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PRIMA: a case study of using information visualization techniques for patient record analysis 02

PRIMA: a case study of using information visualization techn...

引用

Proceedings of the conference on visualization '02

作者： D. L. Gresh D. A. Rabenhorst A. Shabo S. Slavin IBM T.J. Watson Research Center IBM Haifa Research Laboratory Hadassah University Hospital

ISBN: (纸本)9780780374980

We have created an application, called PRIMA (Patient Record Intelligent Monitoring and analysis), which can be used to visualize and understand patient record data. It was developed to better understand a large collection of patient records of bone marrow transplants at Hadassah Hospital in Jerusalem, Israel. It is based on an information visualization toolkit, Opal, which has been developed at the IBM T.J. Watson Research Center. Opal allows intelligent, interactive visualization of a wide variety of different types of data. The PRIMA application is generally applicable to a wide range of patient record data, as the underlying toolkit is flexible with regard to the form of the input data. This application is a good example of the usefulness of information visualization techniques in the bioinformatics domain, as these techniques have been developed specifically to deal with diverse sets of often unfamiliar data. We illustrate several unanticipated findings which resulted from the use of a flexible and interactive information visualization environment.

关键词： information visualization medical records visualization bioinformatics

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A model for the visualization exploration process 02

A model for the visualization exploration process

引用

Proceedings of the conference on visualization '02

作者： T. J. Jankun-Kelly Kwan Liu Ma Michael Gertz University of California Davis

ISBN: (纸本)9780780374980

The current state of the art in visualization research places a strong emphasis on different techniques to derive insight from disparate types of data. However, little work has investigated the visualization process itself. The information content of the visualization process---the results, history, and relationships between those results---is addressed by this work. A characterization of the visualization process is discussed, leading to a general model of the visualization exploration process. The model, based upon a new parameter derivation calculus, can be used for automated reporting, analysis, or visualized directly. An XML-based language for expressing visualization sessions using the model is also described. These sessions can then be shared and reused by collaborators. The model, along with the XML representation, provides an effective means to utilize the information within the visualization process to further data exploration.

关键词： visualization process scientific and information visualization visualization systems visualization models XML collaboration

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Function-based 3D web visualization

Function-based 3D web visualization

引用

International conference on Cyberworlds

作者： Lai Feng Min A. Sourin K. Levinski Creative Technology Limited Singapore Nanyang Technological University Singapore

This paper describes how the web-based visualization can be greatly improved using the function-based shape modeling technique. The improvement is possible because the proposed function-defined VRML shape node allows the content creators to describe any complex models with relatively small functions compared to the large-size polygonal mesh based VRML nodes. These function-defined shapes can be used together with the common VRML shapes. The proposed node has a few implementations capable of visualizing geometric shapes defined with HyperFun language as well as in any proprietary function-defined data formal. For fast visualization of the function-defined shapes, we have developed an improved continuation polygonization algorithm specifically designed for VRML visualization. The design, the implementation details, and the application examples of the proposed node are discussed.

关键词： data visualization Shape Image reconstruction Surface reconstruction Solid modeling Internet Rendering (computer graphics) Layout Algorithm design and analysis Computer languages

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ISpace: interactive volume data classification techniques using independent component analysis

ISpace: interactive volume data classification techniques us...

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Pacific conference on Computer Graphics and Applications

作者： I. Takanashi E.B. Lum Kwan-Liu Ma S. Muraki Mitsubishi Electric Corporation Information Technology Research and Development Center Japan CIPIC University of California Davis CA USA CIPIC & Department of Computer Science University of California Davis USA National Institute for Advanced Industrial Science and Technology Tsukuba Japan

This paper introduces an interactive classification technique for volume data, called ISpace, which uses Independent Component analysis (ICA) and a multidimensional histogram of the volume data in a transformed space. Essentially, classification in the volume domain becomes equivalent to interactive clipping in the ICA space, which as demonstrated using several examples is more intuitive and direct for the user to classify data. The result is an opacity transfer function defined for rendering multivariate scalar volume data.

关键词： Independent component analysis Transfer functions Image segmentation Space technology Histograms Biomedical imaging data visualization Rendering (computer graphics) Biological materials Information technology

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Intelligent agents technology applied to tasks control in ICU telesupervision

Intelligent agents technology applied to tasks control in IC...

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Annual International conference of the IEEE Engineering in Medicine and Biology Society (EMBC)

作者： C. Dafonte A. Gomez A. Castro B. Arcay Department of Information and Communications Technologies University of A Coruna Spain

This work presents a telemedicine system for Intensive Care Units (ICUs). The system provides the real time acquisition and analysis of physiological data of patients, the graphical visualization of these data and their transmission to a central system charged with the collection and control of all the information concerning the patient, including knowledge based systems (KBS) for medical reasoning. For the distribution and control of various processing tasks, requested by the medical KBS or directly by physicians, we have developed a module based on intelligent agents technology that controls and distributes the tasks according to their priority and to the availability of resources between the interconnected computers.

关键词： Intelligent agent Medical control systems Knowledge based systems Telemedicine Real time systems data analysis Information analysis data visualization Centralized control Control systems

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PheGe, the platform for exploring genotype-phenotype relations on cellular and organism level

PheGe, the platform for exploring genotype-phenotype relatio...

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IEEE conference on Bioinformatics

作者： K. Seidl German Research Centre for Biotechnology (GBF) Brunswick Germany

One major challenge of bioinformatics is to extract biological information into a form that gives access to analyses and predictive models and that sheds new light on cellular and organism function. In order to approach automated network analysis on organism level the relational platform PheGe was generated. PheGe enables (a) presentation of cell-specific regulatory and metabolic pathways, (b) sorting and coordination of the various molecules, genes and reactions to their particular signaling systems, (c) visualization of signaling par distance, (d) organization of downstream events on a multicellular level, (e) recording and evaluation of pathological relevant data, (f) coordination of the aberrant genes and gene products into the various regulatory pathways balancing phenotypic patterns (g) modeling of cellular differentiation and finally (h) tracing of network components that balance differentiation programs.

关键词： Organisms Bioinformatics data mining Information analysis Predictive models Sorting Communication system signaling data visualization Pathology Cellular networks

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Visualizing the spatial and temporal distribution of user interaction data collected in three-dimensional virtual worlds

Visualizing the spatial and temporal distribution of user in...

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International conference on Information Visualisation (IV)

作者： K. Borner W.R. Hazlewood Sy-Miaw Lin SLIS Indiana University Bloomington IN USA

This paper reports work in progress on the analysis and visualization of the spatial and temporal distribution of user interaction data collected in three-dimensional (3D) virtual worlds. Two tools are introduced. The "WorldMapper" reads in a so-called propdump file and creates a 2D clickable map showing the layout of the world as well as interaction possibilities such as teleports and clickable web links. The second tool visualizes user interaction data such as navigation, chatting, and Web access activity overlaid on the world map. Resulting visualizations are meant to support social navigation, design evaluation and optimization, and the study of virtual communities. Both tools are demonstrated on a 19-person information treasure hunt for information in a 3D virtual world. The paper concludes with a discussion and an outlook.

关键词： data visualization Navigation Libraries Design optimization Usability data mining Collaboration Auditory system Software tools data analysis

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A new algorithm for multi-channel EEG signal analysis using mutual information

A new algorithm for multi-channel EEG signal analysis using ...

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International conference on Acoustics, Speech, and Signal Processing (ICASSP)

作者： Ahmed Al-Ani Mohamed Deriche Signal Processing Research Centre Queensland University of Technology Brisbane Australia

Electroencephalogram (EEG) signals have long been used for the analysis of brain activities and for the detection of abnormalities (such as seizures). More recently, and with advance of computer technology, we have seen new applications using EEG signals in the control of PC keyboards through BCIs (Brain Computer Interfaces). These EEG signals are normally collected through multi-sensors (8,12, or 16 channels). For proper interpretation of such data, several techniques have been proposed to extract features from the collected multi-channel data, then analyse them, or classify them into patterns. However, most existing techniques do not take into consideration the inherent relationship among features across channels. Here, we propose a scheme based on a hybrid information maximization concept (HIM) to process multi-channel data for optimal feature extraction. The experiments carried show a clear advantage of the approach over principal component and canonical correlation analysis.

关键词： Brain modeling Artificial neural networks Principal component analysis visualization Electroencephalography

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A radial focus+context visualization for multi-dimensional functions 02

A radial focus+context visualization for multi-dimensional f...

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Proceedings of the conference on visualization '02

作者： Sanjini Jayaraman Chris North Virginia Polytechnic Institute and State University Blacksburg VA

ISBN: (纸本)9780780374980

The analysis of multidimensional functions is important in many engineering disciplines, and poses a major problem as the number of dimensions increases. Previous visualization approaches focus on representing three or fewer dimensions at a time. This paper presents a new focus+context visualization that provides an integrated overview of an entire multidimensional function space, with uniform treatment of all dimensions. The overview is displayed with respect to a user-controlled polar focal point in the function's parameter space. Function value patterns are viewed along rays that emanate from the focal point in all directions in the parameter space, and represented radially around the focal point in the visualization. data near the focal point receives proportionally more screen space than distant data. This approach scales smoothly from two dimensions to 10-20, with a 1000 pixel range on each dimension.

关键词： visualization multidimensional functions

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Case study: a virtual environment for genomic data visualization 02

Case study: a virtual environment for genomic data visualiza...

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Proceedings of the conference on visualization '02

作者： R. Mark Adams Blaze Stancampiano Michael McKenna David Small Variagenics Inc. Cambridge MA Small Design Firm Inc. Cambridge MA

ISBN: (纸本)9780780374980

With the completion of the human genome sequence, and with the proliferation of genome-related annotation data, the need for scalable and more intuitive means for analysis becomes critical. At Variagenics and Small Design Firm, we have addressed this problem with a coherent three-dimensional space in which all data can be seen in a single context. This tool aids in integrating information at vastly divergent scales while maintaining accurate spatial and size relationships. Our visualization was successful in communicating to project teams with diverse backgrounds the magnitude and biological implication of genetic variation.

关键词： multi-scale model virtual environment data navigation 3-dimensional interaction human factors bioinformatics

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