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Scooby-domain: prediction of globular domains in protein sequence

NUCLEIC ACIDS RESEARCH 2005年第Suppl.期33卷 W160-W163页

作者： George, RA Lin, K Heringa, J Vrije Univ Amsterdam Ctr Integrat Bioinformat IBIVU Fac Sci NL-1081 HV Amsterdam Netherlands Vrije Univ Amsterdam Fac Earth & Life Sci NL-1081 HV Amsterdam Netherlands Inparmat Ltd London W1T 2NU England European Bioinformat Inst Cambridge CB10 1SD England Natl Inst Med Res Div Math Biol London NW7 1AA England

Scooby-domain (sequence hydrophobicity predicts domains) is a fast and simple method to identify globular domains in protein sequence, based on the observed lengths and hydrophobicities of domains from proteins with known tertiary structure. The prediction method successfully identifies sequence regions that will form a globular structure and those that are likely to be unstructured. The method does not rely on homology searches and, therefore, can identify previously unknown domains for structural elucidation. Scooby-domain is available as a java applet at http:// ***/programs/scoobywww. It may be used to visualize local properties within a protein sequence, such as average hydrophobicity, secondary structure propensity and domain boundaries, as well as being a method for fast domain assignment of large sequence sets.

关键词： Amino Acid Sequence domains Hydrophobicity globular structure java applet Fasting domain boundaries Phyla Prediction methods

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Generating Interactive Learning Objects from Configurable Samples

Generating Interactive Learning Objects from Configurable Sa...

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International Conference on Mobile, Hybrid, and On-Line Learning

作者： Han, Peng Kraemer, Bernd J. Fern Univ Hagen Dept Math & Comp Sci D-58084 Hagen Germany

ISBN: (纸本)9781424433612

Pedagogically well-designed interactive learning objects (LOs) can help students to better understand complex concepts and processes. Such LOs can stimulate higher-level cognitive skills by involving students in interactive learning activities. The design and implementation of interactive LOs is, however, time-consuming and requires special skills. LOs are also often localized and tightly connected with particular educational scenarios, which strongly limits their reuse in different contexts. In this article, we present a methodology of developing and reusing interactive learning objects relying on a heuristic principle. It suggests keeping content and educational context separate at design time and connecting both facets of LOs only at reuse time. We illustrate this principle both for java applets and for interactive Flash animations. Building on top of Adobe's Flex technology, we also suggest to separate the design of generic Flash animation templates from the pedagogically motivated interaction logics. Three simple examples illustrate our method.

关键词： adaption generation reusable learning objects design year configurability flash animation Students flat surfaces java applet

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Simulation design in java for digital image processing

Simulation design in Java for digital image processing

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Conference on Advanced Topics in Optoelectronics, Microelectronics and Nanotechnologies III

作者： Kadar, M. Ileana, I. 1 Decembrie 1918 Univ Alba Iulia Alba Iulia Romania

This paper discusses the main steps in creating simulations for digital image processing. The basic theory that describes the behavior is presented with the basic parameters, the environment of the experiment, the lev... 详细信息

ISBN: (纸本)9780819467799

关键词： gaussian filters simulation java applet image processing

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GRcut: a modeling tool for nanoparticles including five-fold symmetries

GRcut: a modeling tool for nanoparticles including five-fold...

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Symposium on Progress and Future Prospects in Molecular Dynamics Simulation

作者： Ogawa, H. Natl Inst Adv Ind Sci & Technol RICS AIST Tsukuba Ibaraki 3058568 Japan

A new modeling tool GRcut was developed to be used for atomistic simulation of isolated nanoparticles. It generates atomic coordinates in crystalline nanoparticles with equivalent crystallographic surfaces. In addition to 32 crystallographic point groups, nine non-crystallographic point groups with five-fold symmetries are implemented for modeling icosahedral and decahedral clusters in a systematic way. Curved surfaces with spherical, ellipsoidal and cylindrical shapes in arbitrary orientation are also available. This software is useful as a pre-processing tool for molecular simulation on metallic clusters, quantum dots, or fullerenes in high symmetries. The GRcut is distributed as a java applet via the Internet to be used on web browsers.

关键词： nanoparticle five-fold rotation icosahedral cluster decahedral cluster java applet

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java Programming 24-Hour Trainer 1

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2011年

作者： Fain Yakov

ISBN: (数字)9781118058176

ISBN: (纸本)9780470889640

A unique book-and-video package presented by java guru Yakov Fain As one of the most popular software languages for building Web applications, java is often the first programming language developers learn. The latest version includes numerous updates that both novice and experienced developers need to know. With this invaluable book-and-video package, java authority Yakov Fain fully covers java?s new features as well as its language extensions, classes and class methods, and the Swing Application Framework. For each lesson that he discusses in the book, there is an accompanying instructional video to reinforce your learning *** include:Introducing java Eclipse IDE Object-Oriented Programming Class MethodsBack to java Basics Packages, Interfaces, and Encapsulation Programming with Abstract Classes and InterfacesIntroducing the Graphic User InterfaceEvent Handling in UIIntroduction to java applets Developing a Tic-Tac-Toe applet Developing a Ping-Pong Game Error Handling Introduction to Collections Introduction to Generics Working with Streams java Serialization Network ProgrammingProcessing E-Mails with java Introduction to Multi-Threading Digging Deeper into Concurrent Execution Working with Databases Using JDBC Swing with JTable Annotations and Reflection Remote Method Invocation java EE 6 Overview Programming with Servlets javaServer Pages Developing Web Applications with JSF Introducing JMS and MOM Introducing JNDIIntroduction to Enterprise javaBeansIntroduction to the java Persistence APIWorking with RESTful Web ServicesIntroduction to Spring MVC Framework Introduction to Hibernate Framework Bringing javaFX to the Mix java Technical Interviews Note: As part of the print version of this title, video lessons are included on DVD. For e-book versions, video lessons can be accessed at *** using a link provided in the interior of the e-book.?

关键词： java introduction to java java introduction java beginner guide beginner guide to java java programming language learning java learning java programming java???s new features java updates updates to java java video java dvd java lessons java examples java exercises java instructions yakov fain java web services java developer java programs java development java programming yakov fain java web applications java for beginners java training java programming for beginners java programming language learn java programming java programming training java web programming java programming tutorial java tutorial for beginners learn java java tutorial java training classes java web development java programming books java training course web application development java sample programs java code sun java java class java language java download java programmer java application learn java online java application development j2ee training java for dummies java update java basics java help java video training java online course java code examples sun java certification java video tutorials java program download example java programs java applet learn java script tutorial java download java script using java java programming programming with java

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Realization of Virtual Scene of Artillery Radar Based on VRML/java

Realization of Virtual Scene of Artillery Radar Based on VRM...

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ETP/IITA Conference on Telecommunication and Information (TEIN 2010)

作者： Shan Xianming Liu Binbin Guo Zhi Shenyang Artillery Acad Dept Elect Reconnaissance 12Pt Times New Roman Shenyang Liaoning Peoples R China Shenyang Artillery Acad Dept Self Propelled Gun Shenyang Liaoning Peoples R China

ISBN: (纸本)9789881824257

There are many difficulties in the operation training of certain type artillery radar, such as training field is limited, radar loss is serious, training outlay is expensive. To resolve the problem, a virtual scene of certain type artillery radar was realized based on VRML and java. The solution to a series of key techniques is discussed such as the framework of virtual scene, building of virtual scene. This paper studies the java technology with the research in depth in the usage of the technology of java realizing interactivity in virtual environment based on VRML and fashion that realizing interactivity of virtual object and user. The results show that the simulation system simulates the operation process of certain type artillery radar livingly and can meet the requirement of real time simulation.

关键词： VRML java applet artillery radar virtual scene EAI 3DSMAX

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Virtual education system for the C programming language

Virtual education system for the C programming language

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7th International Conference on Web Based Learning (ICWL 2008)

作者： Moon, Ilhyun Han, Saeron Choi, Kwansun Kim, Dongsik Jeon, Changwan Lee, Sunheum Jeon, Heunggu Electrical Communication Engineering SoonChunHyang University Information Communication Engineering SoonChunHyang University MiraeEnergy Tech. Co.

ISBN: (纸本)9783540850328

Web-based interactive learning is an important educational trend. In this paper, we implemented web-based virtual education courseware for the C programming language. It consists of two major components: a creative lecture component for students and an evaluation component for lecturers. The lecture component contains HTML-based lecture notes with creative multimedia content, such as flash movies and video clips, and an effective web-based compiler which compiles C programs at the server. These are submitted by students through the Web and the program returns their execution results to the students' PCs. There is also a submission component of a student's reports and an online examination. The administration and management system for attendance checking, report assignment, online examination and scoring, etc is implemented using web technologies such as HTML, java, java script, PHP and MySQL database. This system enables students to easily understand the content and programming techniques of the C programming language. It enables lecturers to achieve higher productivity, saving them time and labor.

关键词： web-based virtual education java applet web-based compiler PHP MySQL

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A Combined Virtual and Remote Laboratory for Microcontroller

A Combined Virtual and Remote Laboratory for Microcontroller

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2nd International Conference on Hybrid Learning and Education

作者： Choi, Kwansun Han, Saeron Kim, Sunghwan Kim, Dongsik Lim, Jongsik Ahn, Dal Jeon, Changwan Soonchunhyang Univ Dept Elect & Commun Engn Asan Choongnam Do South Korea

ISBN: (纸本)9783642036965

This paper describes a web-based combined laboratory for a 8051 microcontroller-related experiment which is, composed of a virtual lab and a real time remote laboratory Authorized users are allowed to have access to both labs Using a web browser. The virtual laboratory cooperates with the remote laboratory to help learners easily understand the principal concept,;and the process of complex experimental operations about the 8051 microcontroller. The former is implemented by java applets and Flash animations, and the latter network technologies Such as web-based compilation and socket communication, which enables remote experimental devices to be controlled by local learners. compensating for the lack of reality in the virtual experiment. The proposed laboratory provides learners with almost all the same advantages as a real lab environment.

关键词： 8051 microcontroller virtual laboratory remote laboratory combined laboratory java applet FLASH animation

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Exploration of Virtual Avatar Technology Based on VRML and java

Exploration of Virtual Avatar Technology Based on VRML and J...

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2nd International Workshop on Knowledge Discovery Data Mining

作者： Duan Xinyu Jiang Pin Duan Xinyu Anyang Normal Univ AYNU Media Res Inst Anyang City Henan Province Peoples R China

ISBN: (纸本)9780769535432

VRML is mainly used to make 3D user interface and to control dynamic display in real-time state. java is responsible for correspondence between Web browser and VRML scene, also for linkage with other information system section. Paper first introduced default VRML's invisible 3D viewer's avatar modeling. Then mainly discussed VRML and java combination, including VRML's deficiency in creating real-time data input and output for peripheral equipment;adopting EAI to create java applet for the purpose of real-time data correspondence between external application program and VRML scene nodes. EAI technology strategies, EAI operation mechanism, EAI four kinds of possible accessing type and its event transmit mechanism etc. contents are detailed formulated. Finally paper described a typical VRML avatar PROTO definition specification and its concrete avatar citation application example.

关键词： eai virtual avatar java applet vrml

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Embedded Network Management System Design Based on WEB

Embedded Network Management System Design Based on WEB

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International Conference on Signal Processing Systems (ICSPS 2009)

作者： Ma Ke Song Changxin Qinghai Normal Univ Network Ctr Inst Comp Informat & Technol Qinghai Peoples R China

ISBN: (纸本)9780769536545

This paper proposes and realizes the structure and realization method of an embedded network management system based on Web through intensive study and discussion of embedded network management technology based on Web. This structure and method expand the range of network management, apply network management to embedded devices, study and realize rich management functions based on limited embedded devices and sum up key techniques and strategies in realization on the whole and therefore this system has certain engineering value and theoretical value.

关键词： embedded Web network management system java applet

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