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A fast rigid registration algorithm for medical images

Journal of Fiber Bioengineering and Informatics 2014年第3期7卷 409-418页

作者： Feng, Yuncong Li, Xiongfei Zhang, Xiaoli Ding, Tienan Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education Changchun China Department of Computer Science and Technology Changchun China

Image registration is a vital research branch in medical image processing and analysis. In this paper, we proposed a new framework for rigid medical image registration. It can also be regarded as a pre-processing of non-rigid image registration algorithms. The interest of the algorithm lies in its simplicity and high e±ciency. In the registration algorithm, we firstly segmented the reference image and °oat image into two parts: tissue parts and background parts. Then the centers of the two images were located through performing distance transform on the two segmented tissue images. Finally, we detected the longest radius of the two tissue regions, by which we determined the rotating angle. We tested the registration algorithm on dozens of medical images, and the experimental results show us that the algorithm is competent for medical image registration.

关键词： Image registration

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Error Formulas for Lagrange Projectors Determined by Cartesian Sets

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Journal of Systems Science & Complexity 2018年第4期31卷 1090-1102页

作者： LI Zhe ZHANG Shugong DONG Tian GONG Yihe School of Science Changchun University of Science and Technology Changchun 130022 China Key Laboratory of Symbolic Computation and Knowledge Engineering Jilin University Changchun 130012 China School of Mathematics Key Laboratory of Symbolic Computation and Knowledge Engineering (Ministry of Education) Jilin University Changchun 130012 China Northeast Electric Power University Jilin 132012 China School of Mathematics Jilin University Changchun 130012 China

This paper studies error formulas for Lagrange projectors determined by Cartesian sets. Cartesian sets are properly subgrids of tensor product grids. Given interpolated functions with all order continuous partial derivatives, the authors directly construct the good error formulas for Lagrange projectors determined by Cartesian sets. Owing to the special algebraic structure, such a good error formula is useful for error estimate.

关键词： Cartesian sets error formulas ideal interpolation multivariate polynomial interpolation

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AutoFE-Pointer: Auto-weighted feature extractor based on pointer network for DNA methylation prediction

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International Journal of Biological Macromolecules 2025年 311卷 143668页

作者： Feng, Xin Xin, Ruihao Wu, Jiezhang Zheng, Jiaxin Wang, Chenyan Yu, Cuinan School of Science Jilin Institute of Chemical Technology Jilin130000 China State Key Laboratory of Inorganic Synthesis and Preparative Chemistry College of Chemistry Jilin University Changchun130012 China College of Information and Control Engineering Jilin Institute of Chemical Technology Jilin130000 China College of Computer Science and Technology Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education Jilin University Changchun130012 China Civil Aviation General Hospital Beijing100123 China School of Engineering Westlake University Zhejiang Hangzhou310030 China Hunan Bojii Life Technology Co. Ltd. Hunan Province Changsha410000 China

DNA methylation is a critical epigenetic modification that plays a central role in gene regulation, cellular differentiation, and the development of various diseases, including cancers. Aberrant methylation patterns have emerged as both biomarkers and mechanistic drivers in pathogenesis, underscoring the urgent need for precise and efficient predictive tools. Although some deep learning techniques have advanced methylation prediction, most existing models are trained independently on single-species datasets. This species-specific approach limits efficiency because each model can only handle one dataset at a time, often at the expense of predictive performance. Additionally, the state-of-the-art deep learning models tend to have enormous parameter counts and computational overhead, making them impractical for integration into local offline software applications. To overcome these challenges, we propose AutoFE-Pointer, a lightweight and novel framework that harnesses an improved softened pointer network to dynamically extract and weight features from diverse DNA sequences. AutoFE-Pointer is designed to simultaneously process 17 different benchmark datasets spanning multiple species, achieving superior performance compared to models that are trained individually on single-species data. In doing so, it not only offers state-of-the-art predictive accuracy and robust cross-species generalization but also significantly reduces computational demands, facilitating its deployment in local offline environments. This breakthrough represents a significant advancement in the field of epigenetic modeling and computational biology. © 2025

关键词： Enterprise software

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Tuning the Learning Rate for Stochastic Variational Inference

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Journal of Computer Science & Technology 2016年第2期31卷 428-436页

作者： Xi-Ming Li Ji-Hong Ouyang College of Computer Science and Technology Jilin University Changchun 130000 China Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education Jilin University Changchun 130000 China

Stochastic variational inference （SVI） can learn topic models with very big corpora. It optimizes the variational objective by using the stochastic natural gradient algorithm with a decreasing learning rate. This rate is crucial for SVI; however, it is often tuned by hand in real applications. To address this, we develop a novel algorithm, which tunes the learning rate of each iteration adaptively. The proposed algorithm uses the Kullback-Leibler （KL） divergence to measure the similarity between the variational distribution with noisy update and that with batch update, and then optimizes the learning rates by minimizing the KL divergence. We apply our algorithm to two representative topic models： latent Dirichlet allocation and hierarchical Dirichlet process. Experimental results indicate that our algorithm performs better and converges faster than commonly used learning rates.

关键词： stochastic variational inference online learning adaptive learning rate topic model

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UAV Swarm-enabled Collaborative Post-disaster Communications in Low Altitude Economy via a Two-stage Optimization Approach

arXiv

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arXiv 2025年

作者： Zheng, Xiaoya Sun, Geng Li, Jiahui Wang, Jiacheng Wu, Qingqing Niyato, Dusit Jamalipour, Abbas College of Computer Science d Technology Jilin University Changchun130012 China Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education Jilin University Changchun130012 China College of Computing and Data Science Nanyang Technological University 639798 Singapore College of Computing and ta Science Nanyang Technological University 639798 Singapore Department of Electronic Engineering Shanghai Jiao Tong University Shanghai200240 China School of Electrical and Computer Engiering The University of Sydney SydneyNSW2006 Australia

The low-altitude economy (LAE), as a new economic paradigm, plays an indispensable role in cargo transportation, healthcare, infrastructure inspection, and especially post-disaster communication. Specifically, unmanned aerial vehicles (UAVs), as one of the core technologies of the LAE, can be deployed to provide communication coverage, facilitate data collection, and relay data for trapped users, thereby significantly enhancing the efficiency of post-disaster response efforts. However, conventional UAV self-organizing networks exhibit low reliability in long-range cases due to their limited onboard energy and transmit ability. Therefore, in this paper, we design an efficient and robust UAV-swarm enabled collaborative self-organizing network to facilitate post-disaster communications. Specifically, a ground device transmits data to UAV swarms, which then use collaborative beamforming (CB) technique to form virtual antenna arrays and relay the data to a remote access point (AP) efficiently. Then, we formulate a rescue-oriented post-disaster transmission rate maximization optimization problem (RPTRMOP), aimed at maximizing the transmission rate of the whole network. Given the challenges of solving the formulated RPTRMOP by using traditional algorithms, we propose a two-stage optimization approach to address it. In the first stage, the optimal traffic routing and the theoretical upper bound on the transmission rate of the network are derived. In the second stage, we transform the formulated RPTRMOP into a variant named V-RPTRMOP based on the obtained optimal traffic routing, aimed at rendering the actual transmission rate closely approaches its theoretical upper bound by optimizing the excitation current weight and the placement of each participating UAV via a diffusion model-enabled particle swarm optimization (DM-PSO) algorithm. Simulation results show the effectiveness of the proposed two-stage optimization approach in improving the transmission rate of the construct

关键词： Unmanned aerial vehicles (UAV)

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Improved CS Algorithm and its Application in Parking Space Prediction

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Journal of Bionic engineering 2020年第5期17卷 1075-1083页

作者： Rui Guo Xuanjing Shen Hui Kang College of Computer Science and Technology Jilin UniversityChangchun 130012China Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education Jilin UniversityChangchun 130012China

This paper simulates the cuckoo incubation process and flight path to optimize the Wavelet Neural Network(WNN)model,and proposes a parking prediction algorithm based on WNN and improved Cuckoo Search(CS)***,the initialization parameters are provided to optimize the WNN using the improved *** traditional CS algorithm adopts the strategy of overall update and evaluation,but does not consider its own information,so the convergence speed is very *** proposed algorithm employs the evaluation strategy of group update,which not only retains the advantage of fast convergence of the dimension-by-dimension update evaluation strategy,but also increases the mutual relationship between the nests and reduces the overall running ***,we use the WNN model to predict parking *** proposed algorithm is compared with six different heuristic algorithms in five *** experimental results show that the proposed algorithm is superior to other algorithms in terms of running time and accuracy.

关键词： wavelet neural network cuckoo search algorithm available parking spaces prediction bionic

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An Algorithm for the Discretization of an Ideal Projector

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Journal of Systems Science & Complexity 2016年第5期29卷 1400-1410页

作者： JIANG Xue ZHANG Shugong LI Zhe Institute of Mathematics Key Laboratory of Symbolic Computation and Knowledge Engineering (Ministry of Education) Jilin University Department of Applied Mathematics School of Science Changchun University of Science and Technology

Ideal interpolation is a generalization of the univariate Hermite interpolation. It is well known that every univariate Hermite interpolant is a pointwise limit of some Lagrange ***, a counterexample provided by Shekhtman Boris shows that, for more than two variables,there exist ideal interpolants that are not the limit of any Lagrange interpolants. So it is natural to consider: Given an ideal interpolant, how to find a sequence of Lagrange interpolants(if any) that converge to it. The authors call this problem the discretization for ideal interpolation. This paper presents an algorithm to solve the discretization problem. If the algorithm returns "True", the authors get a set of pairwise distinct points such that the corresponding Lagrange interpolants converge to the given ideal interpolant.

关键词： Discretization ideal interpolation Lagrange interpolation.

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Simultaneous Prediction for Multiple key Performance Indicators in Semiconductor Wafer Fabrication

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Chinese Journal of Electronics 2016年第6期25卷 1159-1165页

作者： CAO Zhengcai LIU Xuelian HAO Jinghua LIU Min College of Information Science and Technology Beijing University of Chemical Technology Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education Jilin University Department of Automation Tsinghua University

The prediction and key factors identification for lot Cycle time(CT) and Equipment utilization(EU) which remain the key performance indicators(KPI)are vital for multi-objective optimization in semiconductor manufacturing industry. This paper proposes a prediction methodology which predicts CT and EU simultaneously and identifies their key factors. Bayesian neural network(BNN) is used to establish the simultaneous prediction model for Multiple key performance indicators(MKPI),and Bayes theorem is key solution in model complexity controlling. The closed-loop structure is built to keep the stability of MKPI prediction model and the weight analysis method is the basis of identifying the key factors for CT and EU. Compared with Artificial neural network(ANN)and Selective naive Bayesian classifier(SNBC), the simulation results of the prediction method of BNN are proved to be more feasible and effective. The prediction accuracy of BNN has been obviously improved than ANN and SNBC.

关键词： Prediction for MKPI Cycle time Equipment utilization BNN key factors identification

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A NEW CASCADING FAILURE MODEL WITH DELAY TIME IN CONGESTED COMPLEX NETWORKS

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Journal of Systems Science and Systems engineering 2009年第3期18卷 369-381页

作者： Jian WANG Yanheng LIU Yu JIAO College of Computer Science and Technology Jilin University Changchun 130012 China Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education Jilin University Changchun 130012 China

Cascading failures often occur in congested complex networks. Cascading failures can be expressed as a three-phase process： generation, diffusion, and dissipation of congestion. Different from the betweenness centrality, a congestion function is proposed to represent the extent of congestion on a given node. Inspired by the restart process of a node, we introduce the concept of ＂delay time,＂ during which the overloaded node Cannot receive or forward any traffic, so an intergradation between permanent removal and nonremoval is built and the flexibility of the presented model is demonstrated. Considering the connectivity of a network before and after cascading failures is not cracked because the overloaded node are not removed from network permanently in our model, a new evaluation function of network efficiency is also proposed to measure the damage caused by cascading failures. Finally, we investigate the effects of network structure and size, delay time, processing ability, and traffic generation speed on congestion propagation. Cascading processes composed of three phases and some factors affecting cascade propagation are uncovered as well.

关键词： Complex networks cascading failures congestion effects propagation model

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An improved fruit fly optimization algorithm for solving traveling salesman problem

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Frontiers of Information Technology & Electronic engineering 2017年第10期18卷 1525-1533页

作者： Lan HUANG Gui-chao WANG Tian BAI Zhe WANG College of Computer Science and Technology Jilin University Changchun 130012 China Key Laboratory of Symbolic Computation and Knowledge Engineering (Jilin University) Ministry of Education Changchun 130012 China

The traveling salesman problem(TSP), a typical non-deterministic polynomial(NP) hard problem, has been used in many engineering applications. As a new swarm-intelligence optimization algorithm, the fruit fly optimization algorithm(FOA) is used to solve TSP, since it has the advantages of being easy to understand and having a simple implementation. However, it has problems, including a slow convergence rate for the algorithm, easily falling into the local optimum, and an insufficient optimization precision. To address TSP effectively, three improvements are proposed in this paper to improve FOA. First, the vision search process is reinforced in the foraging behavior of fruit flies to improve the convergence rate of FOA. Second, an elimination mechanism is added to FOA to increase the diversity. Third, a reverse operator and a multiplication operator are proposed. They are performed on the solution sequence in the fruit fly's smell search and vision search processes, respectively. In the experiment, 10 benchmarks selected from TSPLIB are tested. The results show that the improved FOA outperforms other alternatives in terms of the convergence rate and precision.

关键词： Traveling salesman problem Fruit fly optimization algorithm Elimination mechanism Vision search Operator

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