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检索条件"主题词=Protein Data Bank File"
28 条 记 录,以下是21-30 订阅
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Indel PDB: A database of structural insertions and deletions derived from sequence alignments of closely related proteins
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BMC BIOINFORMATICS 2008年 第1期9卷 293-293页
作者: Hsing, Michael Cherkasov, Artem Univ British Columbia Fac Grad Studies Bioinformat Grad Program Vancouver BC V5T 4S6 Canada Univ British Columbia Dept Med Div Infect Dis Fac Med Vancouver BC V5Z 3J5 Canada
Background: Insertions and deletions (indels) represent a common type of sequence variations, which are less studied and pose many important biological questions. Recent research has shown that the presence of sizable... 详细信息
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Molecular docking studies of dithionitrobenzoic acid and its related compounds to protein disulfide isomerase: computational screening of inhibitors to HIV-1 entry
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BMC BIOINFORMATICS 2008年 第12-Sup期9卷 S14-S14页
作者: Gowthaman, Uthaman Jayakanthan, Mannu Sundar, Durai Pondicherry Univ BTISnet Bioinformat Ctr Pondicherry India Indian Inst Technol Dept Biochem Engn & Biotechnol New Delhi 110016 India
Background: Entry of HIV-1 into human lymphoid requires activities of viral envelope glycoproteins gp120 and gp41, and two host-cell proteins, the primary receptor CD4 and a chemokine co-receptor. In addition, a third... 详细信息
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Domain-based small molecule binding site annotation
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BMC BIOINFORMATICS 2006年 第1期7卷 152-152页
作者: Snyder, KA Feldman, HJ Dumontier, M Salama, JJ Hogue, CWV Blueprint Initiat Toronto ON M5T 1K4 Canada Carleton Univ Dept Biol Ottawa ON K1S 5B6 Canada Mt Sinai Hosp Samuel Lunenfeld Res Inst Toronto ON M5G 1X5 Canada
Background: Accurate small molecule binding site information for a protein can facilitate studies in drug docking, drug discovery and function prediction, but small molecule binding site protein sequence annotation is... 详细信息
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Automated functional classification of experimental and predicted protein structures
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BMC BIOINFORMATICS 2006年 第1期7卷 278-278页
作者: Wang, Kai Samudrala, Ram Univ Washington Dept Microbiol Computat Genom Grp Seattle WA 98195 USA
Background: proteins that are similar in sequence or structure may perform different functions in nature. In such cases, function cannot be inferred from sequence or structural similarity. Results: We analyzed experim... 详细信息
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PDB-UF: database of predicted enzymatic functions for unannotated protein structures from structural genomics
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BMC BIOINFORMATICS 2006年 第1期7卷 53-53页
作者: von Grotthuss, M Plewczynski, D Ginalski, K Rychlewski, L Shakhnovich, EI Harvard Univ Dept Chem & Biol Chem Cambridge MA 02138 USA BioInfoBank Inst PL-60744 Poznan Poland Adam Mickiewicz Univ Dept Phys Bioinformat Unit PL-61614 Poznan Poland
Background: The number of protein structures from structural genomics centers dramatically increases in the protein data bank (PDB). Many of these structures are functionally unannotated because they have no sequence ... 详细信息
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Deriving Function From Structure
Deriving Function From Structure
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作者: Annabel E. Todd
The fold and biochemical activity of a protein are tightly coupled. Once a protein is characterized, it is usual to determine its structure in order to derive an atomic descrip- tion of its molecular mechanism. The fo... 详细信息
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MolTalk - a programming library for protein structures and structure analysis
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BMC BIOINFORMATICS 2004年 第1期5卷 39-39页
作者: Diemand, AV Scheib, H Univ Lausanne CH-1066 Epalinges Switzerland Swiss Inst Bioinformat CH-1066 Epalinges Switzerland Univ Geneva CH-1211 Geneva 4 Switzerland Ctr Med Univ Geneva Swiss Inst Bioinformat CH-1211 Geneva 4 Switzerland
Background: Two of the mostly unsolved but increasingly urgent problems for modern biologists are a) to quickly and easily analyse protein structures and b) to comprehensively mine the wealth of information, which is ... 详细信息
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STING Millennium Suite: integrated software for extensive analyses of 3d structures of proteins and their complexes
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BMC BIOINFORMATICS 2004年 第1期5卷 107-107页
作者: Higa, RH Togawa, RC Montagner, AJ Palandrani, JCF Okimoto, IKS Kuser, PR Yamagishi, MEB Mancini, AL Neshich, G Empresa Brasileira Pesquisa Agropecuaria Ctr Nacl Pesquisa Agropecuaria Campinas SP Brazil Empresa Brasileira Pesquisa Agropecuaria Embrapa Recursos Genet & Biotecnol Lab Bioinformat Brasilia DF Brazil
Background: The integration of many aspects of protein/DNA structure analysis is an important requirement for software products in general area of structural bioinformatics. In fact, there are too few software package... 详细信息
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