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检索条件"任意字段=IEEE Computational Systems Bioinformatics Conference"
878 条 记 录,以下是781-790 订阅
排序:
Minimum redundancy feature selection from microarray gene expression data
Minimum redundancy feature selection from microarray gene ex...
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ieee conference on bioinformatics
作者: C. Ding H. Peng NERSC Division Lawrence Berkeley National Laboratory University of California Berkeley CA USA
Selecting a small subset of genes out of the thousands of genes in microarray data is important for accurate classification of phenotypes. Widely used methods typically rank genes according to their differential expre... 详细信息
来源: 评论
Analysis of the genetic potential and gene expression of microbial communities involved in the in situ bioremediation of uranium and harvesting electrical energy from organic matter
Analysis of the genetic potential and gene expression of mic...
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ieee conference on bioinformatics
作者: D. Lovley Department of Microbiology University of Massachusetts Amherst USA
The goal of this genomes-to-life project is to develop models that can describe the functioning of the microbial communities involved in the in situ bioremediation of uranium-contaminated groundwater and harvesting el... 详细信息
来源: 评论
A statistical model of proteolytic digestion
A statistical model of proteolytic digestion
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ieee conference on bioinformatics
作者: I.-J. Wang C.P. Diehl F.J. Pineda Research & Technology Development Center Johns Hopkins University-Applied Physics Laboratory USA Department of Molecular Microbiology & Immunology Johns Hopkins Bloomberg School of Public Health USA
We present a stochastic model of proteolytic digestion of a proteome, assuming the distribution of parent protein lengths in the proteome, the relative abundances of the 20 amino acids in the proteome, and the digesti... 详细信息
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The SCP and compressed domain analysis of biological sequences
The SCP and compressed domain analysis of biological sequenc...
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ieee conference on bioinformatics
作者: D. Adjeroh J. Feng Lane Department of Compiter Science and Electrical Engineering West Virginia University Morgantown WV USA
We introduce the SCP - the sorted common prefix, and study some of its properties. Based on the internal representations used by a class of new compression schemes, we show how the SCP table can be constructed using a... 详细信息
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An SVM-based algorithm for identification of photosynthesis-specific genome features
An SVM-based algorithm for identification of photosynthesis-...
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ieee conference on bioinformatics
作者: G.-X. Yu G. Ostrouchov A. Geist N.F. Samatova Computational Biology Group Computer Science and Mathematics Division Oak Ridge National Laboratory Oak Ridge TN USA
This paper presents a novel algorithm for identification and functional characterization of "key" genome features responsible for a particular biochemical process of interest. The central idea is that indivi... 详细信息
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The approximate algorithm for analysis of the strand separation transition in superhelical DNA using nearest neighbor energetics
The approximate algorithm for analysis of the strand separat...
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ieee conference on bioinformatics
作者: C. Bi C.J. Benham UC Davis Genome Center University of California Davis CA USA
We present a computational method to analyze the propensity of superhelically stressed DNA to undergo strand separation events, as is required for the initiation of both transcription and replication. We build in sili... 详细信息
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Prokaryote phylogeny without sequence alignment: from avoidance signature to composition distance
Prokaryote phylogeny without sequence alignment: from avoida...
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ieee conference on bioinformatics
作者: Bailin Hao Ji Qi T-Life Research Center Fudan University Shanghai China Institute of Theoretical Physics Chinese Academy and Sciences Beijing China
A new and essentially simple method to reconstruct prokaryotic phylogenetic trees from their complete genome data without using sequence alignment is proposed. It is based on the appearance frequency of oligopeptides ... 详细信息
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Algorithms for bounded-error correlation of high dimensional data in microarray experiments
Algorithms for bounded-error correlation of high dimensional...
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ieee conference on bioinformatics
作者: M. Koyuturk A. Grama W. Szpankowski Department of Computer Sciences Purdue University West Lafayette IN USA
The problem of clustering continuous valued data has been well studied in literature. Its application to microarray analysis relies on such algorithms as k-means, dimensionality reduction techniques, and graph-based a... 详细信息
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Microbial functional genomics: pulling together a variety of approaches and concepts
Microbial functional genomics: pulling together a variety of...
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ieee conference on bioinformatics
作者: J.-M. Claverie Institut de Biologie Structurale et Microbiologie Marseilles France
With the human and mouse genome sequences behind us, whole microbial genome sequencing has become the most active area in genomics today. As easy targets have been worked on first, the microbes under scrutiny today ar... 详细信息
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A contradiction-based framework for testing gene regulation hypotheses
A contradiction-based framework for testing gene regulation ...
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ieee conference on bioinformatics
作者: S. Racunas N. Shah N.V. Fedoroff Pennsylvania State University USA
We have developed a mathematical framework for representing and testing hypotheses about gene, protein, and signaling molecule interactions. It takes a hierarchical, contradiction-based approach, and can make use of m... 详细信息
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