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Multi-layer prefetching for hybrid storage systems: Algorithms, models, and evaluations

Multi-layer prefetching for hybrid storage systems: Algorith...

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international Workshop on Scheduling and Resource Management for parallel and distributed systems

作者： Nijim, Mais Zong, Ziliang Qin, Xiao Nijim, Yousef Department of Electrical Engineering and Computer Science Texas A and M University-Kingsville Kingsville TX United States Department of Mathematics and Computer Science South Dakota School of Mines and Technology Rapid City SD United States Department of Computer Science and Software Engineering Auburn University Auburn AL United States Cox Communications Atlanta GA United States

ISBN: (纸本)9780769541570

parallel storage systems have been highly scalable and widely used in support of data-intensive applications. In future systems with the nature of massive data processing and storing, hybrid storage systems opt for a solution to fulfill a variety of demands such as large storage capacity, high I/O performance and low cost. Hybrid storage systems (HSS) contain both high-end storage components (e.g. solid-state disks and hard disk drives) to guarantee performance, and low-end storage components (e.g. tapes) to reduce cost. In HSS, transferring data back and forth among solid-state disks (SSDs), hard disk drives (HDDs), and tapes plays a critical role in achieving high I/O performance. Prefetching is a promising solution to reduce the latency of data transferring in HSS. However, prefetching in the context of HSS is technically challenging due to an interesting dilemma: aggressive prefetching is required to efficiently reduce I/O latency, whereas overaggressive prefetching may waste I/O bandwidth by transferring useless data from HDDs to SSDs or from tapes to HDDs. To address this problem, we propose a multi-layer prefetching algorithm that can judiciously prefetch data from tapes to HDDs and from HDDs to SSDs. To evaluate our algorithm, we develop an analytical model and the experimental results reveal that our prefetching algorithm improves the performance in hybrid storage systems. © 2010 IEEE.

关键词： Hard disk storage

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Coordination of multiple distributed design chains based on congestion games model

Coordination of multiple distributed design chains based on ...

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40th international Conference on Computers and Industrial engineering, CIE40 2010

作者： Lin, Shyh-Ming Chang, Feng-Cheng Department of Industrial Management National Pingtung University of Science and Technology Pingtung Taiwan

ISBN: (纸本)9781424472956

NPD (New Product Development) is the most important stage in product life cycle in that NPD determines 80% of product cost. An NPD process is composed of certain parallel and sequential activities, which are fulfilled by a core company and some distributed satellite companies. Companies involved in NPD activities form design chains that usually operate concurrently. Facing a highly market oriented and quickly changing business environment, companies in design chains must frequently adjust themselves to deal with uncertainties. In distributed design chain network, core companies, loosely coupled with satellites, pursue individual maximum benefits subject to satellites' bounded capacities. Conflicts therefore are likely to occur once any uncertainty happens. With no coordination mechanism, such conflicts will delay the product launch and cost companies their competitive positions. This study tries to solve the conflict problem by proposing a coordination mechanism. To build the mechanism, the congestion games model is adopted to formulate the design chain dynamic conflict problem, and then software agents are applied to implement it. This study takes an example to demonstrate the operation of the coordination mechanism, the demonstration finally are analyzed to discuss the performance of the proposed mechanism.

关键词： Life cycle

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Multicore-enabling the MPJ express messaging library 10

Multicore-enabling the MPJ express messaging library

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Proceedings of the 8th international Conference on the Principles and Practice of Programming in Java

作者： Shafi, Aamir Manzoor, Jawad Hameed, Kamran Carpenter, Bryan Baker, Mark School of Electrical Engineering and Computer Science National University of Sciences and Technology Islamabad Pakistan School of Computing University of Portsmouth United Kingdom School of Systems Engineering University of Reading United Kingdom

ISBN: (纸本)9781450302692

With the transition to multicore processors almost complete, the parallel processing community is seeking efficient ways to port legacy message passing applications on shared memory and multicore processors. MPJ Express is our reference implementation of Message Passing Interface (MPI)-like bindings for the Java language. Starting with the current release, the MPJ Express software can be configured in two modes: the multicore and the cluster mode. In the multicore mode, parallel Java applications execute on shared memory or multicore processors. In the cluster mode, Java applications parallelized using MPJ Express can be executed on distributed memory platforms like compute clusters and clouds. The multicore device has been implemented using Java threads in order to satisfy two main design goals of portability and performance. We also discuss the challenges of integrating the multicore device in the MPJ Express software. This turned out to be a challenging task because the parallel application executes in a single JVM in the multicore mode. On the contrary in the cluster mode, the parallel user application executes in multiple JVMs. Due to these inherent architectural differences between the two modes, the MPJ Express runtime is modified to ensure correct semantics of the parallel program. Towards the end, we compare performance of MPJ Express (multicore mode) with other C and Java message passing libraries - -including mpiJava, MPJ/Ibis, MPICH2, MPJ Express (cluster mode) - -on shared memory and multicore processors. We found out that MPJ Express performs signicantly better in the multicore mode than in the cluster mode. Not only this but the MPJ Express software also performs better in comparison to other Java messaging libraries including mpiJava and MPJ/Ibis when used in the multicore mode on shared memory or multicore processors. We also demonstrate effectiveness of the MPJ Express multicore device in Gadget-2, which is a massively parallel astrophysics N-body

关键词： Message passing

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Efficient hardware support for the Partitioned Global Address Space

Efficient hardware support for the Partitioned Global Addres...

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IEEE international symposium on parallel and distributed Processing Workshops and Phd Forum (IPDPSW)

作者： Holger Fröning Heiner Litz Computer Architecture Group Institute of Computer Engineering University of Heidelberg Mannheim Germany

ISBN: (纸本)9781424465330

We present a novel architecture of a communication engine for non-coherent distributed shared memory systems. The shared memory is composed by a set of nodes exporting their memory. Remote memory access is possible by forwarding local load or store transactions to remote nodes. No software layers are involved in a remote access, neither on origin or target side: a user level process can directly access remote locations without any kind of software involvement. We have implemented the architecture as an FPGA-based prototype in order to demonstrate the functionality of the complete system. This prototype also allows real world measurements in order to show the performance potential of this architecture, in particular for fine grain memory accesses like they are typically used for synchronization tasks.

关键词： Hardware Computer architecture Electronics packaging Engines distributed computing software prototyping Prototypes High performance computing Message passing Application software

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MIDI-based software for real-time network performances

MIDI-based software for real-time network performances

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作者： Yuan, Shengzhong Lu, Yongzhao He, Hong Management Centre of Network and Information Shandong University at Weihai Weihai China School of Information Engineering Shandong University at Weihai Weihai China

ISBN: (纸本)9780769543321

Realizing the software based on MIDI (Musical Instrument Digital Interface), with which MIDI instruments geographically distributed over Internet could be real-time played or synthetic performed. By access local MIDI input instruments to obtain signals, the software can help access local MIDI input instruments to implement local play. At the same time it can also obtain MIDI message in real-time and send signals through the Internet, synthesizing at a remote terminal to implement remote interactive performance. We use input buffer on a remote synthetic server to resolve the issue of network transmission delay. © 2010 IEEE.

关键词： Music

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On Modelling User Observations in the UTP

On Modelling User Observations in the UTP

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3rd international symposium on Unifying Theories of Programming

作者： Banks, Michael J. Jacob, Jeremy L. Univ York Dept Comp Sci York YO10 5DD N Yorkshire England

ISBN: (纸本)9783642166891

This paper presents an approach for modelling interactions between users and systems in the Unifying Theories of Programming.. Working in the predicate calculus, we outline generic techniques for calculating a user's observations of a system and, in turn, for identifying the information that a user Can deduce about the system's behaviour from those observations. To demonstrate how this approach can be applied in practical software development;we propose some alternative refinement relations that offer greater flexibility than classical refinement by utilising knowledge of the observational abilities of users.

关键词： UTP multi-user systems co-operating and independent refinement information flow distributed testing

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parallel computing algorithms for reverse-engineering and analysis of genome-wide gene regulatory networks from gene expression profiles

Parallel computing algorithms for reverse-engineering and an...

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9th international Workshop on parallel and distributed Methods in Verification, PDMC 2010 - Joint with the 2nd international Workshop on High-Performance Computational systems Biology, HiBi 2010

作者： Belcastro, Vincenzo Di Bernardo, Diego Gregoretti, Francesco Oliva, Gennaro Telethon Institute of Genetics and Medicine TIGEM Naples Italy Institute of High Performance Computing and Networking ICAR-CNR Naples Italy Open University PO Box 197 MK7 6BJ Milton Keynes United Kingdom Department of Systems and Computer Science Federico II University Naples Italy

ISBN: (纸本)9780769542652

A Gene Regulatory Network links pairs of genes through an edge if they physically or functionally interact. "Reverse engineering" a gene regulatory network means to infer the edges between genes from the available experimental data. Transcriptional responses (i.e. gene expression profiles obtained through microarray experiments) are often used to reverse-engineer a network of genes. Reverse-engineering consists in analyzing transcriptional responses to a set of treatments and adding an edge between genes if their expressions show a coordinated behavior on a subset of the treatments, according to some underlying model of gene regulation. Mammalian cells contain tens of thousands of genes, and it is necessary to analyze hundreds of transcriptional responses in order to have acceptable statistical evidence of interactions between genes. There currently exist several ready-to-use software packages able to infer gene networks, but few can be used to infer large-size networks from thousands of transcriptional responses as the dimension of the problem leads to high computational costs and memory requirements. We propose to exploit parallel computing techniques to overcome this problem. In this work, we designed and developed a parallel computing algorithm to reverse engineer large-scale gene regulatory networks from tens of thousands of gene expression profiles. The algorithm is based on computing pair-wise Mutual Information between each *** successfully tested it to infer the Mus Musculus (mouse) gene regulatory network in liver from 312 expression profiles collected from a public Internet repository. Each profile measures the expression of 45,101 genes (more specifically, transcripts). We analyzed all of the possible gene-pairs for a total amount of about 109 identifying about 6 · 107 edges. We used a hierarchical clustering algorithm to discover communities within the gene network, and found a modular structure that highlights genes involved in the same biolog

关键词： Reverse engineering

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A New Network Management System with Ontology-Supported Multi-agent Techniques

A New Network Management System with Ontology-Supported Mult...

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international symposium on parallel and distributed Processing with Applications, ISPA

作者： Sheng-Yuan Yang Yi-Yen Chang Department of Computer and Communication Engineering Saint John's University Taipei Taiwan Department of Electrical Engineering Saint John's University Taipei Taiwan

This paper presents a new network management system with ontology-supported multi-agent techniques. This technique derived from the ontology combining with related free software - Ethereal and Cacti which stored the operating information of network management perfectly into the backend database; furthermore, from the view of the fundamental functions of information agents, the system could sketch the four main components of network management systems with the technique of graphic monitoring multi-agent, which the system architecture consisted of an interface agent, a proxy agent, a monitoring agent, and a search agent. The experimental outcomes of the system prototype proved that the techniques implemented in this paper could not only precisely recognize error alarms but also indeed reduce the recovery time to 61% of traditional processing time for network troubleshooting.

关键词： Monitoring Ontologies Protocols Databases Computer architecture software Servers

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Application tuning through bottleneck-driven refactoring

Application tuning through bottleneck-driven refactoring

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IEEE international symposium on parallel and distributed Processing Workshops and Phd Forum (IPDPSW)

作者： Guogjing Cong I-Hsin Chung Huifang Wen David Klepacki Hiroki Murata Yasushi Negishi Takao Moriyama IBM Research GmbH China

ISBN: (纸本)9781424465330

To fully utilize the power of current high performance computing systems, high productivity to the end user is critical. It is a challenge to map an application to the target architecture efficiently. Tuning an application for high performance remains a daunting task, and frequently involves manual changes to the program. Recently refactoring techniques are proposed to rewrite or reorganize programs for various software engineering purposes. In our research we explore combining performance analysis with refactoring techniques for automated tuning that we expect to greatly improve the productivity of application deployment. We seek to build a system that can apply appropriate refactoring according to the bottleneck discovered. We demonstrate the effectiveness of this approach through the tuning of several scientific applications and kernels.

关键词： Optimizing compilers Application software Computer architecture High performance computing Productivity Performance analysis Program processors Runtime software engineering Kernel

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Mining performance regression testing repositories for automated performance analysis

Mining performance regression testing repositories for autom...

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10th international Conference on Quality software, QSIC 2010

作者： Foo, King Chun Jiang, Zhen Ming Adams, Bram Hassan, Ahmed E. Zou, Ying Flora, Parminder Department of Electrical and Computer Engineering Queen's University Kingston ON Canada School of Computing Queen's University Kingston ON Canada Performance Engineering Research In Motion Waterloo ON Canada

ISBN: (纸本)9780769541310

Performance regression testing detects performance regressions in a system under load. Such regressions refer to situations where software performance degrades compared to previous releases, although the new version behaves correctly. In current practice, performance analysts must manually analyze performance regression testing data to uncover performance regressions. This process is both time-consuming and error-prone due to the large volume of metrics collected, the absence of formal performance objectives and the subjectivity of individual performance analysts. In this paper, we present an automated approach to detect potential performance regressions in a performance regression test. Our approach compares new test results against correlations pre-computed performance metrics extracted from performance regression testing repositories. Case studies show that our approach scales well to large industrial systems, and detects performance problems that are often overlooked by performance analysts. © 2010 IEEE.

关键词： Regression analysis

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