dna computing Integer power

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Meta-dna Structures 17

Meta-DNA Structures

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17th Annual conference on Foundations of Nanoscience: Self-Assembled Architectures and Devices, FNANO 2020

作者： Yao, Guangbao Zhang, Fei Liu, Hao Poppleton, Erik Šulc, Petr Fan, Chunhai Yan, Hao School of Molecular Sciences and Center for Molecular Design and Biomimetics at Biodesign Institute Arizona State University TempeAZ85281 United States Frontiers Science Center for Transformative Molecules School of Chemistry and Chemical Engineering and Institute of Molecular Medicine Renji Hospital School of Medicine Shanghai Jiao Tong University Shanghai200240 China

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dna Origami Goniometer for single particle cryo-EM 17

DNA Origami Goniometer for single particle cryo-EM

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17th Annual conference on Foundations of Nanoscience: Self-Assembled Architectures and Devices, FNANO 2020

作者： Aksel, Tural Yu, Zanlin Cheng, Yifan Douglas, Shawn M. Department of Cellular and Molecular Pharmacology University of California San Francisco United States Department of Biochemistry and Biophysics University of California San Francisco United States

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One-dimensional staged self-assembly

One-dimensional staged self-assembly

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17th international conference on dna computing and molecular programming

作者： Demaine, Erik D. Eisenstat, Sarah Ishaque, Mashhood Winslow, Andrew MIT Comp Sci & Artificial Intelligence Lab Cambridge MA 02139 USA Tufts Univ Dept Comp Sci Medford MA 02155 USA

ISBN: (纸本)9783642236372

We introduce the problem of staged self-assembly of one-dimensional nanostructures, which becomes interesting when the elements are labeled (e.g., representing functional units that must be placed at specific locations). In a restricted model in which each operation has a single terminal assembly, we prove that assembling a given string of labels with the fewest steps is equivalent, up to constant factors, to compressing the string to be uniquely derived from the smallest possible context-free grammar (a well-studied O(log n)-approximable problem) and that the problem is NP-hard. Without this restriction, we show that the optimal assembly can be substantially smaller than the optimal context-free grammar, by a factor of even for binary strings of length n. Fortunately, we can bound this separation in model power by a quadratic function in the number of distinct glues or tiles allowed in the assembly, which is typically small in practice.

关键词： Context-free grammar Wang tile dna computing Complexity

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Microfluidic single-molecule nuclease digestion reveals rate-enhancing off-and-on molecular encountering function for site-specific dna break

Microfluidic single-molecule nuclease digestion reveals rate...

引用

17th international conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2013

作者： Onoshima, D. Kaji, N. Tokeshi, M. Baba, Y. FIRST Research Center for Innovative Nanobiodevices Nagoya University Japan Graduate School of Engineering Nagoya University Japan Faculty of Engineering Hokkaido University Japan Health Technology Research Center AIST Japan

ISBN: (纸本)9781632666246

An intermittent molecular encounter leading to a site-specific dna-break was unveiled under a limited protein's sliding-free condition. It reflects a transient molecular action by which the reaction rate and efficiency of restriction enzyme in bacterial cells is enhanced. this was experimentally verified for the first time in the world by using our microfluidic device.

关键词： Microfluidics

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