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检索条件"机构=Applied Mathematics and Computer Science Program"
278 条 记 录,以下是181-190 订阅
排序:
ReLSO: A Transformer-based Model for Latent Space Optimization and Generation of Proteins
arXiv
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arXiv 2022年
作者: Castro, Egbert Godavarthi, Abhinav Rubinfien, Julian Givechian, Kevin Bhaskar, Dhananjay Krishnaswamy, Smita Computational Biology and Bioinformatics Program Yale University New HavenCT06511 United States Department of Applied Mathematics Yale University New HavenCT06511 United States Department of Genetics Yale University New HavenCT06511 United States Department of Computer Science Yale University New HavenCT06511 United States
The development of powerful natural language models have increased the ability to learn meaningful representations of protein sequences. In addition, advances in high-throughput mutagenesis, directed evolution, and ne... 详细信息
来源: 评论
DIFFUSION CURVATURE FOR ESTIMATING LOCAL CURVATURE IN HIGH DIMENSIONAL DATA
arXiv
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arXiv 2022年
作者: Bhaskar, Dhananjay MacDonald, Kincaid Fasina, Oluwadamilola Thomas, Dawson Rieck, Bastian Adelstein, Ian Krishnaswamy, Smita Department of Genetics Yale School of Medicine New HavenCT United States Department of Mathematics Yale University New HavenCT United States Program for Applied Mathematics Yale University New HavenCT United States Department of Physics Yale University New HavenCT United States Institute of AI for Health Helmholtz Pioneer Campus Munich Germany Department of Computer Science Yale University New HavenCT United States Program for Computational Biology and Bioinformatics Yale University New HavenCT United States
We introduce a new intrinsic measure of local curvature on point-cloud data called diffusion curvature. Our measure uses the framework of diffusion maps, including the data diffusion operator, to structure point cloud... 详细信息
来源: 评论
A framework for relating neural activity to freely moving behavior
A framework for relating neural activity to freely moving be...
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Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)
作者: Justin D. Foster Paul Nuyujukian Oren Freifeld Stephen I. Ryu Michael J. Black Krishna V. Shenoy Department of Electrical Engineering University of Stanford Stanford CA USA Bioengineering and Stanford Medical School University of Stanford Stanford CA USA Division of Applied Mathematics Brown University Providence RI USA Department of Neurosurgery Palo Alto Medical Foundation Palo Alto CA USA Department of Computer Science Brown University Providence RI USA Departments of Electrical Engineering Bioengineering and Neurobiology Neurosciences Program Neurosciences Program University of Stanford Stanford CA USA
Two research communities, motor systems neuroscience and motor prosthetics, examine the relationship between neural activity in the motor cortex and movement. The former community aims to understand how the brain cont... 详细信息
来源: 评论
Autonomous Electron Tomography Reconstruction with Machine Learning
arXiv
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arXiv 2023年
作者: Millsaps, William Schwartz, Jonathan Di, Zichao Wendy Jiang, Yi Hovden, Robert Department of Nuclear Engineering & Radiological Sciences University of Michigan Ann ArborMI United States Department of Materials Science and Engineering University of Michigan Ann ArborMI United States Mathematics and Computer Science Division Argonne National Laboratory LemontIL United States Advanced Photon Source Facility Argonne National Laboratory LemontIL United States Applied Physics Program University of Michigan Ann ArborMI United States
This manuscript is published in Microscopy and Microanalysis (DOI: 10.1093/micmic/ozad083). Modern electron tomography has progressed to higher resolution at lower doses by leveraging compressed sensing methods that m... 详细信息
来源: 评论
Cloud-AC-OPF: Model reduction technique for multi-scenario optimal power flow via chance-constrained optimization
arXiv
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arXiv 2019年
作者: Frolov, Vladimir Roald, Line Chertkov, Michael Skolkovo Institute of Science and Technology Nobel Street 3 Moscow Region143026 Russia Electrical & Computer Engineering University of Wisconsin 1415 Engineering Drive MadisonWI53706 United States Center for Nonlinear Studies and Theoretical Division T-4 LANL Los AlamosNM87545 United States Program in Applied Mathematics University of Arizona TucsonAZ85721 United States
—Many practical planning and operational applications in power systems require simultaneous consideration of a large number of operating conditions or Multi-Scenario AC-Optimal Power Flow (MS-AC-OPF) solution. Howeve... 详细信息
来源: 评论
Dose Requirements for Fused Multi-Modal Electron Tomography
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Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada 2023年 第1期29卷 1968-1969页
作者: Manassa, Jason Schwartz, Jonathan Jiang, Yi Zheng, Huihuo Fessler, Jeffrey A. Wendy Di, Zichao Hovden, Robert Department of Materials Science and Engineering University of Michigan Ann Arbor MI United States Advanced Photon Source Facility Argonne National Laboratory Lemont IL United States Argonne Leadership Computing Facility Argonne National Laboratory Lemont IL United States Department of Electrical Engineering and Computer Science University of Michigan Ann Arbor MI United States Mathematics and Computer Science Division Argonne National Laboratory Lemont IL United States Applied Physics Program University of Michigan Ann Arbor MI United States
来源: 评论
Visualizing structure and transitions in high-dimensional biological data (vol 54, pg 781, 2019)
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NATURE BIOTECHNOLOGY 2020年 第1期38卷 108-108页
作者: Moon, Kevin R. van Dijk, David Wang, Zheng Gigante, Scott Burkhardt, Daniel B. Chen, William S. Yim, Kristina van den Elzen, Antonia Hirn, Matthew J. Coifman, Ronald R. Ivanova, Natalia B. Wolf, Guy Krishnaswamy, Smita Department of Mathematics and Statistics Utah State University Logan USA Cardiovascular Research Center section Cardiology Department of Internal Medicine Yale University New Haven USA Department of Computer Science Yale University New Haven USA School of Basic Medicine Qingdao University Qingdao China Yale Stem Cell Center Department of Genetics Yale University New Haven USA Computational Biology and Bioinformatics Program Yale University New Haven USA Department of Genetics Yale University New Haven USA Department of Computational Mathematics Science and Engineering Michigan State University East Lansing USA Department of Mathematics Michigan State University East Lansing USA Applied Mathematics Program Yale University New Haven USA Department of Genetics Center for Molecular Medicine University of Georgia Athens USA Department of Mathematics and Statistics Université de Montréal Montréal Canada Mila—Quebec Artificial Intelligence Institute Montréal Canada
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
来源: 评论
Neural FIM for learning Fisher information metrics from point cloud data
arXiv
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arXiv 2023年
作者: Fasina, Oluwadamilola Huguet, Guillaume Tong, Alexander Zhang, Yanlei Wolf, Guy Nickel, Maximilian Adelstein, Ian Krishnaswamy, Smita Applied Math Program Yale University New HavenCT United States Mila - Quebec AI Institute MontrealQC Canada Department of Mathematics and Statistics Université de Montréal MontrealQC Canada Department of Computer Science and Operations Research Université de Montréal MontrealQC Canada FAIR Meta AI United States Department of Math Yale University New HavenCT United States Department of Computer Science Yale University New HavenCT United States Department of Genetics Yale University New HavenCT United States
Although data diffusion embeddings are ubiquitous in unsupervised learning and have proven to be a viable technique for uncovering the underlying intrinsic geometry of data, diffusion embeddings are inherently limited... 详细信息
来源: 评论
K, T and D-like fuzzy Kripke models
K, T and D-like fuzzy Kripke models
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Conference of the North American Fuzzy Information Processing Society - NAFIPS
作者: Benjamin Bedregal Regivan H. N. Santiago Mario Benevides Petrúcio Viana Group of Logic Language Information Theory and Applications-LoLITA Department of Informatics and Applied Mathematics Federal University of Rio Grande do Norte Natal Rio Grande do Norte Brazil Program of Engineering of Systems and Computing-PESC Department of Computer Science Federal University of Rio de Janeiro Rio de Janeiro Rio de Janeiro Brazil Department of Analysis Fluminense Federal University (UFF) Niteroi Rio de Janeiro Brazil
The idea of a Kripke semantics endowed with possibility/plausibility information is not new; in fact there are different approaches for that; see: [6], [13], [16], [19]. This paper follows the approach found in [6], b... 详细信息
来源: 评论
Collective behavior of active topological solitons, knotted streamlines, and transport of cargo in liquid crystals
arXiv
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arXiv 2017年
作者: Sohn, Hayley R.O. Ackerman, Paul J. Boyle, Timothy J. Sheetah, Ghadah H. Fornberg, Bengt Smalyukh, Ivan I. Soft Materials Research Center and Materials Science and Engineering Program University of Colorado BoulderCO80309 United States Department of Physics Department of Electrical Computer and Energy Engineering University of Colorado BoulderCO80309 United States Department of Applied Mathematics University of Colorado BoulderCO80309 United States Renewable and Sustainable Energy Institute National Renewable Energy Laboratory University of Colorado BoulderCO80309 United States
Active colloids and liquid crystals are capable of locally converting the macroscopically-supplied energy into directional motion and promise a host of new applications, ranging from drug delivery to cargo transport a... 详细信息
来源: 评论