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A Comparison of a Large Language Model vs Manual Chart Review for the Extraction of Data Elements From the Electronic Health Record

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GASTROENTEROLOGY 2024年第4期166卷 707-709.e3页

作者： Ge, Jin Li, Michael Delk, Molly B. Lai, Jennifer C. Univ Calif San Francisco Div Gastroenterol & Hepatol Dept Med San Francisco CA USA Tulane Univ Sch Med Dept Med Sect Gastroenterol & Hepatol New Orleans LA USA Univ Calif San Francisco 513 Parnassus AveS-357 San Francisco CA 94143 USA

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A design and implementation of active network socket programming

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MICROPROCESSORS AND MICROSYSTEMS 2003年第5-6期27卷 277-284页

作者： Law, KLE Leung, R Univ Toronto Dept Elect & Comp Engn Toronto ON Canada

The concept of programmable nodes and active networks introduces programmability into communication networks. Code and data can be sent and modified on their ways to destinations. Recently, various research groups have designed and implemented their own execution platforms for active networks. Each design has its own benefits and drawbacks. Hence, there exist interoperability problems among them. Therefore in this paper, we introduce a concept that is similar to the socket programming for writing network programs. A set of simple interfaces, the Active Network Socket programming (ANSP), for programming active applications is established. The resulting active applications will be able to work on top of all other execution environments in future. The ANSP offers a concept that is similar to 'write once, run everywhere.' It is an open programming model that active applications can work on all execution environments. It solves the heterogeneity within the active networks. This is especially useful when active applications need to access all regions within a heterogeneous network to deploy special service at critical points or to monitor the performance of the entire networks. Instead of introducing a new platform, our approach provides a thin, transparent layer on top of existing environments that can be easily installed for all active applications. (C) 2003 Elsevier Science B.V. All rights reserved.

关键词： active networks active applications active network socket programming application programming interface execution environments

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Analysis of the Representation of Frequent Clinical Attributes in the Unified Medical Language System 19

Analysis of the Representation of Frequent Clinical Attribut...

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19th International Conference on Wearable Micro and Nano Technologies for Personalized Health (pHealth)

作者： Guengoer, Baris Deppenwiese, Noemi Mang, Jonathan M. Toddenroth, Dennis Univ Erlangen Nurnberg Med Informat Erlangen Germany Univ Hosp Erlangen Med Ctr Informat & Commun Technol Erlangen Germany

ISBN: (纸本)9781643683485;9781643683492

Mapping clinical attributes from hospital information systems to standardized terminologies may allow their scientific reuse for multicenter studies. The Unified Medical Language System (UMLS) defines synonyms in different terminologies, which could be valuable for achieving semantic interoperability between different sites. Here we aim to explore the potential relevance of UMLS concepts and associated semantic relations for widely used clinical terminologies in a German university hospital. To semi-automatically examine a sample of the 200 most frequent codes from Erlangen University Hospital for three relevant terminologies, we implemented a script that queries their UMLS representation and associated mappings via a programming interface. We found that 94% of frequent diagnostic codes were available in UMLS, and that most of these codes could be mapped to other terminologies such as SNOMED CT. We observed that all examined laboratory codes were represented in UMLS, and that various translations to other languages were available for these concepts. The classification that is most widely used in German hospital for documenting clinical procedures was not originally represented in UMLS, but external mappings to SNOMED CT allowed identifying UMLS entries for 90.5% of frequent codes. Future research could extend this investigation to other code sets and terminologies, or study the potential utility of available mappings for specific applications.

关键词： Unified Medical Language System Semantic Interoperability application programming interface

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HEGEL: a high-fidelity flexible software for hypersonics and plasma simulations

HEGEL: a high-fidelity flexible software for hypersonics and...

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AIAA SciTech Forum

作者： Munafo, Alessandro Kumar, Sajeev Jo, Sung Min Panesi, Marco Univ Illinois Ctr Hyperson & Entry Syst Studies Urbana IL 61801 USA Korea Adv Inst Sci & Technol Daejeon South Korea

ISBN: (数字)9781624107115

ISBN: (纸本)9781624107115

This work describes HEGEL (High-fidElity tool for maGnEto-gasdynamics simuLations) a high-fidelity and flexible software for hypersonics and plasma simulations. HEGEL is written in object-oriented fashion using modern Fortran 2008, and may be interfaced with other solvers for multi-physics calculations (e.g., plasma wind tunnel). The governing equations are discretized in space based on the cell-centered finite volume method. Time integration may be accomplished using explicit, implicit or implicit-explicit methods. Parallelization is realized through the combined use of MPI and PETSC libraries. For the purpose of a flexible implementation, the solver is designed by minimizing the dependency on the details of the fluid model, a feature which allows for treating calorically perfect gases, combustible mixtures as well as multi-component plasmas under either equilibrium or non-equilibrium conditions within the same tool. application examples are here presented to show the main capabilities of the solver.

关键词： Hypersonics Roe Approximate Riemann Solver Plasma Wind Tunnel application programming interface Kelvin Helmholtz Instability Finite Volume Method Freestream Conditions Taylor Green Vortex Computational Fluid Dynamics Thermodynamic Equilibrium

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Automatic Runtime Scheduling Via Directed Acyclic Graphs for CFD applications

Automatic Runtime Scheduling Via Directed Acyclic Graphs for...

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AIAA Aviation Forum

作者： Torres, Hilario C. Murman, Scott NASA Ames Res Ctr NASA Adv Supercomp Div Moffett Field CA 94035 USA

ISBN: (数字)9781624107047

ISBN: (纸本)9781624107047

The order of execution of computational kernels for Single-Program, Multiple-Data (SPMD) programs is usually determined at compile time. These static predetermined schedules can lead to performance issues at runtime, and are difficult to implement for inhomogeneous situations, such as variable-order or multi-physics applications. It is especially challenging to generate performant schedules when it is unknown whether specific kernels require execution, as a function of user inputs, or the kernel execution time changes dependent on the hardware. This paper presents a solution to this problem by dynamically scheduling computational kernels at runtime using directed acyclic graphs to track the data dependencies between kernels. This system is specifically designed to leverage existing computational infrastructure as much as possible, facilitating the extension to legacy applications. This scheduling system is demonstrated using the eddy high-order multi-physics solver developed at NASA. The details regarding the implementation, our experiences using this system, and performance are discussed.

关键词： NASA High Performance Computing Algorithms and applications application programming interface Sandia National Laboratories Molecular Dynamics Hydrodynamics NASA ames

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Enabling Large-scale Multidisciplinary Design Optimization through Adjoint Sensitivity Analysis

Enabling Large-scale Multidisciplinary Design Optimization t...

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AIAA Science and Technology (SciTech) Forum and Exposition

作者： Martins, Joaquim R. R. A. Kennedy, Graeme J. Univ Michigan Dept Aerosp Engn Ann Arbor MI 48109 USA Georgia Inst Technol Sch Aerosp Engn Atlanta GA 30332 USA

ISBN: (数字)9781624105784

ISBN: (纸本)9781624105784

This paper is written to honor Rafael T. Haftka's seminal contributions to the field of multidisciplinary design optimization. We focus on those contributions that had a direct impact on our research, namely: the adjoint method for computing derivatives, wing aerostructural design optimization, and architectures for multidisciplinary design optimization. For each of these topics, we describe Haftka's contributions, how they impacted our research, and examples of what they enabled us to do. The overarching theme of the contributions and developments described in this paper is the efficient computation of derivatives, which together with gradient-based optimizers enables the optimization with respect to large numbers of design variables, even when using costly high-fidelity models.

关键词： Multidisciplinary Design Optimization Sensitivity Analysis Computing Structural Finite Elements Structural Optimization Aircraft Configurations application programming interface Blended Wing Body Aerodynamic Loads Structural Analysis

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DroMPI: Parallel Computation Over Drop Computing 24

DroMPI: Parallel Computation Over Drop Computing

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24th IEEE/ACM International Symposium on Cluster, Cloud, and Internet Computing (CCGrid)

作者： Grosu, George-Mircea Nistor, Silvia-Elena Ciobanu, Radu-Ioan Dobre, Ciprian Pop, Florin Natl Univ Sci & Technol Politehn Bucharest Bucharest Romania Natl Inst Res & Dev Informat ICI Bucharest Romania Acad Romanian Scientists Bucharest Romania

ISBN: (纸本)9798350377521;9798350377514

With the advancement of technology and the spread of multi-core systems, the need for parallelization arises and the interest in programming models is growing. At the same time, new distributed computing models have been proposed, being in fierce competition to obtain the highest possible performance. The Drop Computing Paradigm proposes the idea of decentralized computing over ad-hoc opportunistic networks of mobile and Edge devices. In this respect, the Drop Computing model does not only aim to achieve a minimum turnaround time but also to optimize other characteristics related to mobile devices, such as limited resources and opportunistic communication. Therefore, it is necessary to define a new programming model called DroMPI that intends to extend the capabilities of current parallel and distributed programming models, based on the Drop Computing paradigm. Therefore, the solution aims to develop a library that takes advantage of hardware capabilities in the interest of the Drop Computing paradigm and also provides programmers with a high-level programming interface. The library's features will be based on the Message Passing interface (MPI) standard, which will be responsible for inter-node parallelization. The name of the library, DroMPI, is an acronym for Drop Computing and MPI. The implementation of the model will be responsible for the management of communication between nodes and for providing an application programming interface (API) for the development of parallel applications in the Drop Computing paradigm.

关键词： Decentralized Computing Parallel Computation Drop Computing application programming interface MPI

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API as Method for Improving Robotic Process Automation 1

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20th International Conference on Business Process Management (BPM) / Business Process Management (BPM) Forum

作者： Prucha, Petr Skrbek, Jan Tech Univ Liberec Liberec Czech Republic

ISBN: (数字)9783031161681

ISBN: (纸本)9783031161681;9783031161674

Robotic process automation has been maturing with significant speed and organizations that started using RPA during the past years now automate the "low hanging fruit" with the best return on investment. The organizations strive to utilize RPA to get a higher value. However, the deployment of RPA on multiple processes is complex and demanding in terms of costs and resources. In this research, we focused on the reduction of the RPA bot duration by using the applications' API in the RPA automation. We compared the duration of RPA bots on three processes. The three processes were automated with RPA technology via GUI and also via API. The results indisputably show that using API in RPA automation has a positive impact on its duration. RPA bot using API was, in some cases, ten times faster than RPA bot using GUI. The average duration change of using API against GUI was in the interval from 84.01% to 91.87%. This change shows the enormous acceleration of RPA bot and the impactful benefits of the use of API in RPA automation of processes. We may thus conclude that API is a good complement to RPA automation. RPA developers and RPA architects should use API when it is possible for better utilization of RPA robots.

关键词： Robotic process automation application programming interface RPA standardization

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Computational ecosystems for data-driven medical genomics

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GENOME MEDICINE 2010年第9期2卷 1-2页

作者： Almeida, Jonas S. Univ Texas MD Anderson Canc Ctr Dept Bioinformat & Computat Biol Houston TX 77030 USA

In the path towards personalized medicine, the integrative bioinformatics infrastructure is a critical enabling resource. Until large-scale reference data became available, the attributes of the computational infrastructure were postulated by many, but have mostly remained unverified. Now that large-scale initiatives such as The Cancer Genome Atlas (TCGA) are in full swing, the opportunity is at hand to find out what analytical approaches and computational architectures are really effective. A recent report did just that: first a software development environment was assembled as part of an informatics research program, and only then was the analysis of TCGA's glioblastoma multiforme multi-omic data pursued at the multi-omic scale. The results of this complex analysis are the focus of the report highlighted here. However, what is reported in the analysis is also the validating corollary for an infrastructure development effort guided by the iterative identification of sound design criteria for the architecture of the integrative computational infrastructure. The work is at least as valuable as the data analysis results themselves: computational ecosystems with their own high-level abstractions rather than rigid pipelines with prescriptive recipes appear to be the critical feature of an effective infrastructure. Only then can analytical workflows benefit from experimentation just like any other component of the biomedical research program.

关键词： Glioblastoma Multiforme application programming interface Shared File System Data Analysis Module Cloud Computing Resource

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PARAMETRIC DATAMODEL FOR COLLABORATIVE PRELIMINARY AIRCRAFT ENGINE DESIGN

PARAMETRIC DATAMODEL FOR COLLABORATIVE PRELIMINARY AIRCRAFT ...

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AIAA Science and Technology Forum and Exposition (AIAA SciTech Forum)

作者： Reitenbach, S. Hollmann, C. Schmeink, J. Vieweg, M. Otten, T. Haessy, J. Siggel, M. German Aerosp Ctr DLR Inst Prop Technol D-51147 Cologne Germany German Aerosp Ctr DLR Simulat & Software Technol D-51147 Cologne Germany

ISBN: (数字)9781624106095

ISBN: (纸本)9781624106095

An essential aspect of the collaborative multidisciplinary preliminary design process of aircraft engines is the involvement of a large number of experts from different disciplines and the usage of numerous tools and workflows. This is a major challenge, especially in the area of data management, as large amounts of data are generated that have to be exchanged and traced via a multitude of interfaces. The purpose of the paper is to present an approach of a central data model as a vehicle for data management in collaborative aircraft engine preliminary design. The first part describes the general structure and abstract definition of the developed data model utilizing modeling languages. Subsequently, a detailed description of the geometric parameterization concerning important engine components and additional data structures follows. Besides the methodology, the software implementation to support this approach is presented in detail, including data serialization and data identification, as well as automated capturing and storage of provenance data throughout the design process. The functionality of the approach is demonstrated by means of examples derived from the preliminary engine design.

关键词： Aircraft Engine Design Data Management Aircraft Engines Recursive Algorithm application programming interface Aircraft Configurations Unified Modeling Language Turbofan Engines Computational Fluid Dynamics Extensible Markup Language

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