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检索条件"任意字段=1st Workshop on the Gap between Visualization Research and Visualization Software, VisGap 2020"

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Towards Closing the gap of Medical visualization research and Clinical Daily Routine 1

Towards Closing the Gap of Medical Visualization Research an...

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1st workshop on the gap between visualization research and visualization software, visgap 2020

作者： Maack, Robin G.C. Saur, Dorothee Hagen, Hans Scheuermann, Gerik Gillmann, Christina University of Kaiserslautern Germany Leipzig University Medical Centre Germany Leipzig University Institute of Computer Science Germany

ISBN: (纸本)9783038681250

Medical visualization papers are constantly published throughout the last years, but many never make their way into clinical daily routine. In this manuscript we aim to examine the gap between visualization research and clinical daily routine and suggest a mechanism that can lead towards closing this gap. We first identify the actors involved in developing new medical visualization approaches and their different views in this process. Then we develop a software development process unifying all actors and their needs. In addition, we collect further barriers in the medical software development process. © 2020 The Author(s).

关键词： Clinical research

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visgap 2020 - gap between visualization research and visualization software

VisGap 2020 - Gap between Visualization Research and Visuali...

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1st workshop on the gap between visualization research and visualization software, visgap 2020

ISBN: (纸本)9783038681250

The proceedings contain 10 papers. The topics discussed include: lessons learned from large data visualization software development for the k computer;selecting and sharing multidimensional projection algorithms: a practical view;framing the challenges of operational and domain usage of volume visualization methods in ocean science;towards closing the gap of medical visualization research and clinical daily routine;participatory visualization design as an approach to minimize the gap between research and application;from research topic to industrial practice: an experience report;lessons learnt from developing visual analytics applications for adaptive prostate cancer radiotherapy;and tales from the trenches: developing sciview, a new 3D viewer for the ImageJ community.

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How the deprecation of Java applets affected online visualization frameworks - A case study 1

How the deprecation of Java applets affected online visualiz...

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1st workshop on the gap between visualization research and visualization software, visgap 2020

作者： Skrodzki, M. RIKEN ITHEMS Saitama Wako Japan

ISBN: (纸本)9783038681250

The JavaView visualization framework was designed at the end of the 1990s as a software that provides-among other services-easy, interactive geometry visualizations on web *** discuss how this and other design goals were met and present several applications to highlight the contemporary use-cases of the framework. However, as JavaView's easy web exports was based on Java Applets, the deprecation of this technology disabled one main functionality of the software. The remainder of the article uses JavaView as an example to highlight the effects of changes in the underlying programming language on a visualization toolkit. We discuss possible reactions of software to such challenges, where the JavaView framework serves as an example to illustrate development decisions. These discussions are guided by the broader, underlying question as to how long it is sensible to maintain a software. © 2020 The Author(s).

关键词： visualization

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From research Topic to Industrial Practice: An Experience Report 1

From Research Topic to Industrial Practice: An Experience Re...

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1st workshop on the gap between visualization research and visualization software, visgap 2020

作者： Gospodnetic, P. Rauhut, M. Hagen, H. Fraunhofer ITWM Germany University of Kaiserslautern Germany

ISBN: (纸本)9783038681250

Continuous technological progress requires both research and industry to work together. It is a necessity which cannot and should not be avoided. However, due to different interests of the two, it is often accompanied by various challenges. The inability to foresee and overcome the challenges can greatly impact the quality of collaboration results and thus chances of such results being used further by the industry. In this paper, we provide background on the topic and emphasize frequently discussed points. Focus of the work are industry-academia collaborations in applied computer science research such as visualization. For that purpose, a set of requirements is recognized and provided for both industry and research community. Further, we provide an overview of challenges recognized over years of experience from working in industry-academia collaborations. Together, the challenges indicate the gap between the industry and research which is inherently transferred further onto results of collaborative research. Finally, we discuss various possibilities for both industry and research to reduce the gap. © 2020 The Author(s).

关键词： Industrial research

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Framing the challenges of operational and domain usage of volume visualization methods in ocean science 1

Framing the challenges of operational and domain usage of vo...

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1st workshop on the gap between visualization research and visualization software, visgap 2020

作者： Bemis, K. Department of Marine and Coastal Sciences Rutgers University United States

ISBN: (纸本)9783038681250

Several case studies are used to explore why the adoption of visualization software, especially for the visualization of 3D timevarying ocean data, has lagged behind the development of visualization techniques. The development history of the Silver and Wang feature tracking for time-varying 3D volume data highlights the challenges of decadal scale development and support. The experiences of supporting operational use of processing and visualization for the COVIS oceanographic instrument suggest packaging and version control are far more critical than most users or developers in the ocean science community realize. Initial efforts to package feature extraction and skeletonization for a domain scientist lead to the realization that ease of configuration is critical to supporting scientific exploration, experimentation, and illustration. A consideration of the history of marching cubes focuses attention on the gap between the development of methods and the dissemination of fully mature software. These challenges can be framed succinctly as Discovery, Relevance, Adaptability for Ease of Usage, Input/Output Flexibility, Reliability, and Sustainability. The lessons learned here suggest the need for a more sustainable funding model, strong expectations for code dissemination and documentation, attention to the needs of users especially domain scientists, and greater visibility of code development efforts to end users. © 2020 The Author(s).

关键词： visualization

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Lessons Learned from Large Data visualization software Development for the K computer 1

Lessons Learned from Large Data Visualization Software Devel...

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1st workshop on the gap between visualization research and visualization software, visgap 2020

作者： Nonaka, Jorji Sakamoto, Naohisa RIKEN R-CCS Operations and Computer Technologies Division Japan Kobe University Graduate School of System Informatics Japan

ISBN: (纸本)9783038681250

High Performance Computing (HPC) always had a close relationship with visualization as we can remember the landmark report on "visualization in Scientific Computing", which was credited to have coined the term Scientific visualization (SciVis). K computer, a Japanese flagship HPC system, appeared in 2011 as the most powerful supercomputer in the Top500 list, and as other similar HPC systems in that ranking, it was designed to enable "Grand Challenge"scientific computing with unprecedented scale and size. RIKEN Center for Computational Science (RIKEN R-CCS) operated and provided the K computer's computational resources to the HPC community for almost 8 years until it was decommissioned in 2019. Considering that most of the scientific computing results were publicly presented in the form of visual images and movies, we can infer that the SciVis was widely applied for assisting the domain scientists with their end-to-end scientific computing workflows. In addition to the traditional visualization applications, various others large data visualization software development were conducted in order to tackle the increased size and amount of the simulation outputs. RIKEN R-CCS participated in some of these development and deployment dealing with several environmental and human factors. Although we have no precise statistics regarding the visualization software usage, in this paper, we would like to present some findings and lessons learned from the large data visualization software development in the K computer environment. © 2020 The Author(s).

关键词： Data visualization

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visualization in Notebook-style Interfaces 1

Visualization in Notebook-Style Interfaces

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1st workshop on the gap between visualization research and visualization software, visgap 2020

作者： Schmidt, J. Ortner, T. VRVis Zentrum für Virtual Reality und Visualisierung Forschungs-GmbH Vienna Austria

ISBN: (纸本)9783038681250

visualization research has always stressed the need for visual tools for data exploration and sense making. Despite the fact that many visualization technologies are available nowadays, their application in modern data science workflows is limited. One of the manifold reasons behind this is the development of visual analytics tools as standalone applications, featuring the complete pipeline from data loading to visualization. Other tools are targeted towards specific use cases (e.g., data wrangling), but to not provide standardized interfaces for import and export. This does not reflect the approach of stitching together several tools as it is employed in data science workflows nowadays. In this paper we outline the differences between standalone tools and notebook-style workflows for a specific use case for time series analysis. The outcomes demonstrate the benefits of notebookstyle interfaces for tracking the steps in a data analysis workflow in a narrative way, for reporting, and for collaboration. We therefore argue that not considering the current developments towards the increased application of notebook-style interfaces for data science will lead to a reduced application and acceptance of visualization techniques in these domains. We outline the barriers for the integration of visualization techniques in narrative workflows, and describe directions for future research. © 2020 The Author(s).

关键词： Time series analysis

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Participatory visualization Design as an Approach to Minimize the gap between research and Application 1

Participatory Visualization Design as an Approach to Minimiz...

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1st workshop on the gap between visualization research and visualization software, visgap 2020

作者： Jänicke, S. Kaur, P. Kúzmicki, P. Schmidt, J. IMADA University of Southern Denmark Odense Denmark Heinz Nixdorf Chair for Distributed Information Systems Friedrich Schiller University Jena Germany VRVis Zentrum für Virtual Reality und Visualisierung Forschungs-GmbH Vienna Austria

ISBN: (纸本)9783038681250

Despite acceptance in our field, many sophisticated visualization projects suffer from failing acceptance by the targeted audience. Though the reasons for this circumstance might be manifold, we argue that they align with the typical pitfalls of software development. On the one hand, stakeholders are often not or only marginally integrated in the visualization design process, on the other hand, the goals we follow as visualization scholars do often not align with the goals of the stakeholders, reducing them to data deliverers. We provide case studies reporting on finished and ongoing projects following a participatory design approach. Those projects are initiated by the needs from users in digital humanities, biodiversity research, sports analysis and data science, and our results indicate that participatory visualization design leads to mutual benefits, reducing the gap between research and application in the targeted domain. © 2020 The Author(s).

关键词： visualization

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System for storing and analyzing experimental MRI/fMRI data on the hybrilit heterogeneous platform 1

System for storing and analyzing experimental MRI/fMRI data ...

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1st workshop on Information Systems for the Radiation Biology Tasks, ISRB 2020

作者： Zuev, M.I. Enyagina, I.M. Joint Institute for Nuclear Research 6 Joliot-Curie st. Dubna Moscow Region141980 Russia NRC "Kurchatov Institute" 1 Akademika Kurchatova pl. Moscow123182 Russia

The article presents the first results on the development of an information system on the HybriLIT heterogeneous platform for storing and analyzing data of magnetic resonance imaging (MRI) and functional magnetic resonance imaging (fMRI). The major objective of the given information system is to create a storage for MRI/fMRI data, as well as to automate the processes of its processing and analysis with the possibility of subsequent visualization of the results. To date, a system module for working with MRI/fMRI of the human brain has been developed and is ready for use, and this article describes its architecture. The module will be used, in particular, for organizing practical classes within the training course on neuroimaging. When deploying the corresponding specialized software, the module can also be used to process and analyze MRI/fMRI data of the brain of monkeys, mice and other laboratory animals. The work is performed within collaboration between the Laboratory of Radiation Biology and the Laboratory of Information Technologies at JINR. Copyright © 2020 for this paper by its authors. Use permitted under Creative Commons License Attribution 4.0 International (CC BY 4.0).

关键词： Magnetic resonance imaging

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How Do Users Talk About software? Searching for Common Ground

How Do Users Talk About Software? Searching for Common Groun...

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Ethics in Requirements Engineering research and Practice (REthics), workshop on

作者： Barbara Paech Kurt Schneider Software Engineering Heidelberg University Heidelberg Germany Software Engineering Group Leibniz Universität Hannover Hannover Germany

ISBN: (数字)9781728183503

ISBN: (纸本)9781728183510

Current research on ethics in software engineering focuses on the values of stakeholders and their tradeoffs. While an under-standing of these values is very important, it is not sufficient for a discussion about ethical values between developers and users or in society in general. Values need to be related to the functional and quality features of software. In this paper, we argue that we need a better understanding of the user view of software as a common ground for any discussion about the effects of software for its users. When users talk about software, compare its features, or complain about its usability, they do not use the terminology and mental models of IT-experts. This hinders effective communication about software in society. However, one cannot expect users to talk like developers. In order to provide such a common ground, we propose to study user utterances and to define a so-called user view language which comprises the concepts and relationships with which users describe the outside view of software. In this position paper, we present assumptions and hypotheses related to defining such a language. Furthermore, we present first ideas how to study user utterances. This will help us to better under-stand the current situation: how do users talk about software?

关键词： software Ethics software engineering Cognitive science Unified modeling language Task analysis visualization

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