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检索条件"任意字段=Proceedings - 2004 IEEE Computational Systems Bioinformatics Conference, CSB 2004"
371 条 记 录,以下是121-130 订阅
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Comparative analysis of gene expression and DNA copy number data for pancreatic and breast cancers using an orthogonal decomposition
Comparative analysis of gene expression and DNA copy number ...
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proceedings of the ieee computational systems bioinformatics conference, csb
作者: J.A. Berger S. Hautaniemi S.K. Mitra Department of Electrical and Computer Engineering University of California Santa Barbara CA USA Tampere International Center for Signal Processing Tampere University of Technology Tampere Finland
The causes of over-expression for many diseases are typically unknown, but current studies show that copy number aberrations may be strong candidates for driving gene overexpression. We present the use of the generali... 详细信息
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Positive sample only learning (PSOL) for predicting RNA genes in E. coli
Positive sample only learning (PSOL) for predicting RNA gene...
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proceedings of the ieee computational systems bioinformatics conference, csb
作者: R.F. Meraz Xiaofeng He C.H.Q. Ding S.R. Holbrook Physical Biosciences Division Lawrence Berkeley National Laboratory Berkeley CA USA Computational Research Division Lawrence Berkeley National Laboratory Berkeley CA USA
RNA genes lack most of the signals used for protein gene identification. A major shortcoming of previous discriminative methods to distinguish functional RNA (fRNA) genes from other non-coding genomic sequences is tha... 详细信息
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A finite model theory for biological hypotheses
A finite model theory for biological hypotheses
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proceedings of the ieee computational systems bioinformatics conference, csb
作者: S. Racunas C. Griffin N. Shah Pennslyvania State University University Park PA USA
We have designed and implemented a set of software tools for the composition and evaluation of hypotheses about gene regulation in biological systems. Our software uses a unified formal grammar for the representation ... 详细信息
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A novel computational framework for structural classification of proteins using local geometric parameter matching
A novel computational framework for structural classificatio...
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proceedings of the ieee computational systems bioinformatics conference, csb
作者: S. Dua N. Kandiraju Data Mining Research Laboratory Louisiana Tech University USA
The objective of this study was to develop a novel and fast computational framework for classification of proteins using a series of secondary structure geometric parameter represented by an unexplored dihedral angle ... 详细信息
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PoPS: a computational tool for modeling and predicting protease specificity
PoPS: a computational tool for modeling and predicting prote...
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proceedings of the ieee computational systems bioinformatics conference, csb
作者: S.E. Boyd M.G. de la Banda R.N. Pike J.C. Whisstock G.B. Rudy School of Computer Science & Software Engineering and Victorian Bioinformatics Consortium Monash University Melbourne VIC Australia Department of Biochemistry & Molecular Biology and Victorian Bioinformatics Consortium Monash University Melbourne VIC Australia Genetics & Bioinformatics Division Walter and Eliza Hall Institute of Medical Research Parksville VIC Australia
Proteases play a fundamental role in the control of intra- and extracellular processes by binding and cleaving specific amino acid sequences. Identifying these targets is extremely challenging. Current computational a... 详细信息
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Multi-knockout genetic network analysis: the Rad6 example
Multi-knockout genetic network analysis: the Rad6 example
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proceedings of the ieee computational systems bioinformatics conference, csb
作者: A. Kaufman M. Kupiec E. Ruppin Center of Neural Computation Hebrew University Jerusalem Israel School of Computer Science and School of Medicine Tel-Aviv University Tel-Aviv Israel
A novel and rigorous multi-perturbation shapley value analysis (MSA) method has been recently presented. The method addresses the challenge of defining and calculating the functional causal contributions of elements o... 详细信息
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FastR: fast database search tool for non-coding RNA
FastR: fast database search tool for non-coding RNA
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proceedings of the ieee computational systems bioinformatics conference, csb
作者: V. Bafna Shaojie Zhang Department of Computer Science and Engineering University of California San Diego La Jolla CA USA
The discovery of novel non-coding RNAs has been among the most exciting recent developments in biology. Yet, many more remain undiscovered. It has been hypothesized that there is in fact an abundance of functional non... 详细信息
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In silico construction of the carbon fixation pathway in Synechococcus sp. WH8102
In silico construction of the carbon fixation pathway in Syn...
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proceedings of the ieee computational systems bioinformatics conference, csb
作者: Phuongan Dam Zhengchang Su V. Olman Ying Xu Department of Biochemistry and Molecular Biology University of Georgia Athens USA Institute of Computational Biology Oak Ridge National Laboratory USA
Because the carbon fixation pathway plays an essential role in the primary production and natural carbon recycling process, and because the genome of the marine cyanobacterial Synechococcus sp. WH8102 (SYNWH8102) was ... 详细信息
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Exploring genomic context patterns for Rhodobacter sphaeroides in the HERBE knowledge discovery environment
Exploring genomic context patterns for Rhodobacter sphaeroid...
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proceedings of the ieee computational systems bioinformatics conference, csb
作者: H.J. Sofia A.L. Corrigan K.R. Klicker G. Chin E.G. Stephan Pacific Northwest National Laboratory Richland WA USA
Sophisticated information strategies are increasingly essential for biologists. We have built a powerful knowledge discovery resource using novel genomic context methods, interactive visualization strategies, and comp... 详细信息
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A self-tuning method for one-chip SNP identification
A self-tuning method for one-chip SNP identification
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proceedings of the ieee computational systems bioinformatics conference, csb
作者: M. Molla J. Shavlik T. Albert T. Richmond S. Smith University of Wisconsin Madison USA NimbleGen Systems Inc.
Current methods for interpreting oligonucleotide-based SNP-detection microarrays, SNP chips, are based on statistics and require extensive parameter tuning as well as extremely high-resolution images of the chip being... 详细信息
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