【目的】研究新疆阿克苏地区盐碱土样中细菌类群多样性和优势种群,及其与环境因子的相关性。【方法】采用基于16S rDNA的变性梯度凝胶电泳(Denaturing gradient gel electrophoresis,DGGE)、克隆测序和典型相关性分析(CCA)的方法。【结...
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【目的】研究新疆阿克苏地区盐碱土样中细菌类群多样性和优势种群,及其与环境因子的相关性。【方法】采用基于16S rDNA的变性梯度凝胶电泳(Denaturing gradient gel electrophoresis,DGGE)、克隆测序和典型相关性分析(CCA)的方法。【结果】优势菌群序列分析表明有29个序列属于未培养的微生物,其他43个序列分属细菌的9个目:粘球菌目(Myxococcales)、假单胞菌目(Pseudomonadales)、根瘤菌目(Rhizobiales)、芽孢杆菌目(Bacillales)、伯克氏菌目(Burkholderiales)、放线菌目(Actinomycetales)、海洋螺菌目(Oceanospirillales)、黄杆菌目(Flavobacteriales)、交替单胞菌目(Alteromonadales),21个属。【结论】新疆阿克苏地区土壤中的微生物丰富度非常高,存在大量的细菌类群,优势菌群不尽相同,盐碱土样中微生物群落结构与环境因子是密切相关的。
[Objective] The purpose of this study was to construct a vscC in-frame deletion mutant of Vibrio alginolyticus with no antibiotic resistance marker. [Method] The first vscC mutant molecules in vitro were generated by ...
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[Objective] The purpose of this study was to construct a vscC in-frame deletion mutant of Vibrio alginolyticus with no antibiotic resistance marker. [Method] The first vscC mutant molecules in vitro were generated by SOE-PCR and then lig- ated to a suicide vector pDM4 to construct a suicide recombinant vector pDM4- A vscC. To clone the recombinant vector, it was transformed to E. coli SY327 strain, and then positive clones were selected and proved by PCR analysis. After that, the pDM4-AvscC DNA was extracted in large numbers and transformed to the E. coil S17-1 strain that acted as a donor in bacterial conjugation using the heat shock method. The recombinant E. coli S17-1 strains then transferred the pDM4-AvscC to V. alginolyticus ZJ51-O by conjugation method; transconjugants were screened and selected sequentially using antibiotic selection strategy and sucrose based counter-selection system to find the suspected mutants wanted. Finally the putative mutants were identified by PCR and confirmed by sequencing analysis. [Result] ZJ51-OAvscC was successfully constructed. [Conclusion] This study laid foundation for further research on the function of vscC gene and molecular mechanism of type Ⅲ secretion system in V. alginolyticus. Simultaneously, by the effective method other unknown functional genes in V. alginolyticus genome would be researched.
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