Emergent phenomena in living systems, including your ability to read these lines, do not obviously follow as a consequence of the fundamental laws of physics. Understanding the physics of living systems clearly falls ...
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We carry out generalized-ensemble molecular dynamics simulations of the formation of small helium (He) clusters in bulk tungsten (W), a process of practical relevance for fusion energy production. We calculate formati...
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In this work we investigate the effect of bending stiffness on a homopolymer inside a spherical confinement. In particular we are interested in the collapse transition and its dependence on the size of the confinement...
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Using numerical methods we discuss the effects of open boundary conditions on condensation phenomena in the zero-range process (ZRP) and transport processes with pair-factorized steady states (PFSS), an extended model...
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A software for managing simulation jobs and results, named "OACIS", is presented. It controls a large number of simulation jobs executed in various remote servers, keeps these results in an organized way, an...
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A model of dense hard sphere colloids building on simple notions of particle mobility and spatial coherence is presented and shown to reproduce results of experiments and simulations for key quantities such as the int...
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It is known that fixed boundary conditions modify the leading finite-size corrections for an L3 lattice in 3d at a first-order phase transition from 1/L3 to 1/L. We note that an exponential low-temperature phase degen...
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We report a brief performance study of the replica-exchange Wang-Landau algorithm, a recently proposed parallel realization of Wang-Landau sampling, using the 2D Ising model as a test case. the simulation time is foun...
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We show that leading zeros, i.e., isolated complex zeros of the canonical partition function near the positive real axis, are robust indicators of conformational transitions in finite macromolecular systems. For a fle...
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the proceedings contain 19 papers. the topics discussed include: display of probability densities for data from a continuous distribution;Lanczos-based low-rank correction method for solving the Dyson equation in inho...
the proceedings contain 19 papers. the topics discussed include: display of probability densities for data from a continuous distribution;Lanczos-based low-rank correction method for solving the Dyson equation in inhomogenous dynamical mean-field theory;a GPU approach to parallel replica-exchange polymer simulations;real-time quantum dynamics of a single spin 1/2 coupled to a spin bath;watersheds and explosive percolation;new development of Monte Carlo techniques for studying bottle-brush polymers;worms exploring geometrical features of phase transitions;transition matrices and time travel;statistical analysis for quantum adiabatic computations: quantum Monte Carlo annealing;how the maximum step size in Monte Carlo simulations should be adjusted;and accurate modeling approach for the structural comparison between monolayer polymer tubes and single-walled nanotubes.
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