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arXiv 2021年

作者： Reeb, Nico Hutschenreuter, S. Zehetner, P. Ensslin, T. Albert, A. Alves, S. André, M. Anghinolfi, M. Anton, G. Ardid, M. Aubert, J.-J. Aublin, J. Baret, B. Basa, S. Belhorma, B. Bendahman, M. Bertin, V. Biagi, S. Bissinger, M. Boumaaza, J. Bouta, M. Bouwhuis, M.C. Brânzaş, H. Bruijn, R. Brunner, J. Busto, J. Caiffi, B. Capone, A. Caramete, L. Carr, J. Carretero, V. Celli, S. Chabab, M. Chau, T.N. Chiarusi, T. Circella, M. Coleiro, A. Colomer-Molla, M. Coniglione, R. Coyle, P. Creusot, A. Díaz, A.F. de Wasseige, G. Deschamps, A. Distefano, C. Di Palma, I. Domi, A. Donzaud, C. Dornic, D. Drouhin, D. van Eeden, T. Enzenhöfer, A. Fermani, P. Ferrara, G. Filippini, F. Fusco, L. Gatelet, Y. Gay, P. Glotin, H. Gozzini, R. Ruiz, R. Gracia Graf, K. Guidi, C. Hallmann, S. van Haren, H. Heijboer, A.J. Hello, Y. Hernández-Rey, J.J. Hößl, J. Hofestädt, J. Huang, F. Illuminati, G. James, C.W. Jisse-Jung, B. de Jong, M. de Jong, P. Jongen, M. Kadler, M. Kalekin, O. Katz, U. Khan-Chowdhury, N.R. Kouchner, A. Kreykenbohm, I. Kulikovskiy, V. Lahmann, R. Le Breton, R. Lefèvre, D. Leonora, E. Levi, G. Lincetto, M. Lopez-Coto, D. Loucatos, S. Maderer, L. Manczak, J. Marcelin, M. Margiotta, A. Marinelli, A. Martínez-Mora, J.A. Melis, K. Migliozzi, P. Moussa, A. Muller, R. Nauta, L. Navas, S. Nezri, E. Fearraigh, B.Ó. Organokov, M. Pavalaş, G.E. Pellegrino, C. Perrin-Terrin, M. Piattelli, P. Pieterse, C. Poirè, C. Popa, V. Pradier, T. Randazzo, N. Reck, S. Riccobene, G. Romanov, A. Sánchez-Losa, A. Greus, F. Salesa Samtleben, D.F.E. Sanguineti, M. Sapienza, P. Schnabel, J. Schumann, J. Schüssler, F. Spurio, M. Stolarczyk, Th. Taiuti, M. Tingay, S.J. Vallage, B. van Elewyck, V. Versari, F. Viola, S. Vivolo, D. Wilms, J. Zavatarelli, S. Zegarelli, A. Zornoza, J.D. Zúñiga, J. Information Field Theory Group Max Planck Institute for Astrophysics Garching Germany Informatics 6 Chair of Robotics Artificial Intelligence and Real time Systems Technical University of Munich Garching Germany Department of Astrophysics IMAPP Radboud University Nijmegen Nijmegen Netherlands Department of Physics Ludwig-Maximilians University Munich Germany CERN Geneva Switzerland Université de Strasbourg CNRS IPHC UMR 7178 StrasbourgF-67000 France Université de Haute Alsace MulhouseF-68200 France IFIC - Instituto de Física Corpuscular CSIC Universitat de València c/ Catedrático José Beltrán 2 Paterna ValenciaE-46980 Spain Technical University of Catalonia Laboratory of Applied Bioacoustics Rambla Exposició Vilanova i la Geltrú Barcelona08800 Spain INFN - Sezione di Genova Via Dodecaneso 33 Genova16146 Italy Friedrich-Alexander-Universität Erlangen-Nürnberg Erlangen Centre for Astroparticle Physics Erwin-Rommel-Str. 1 Erlangen91058 Germany Universitat Politècnica de València C/ Paranimf 1 Gandia46730 Spain Aix Marseille Univ CNRS IN2P3 CPPM Marseille France Université de Paris CNRS Astroparticule et Cosmologie ParisF-75013 France Aix Marseille Univ CNRS CNES LAM Marseille France National Center for Energy Sciences and Nuclear Techniques B.P.1382 RabatR. P. 10001 Morocco University Mohammed V in Rabat Faculty of Sciences 4 av. Ibn Battouta B.P. 1014 R.P. Rabat10000 Morocco Via S. Sofia 62 Catania95123 Italy University Mohammed I Laboratory of Physics of Matter and Radiations B.P.717 Oujda6000 Morocco Nikhef Science Park Amsterdam Netherlands Institute of Space Science Bucharest MagureleRO-077125 Romania Universiteit van Amsterdam Instituut voor Hoge-Energie Fysica Science Park 105 Amsterdam1098 XG Netherlands INFN - Sezione di Roma P.le Aldo Moro 2 Roma00185 Italy Dipartimento di Fisica Università La Sapienza P.le Aldo Moro 2 Roma00185 Italy LPHEA Faculty of Science - Semlali Cadi Ayyad University P.O

We develop a novel technique to exploit the extensive data sets provided by underwater neutrino telescopes to gain information on bioluminescence in the deep sea. The passive nature of the telescopes gives us the unique opportunity to infer information on bioluminescent organisms without actively interfering with them. We propose a statistical method that allows us to reconstruct the light emission of individual organisms, as well as their location and movement. A mathematical model is built to describe the measurement process of underwater neutrino telescopes and the signal generation of the biological organisms. The Metric Gaussian Variational Inference algorithm is used to reconstruct the model parameters using photon counts recorded by the neutrino detectors. We apply this method to synthetic data sets and data collected by the ANTARES neutrino telescope. The telescope is located 40 km off the French coast and fixed to the sea floor at a depth of 2475 m. The runs with synthetic data reveal that we can reliably model the emitted bioluminescent flashes of the organisms. Furthermore, we find that the spatial resolution of the localization of light sources highly depends on the configuration of the telescope. Precise measurements of the efficiencies of the detectors and the attenuation length of the water are crucial to reconstruct the light emission. Finally, the application to ANTARES data reveals the first precise localizations of bioluminescent organisms using neutrino telescope data. © 2021, CC BY.

关键词： Bioluminescence

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Identifying the best machine learning algorithms for brain tumor segmentation, progression assessment, and overall survival prediction in the BRATS challenge

arXiv

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arXiv 2018年

作者： Bakas, Spyridon Reyes, Mauricio Jakab, Andras Bauer, Stefan Rempfler, Markus Crimi, Alessandro Shinohara, Russell Takeshi Berger, Christoph Ha, Sung Min Rozycki, Martin Prastawa, Marcel Alberts, Esther Lipkova, Jana Freymann, John Kirby, Justin Bilello, Michel Fathallah-Shaykh, Hassan M. Wiest, Roland Kirschke, Jan Wiestler, Benedikt Colen, Rivka Kotrotsou, Aikaterini Lamontagne, Pamela Marcus, Daniel Milchenko, Mikhail Nazeri, Arash Weber, Marc-Andr Mahajan, Abhishek Baid, Ujjwal Gerstner, Elizabeth Kwon, Dongjin Acharya, Gagan Agarwal, Manu Alam, Mahbubul Albiol, Alberto Albiol, Antonio Albiol, Francisco J. Alex, Varghese Allinson, Nigel Amorim, Pedro H.A. Amrutkar, Abhijit Anand, Ganesh Andermatt, Simon Arbel, Tal Arbelaez, Pablo Avery, Aaron Azmat, Muneeza Pranjal, B. Bai, Wenjia Banerjee, Subhashis Barth, Bill Batchelder, Thomas Batmanghelich, Kayhan Battistella, Enzo Beers, Andrew Belyaev, Mikhail Bendszus, Martin Benson, Eze Bernal, Jose Bharath, Halandur Nagaraja Biros, George Bisdas, Sotirios Brown, James Cabezas, Mariano Cao, Shilei Cardoso, Jorge M. Carver, Eric N. Casamitjana, Adri Castillo, Laura Silvana Cat, Marcel Cattin, Philippe Cérigues, Albert Chagas, Vinicius S. Chandra, Siddhartha Chang, Yi-Ju Chang, Shiyu Chang, Ken Chazalon, Joseph Chen, Shengcong Chen, Wei Chen, Jefferson W. Chen, Zhaolin Cheng, Kun Choudhury, Ahana Roy Chylla, Roger Clrigues, Albert Colleman, Steven Colmeiro, Ramiro German Rodriguez Combalia, Marc Costa, Anthony Cui, Xiaomeng Dai, Zhenzhen Dai, Lutao Daza, Laura Alexandra Deutsch, Eric Ding, Changxing Dong, Chao Dong, Shidu Dudzik, Wojciech Eaton-Rosen, Zach Egan, Gary Escudero, Guilherme Estienne, Tho Everson, Richard Fabrizio, Jonathan Fan, Yong Fang, Longwei Feng, Xue Ferrante, Enzo Fidon, Lucas Fischer, Martin French, Andrew P. Fridman, Naomi Fu, Huan Fuentes, David Gao, Yaozong Gates, Evan Gering, David Gholami, Amir Gierke, Willi Glocker, Ben Gong, Mingming Gonzlez-Vill, Sandra Grosges, T. Guan, Yuanfang Guo, Sheng Gupta, Sudeep Han, Woo-Sup Han, Il Song Harmuth, Ko Center for Biomedical Image Computing and Analytics University of Pennsylvania PhiladelphiaPA United States Department of Radiology Perelman School of Medicine University of Pennsylvania PhiladelphiaPA United States Department of Pathology and Laboratory Medicine Perelman School of Medicine University of Pennsylvania PhiladelphiaPA United States Institute for Surgical Technology and Biomechanics University of Bern Bern Switzerland Center for MR-Research University Children's Hospital Zurich Zurich Switzerland Support Centre for Advanced Neuroimaging Inselspital Institute for Diagnostic and Interventional Neuroradiology Bern University Hospital Bern Switzerland University Hospital of Zurich Zurich Switzerland Center for Clinical Epidemiology and Biostatistics University of Pennsylvania Philadelphia United States Image-Based Biomedical Modeling Group Technical University of Munich Munich Germany Icahn School of Medicine Mount Sinai Health System New YorkNY United States Leidos Biomedical Research Inc. Frederick National Laboratory for Cancer Research FrederickMD21701 United States Cancer Imaging Program National Cancer Institute National Institutes of Health BethesdaMD20814 United States Department of Neurology University of Alabama at Birmingham BirminghamAL United States Department of Diagnostic Radiology University of Texas MD Anderson Cancer Center HoustonTX United States Department of Psychology Washington University St. LouisMO United States Neuroimaging Informatics and Analysis Center Washington University St. LouisMO United States Department of Radiology Washington University St. LouisMO United States Institute of Diagnostic and Interventional Radiology Pediatric Radiology and Neuroradiology University Medical Center Rostock Ernst-Heydemann-Str. 6 Rostock18057 Germany Tata Memorial Centre Homi Bhabha National Institute Mumbai India Shri Guru Gobind Singhji Institute of Engineering and Technology Nanded India NVIDIA Santa Clara

Gliomas are the most common primary brain malignancies, with different degrees of aggressiveness, variable prognosis and various heterogeneous histologic sub-regions, i.e., peritumoral edematous/invaded tissue, necrotic core, active and non-enhancing core. This intrinsic heterogeneity is also portrayed in their radio-phenotype, as their sub-regions are depicted by varying intensity profiles disseminated across multi-parametric magnetic resonance imaging (mpMRI) scans, reflecting varying biological properties. Their heterogeneous shape, extent, and location are some of the factors that make these tumors difficult to resect, and in some cases inoperable. The amount of resected tumor is a factor also considered in longitudinal scans, when evaluating the apparent tumor for potential diagnosis of progression. Furthermore, there is mounting evidence that accurate segmentation of the various tumor sub-regions can offer the basis for quantitative image analysis towards prediction of patient overall survival. This study assesses the state-of-the-art machine learning (ML) methods used for brain tumor image analysis in mpMRI scans, during the last seven instances of the International Brain Tumor Segmentation (BraTS) challenge, i.e., 2012-2018. Specifically, we focus on i) evaluating segmentations of the various glioma sub-regions in pre-operative mpMRI scans, ii) assessing potential tumor progression by virtue of longitudinal growth of tumor sub-regions, beyond use of the RECIST/RANO criteria, and iii) predicting the overall survival from pre-operative mpMRI scans of patients that underwent gross total resection. Finally, we investigate the challenge of identifying the best ML algorithms for each of these tasks, considering that apart from being diverse on each instance of the challenge, the multi-institutional mpMRI BraTS dataset has also been a continuously evolving/growing dataset. Copyright © 2018, The Authors. All rights reserved.

关键词： Tumors

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Editorial

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International Journal of Social robotics 2015年第1期7卷 1-2页

作者： Ge, Shuzhi Sam Khatib, Oussama and the Robotics Research Lab Department of Electrical & Computer Engineering The National University of Singapore Singapore Singapore University of Electronic Science and Technology of China Chengdu China Artificial Intelligence Laboratory Department of Computer Science Stanford University StanfordCA United States

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Multi-crease self-folding by global heating

Multi-crease self-folding by global heating

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作者： Miyashita, Shuhei Onal, Cagdas D. Rus, Daniela Computer Science and Artificial Intelligence Laboratory Massachusetts Institute of Technology 32 Vassar Street 32-379 CambridgeMA02139 United States Worcester Polytechnic Institute Department of Mechanical Engineering Robotics Engineering Program 100 Institute Rd. HL 105 WorcesterMA01609 United States

This study demonstrates a new approach to autonomous folding for the body of a 3D robot from a 2D sheet, using heat. We approach this challenge by folding a 0.27-mm sheetlike material into a structure. We utilize the thermal deformation of a contractive sheet sandwiched by rigid structural layers. During this baking process, the heat applied on the entire sheet induces contraction of the contracting layer and thus forms an instructed bend in the sheet. To attain the targeted folding angles, the V-fold spans method is used. The targeted angle θout can be kinematically encoded into crease geometry. The realization of this angle in the folded structure can be approximately controlled by a contraction angle θin. The process is non-reversible, is reliable, and is relatively fast. Our method can be applied simultaneously to all the folds in multi-crease origami structures. We demonstrate the use of this method to create a lightweight mobile robot. © 2015 Massachusetts Institute of Technology.

关键词： Self assembly

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Editorial

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International Journal of Social robotics 2014年第1期6卷 1-3页

作者： Ge, Shuzhi Sam Khatib, Oussama Social Robotics Laboratory Interactive Digital Media Institute The National University of Singapore Singapore Singapore The Robotics Institute University of Electronic Science and Technology of China Chengdu China Artificial Intelligence Laboratory Department of Computer Science Stanford University Stanford CA United States

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Development of a robotic prototype system for the preparation and partition of radioactive products

Development of a robotic prototype system for the preparatio...

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2015 IEEE International Conference on Industrial Technology, ICIT 2015

作者： Guevara, Gabriela Lima, José Leitão, Paulo Do Carmo Baptista, Maria Polytechnic Institute of Bragança Campus Sta Apolónia Apartado 1134 Bragança5301-857 Portugal Robotics and Intelligent Systems Rua Dr. Roberto Frias Porto4200-465 Portugal LIACC Artificial Intelligence and Computer Science Laboratory Rua Dr. Roberto Frias Porto4200-465 Portugal Medical Physics Department Dr. Campos Costa - Consultório T.C. SA. Rua de Avis 13 Porto4050-075 Portugal

ISBN: (纸本)9781479978007

The ionizing radiation is used in the nuclear medicine field during the execution of diagnosis exams. The continuous exposure of humans to the radiation may cause organs and tissues damage, being its severity dependent of the quantity of the radiation and the exposure time. The main objective of this work is to design a virtual environment to carry out the simulation of the several stages for the preparation of radioactive products based on the use of a robotic arm. In this work, the V-REP robotic simulation tool was used for the specification and development of the manipulation processes, without the need to consider the real manipulator, being timely and costly efficient. During this study, the preparation process of the dosages in the diagnostic exams was analyzed, being posteriorly translated into mechanical processes for a better perception. The materials and equipment needed were designed as virtual 3D models and posteriorly imported into the V-REP simulation platform in order to be distributed and programmed to achieve a closer approximation to reality. © 2015 IEEE.

关键词： Ionizing radiation

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Efficient incremental map segmentation in dense RGB-D maps

Efficient incremental map segmentation in dense RGB-D maps

引用

IEEE International Conference on robotics and Automation (ICRA)

作者： Ross Finman Thomas Whelan Michael Kaess John J. Leonard Computer Science and Artificial Intelligence Laboratory (CSAIL) Massachusetts Institute of Technology (MIT) Cambridge MA USA Department of Computer Science National University of Ireland Maynooth Ireland Robotics Institute Carnegie Mellon University Pittsburgh PA USA

In this paper we present a method for incrementally segmenting large RGB-D maps as they are being created. Recent advances in dense RGB-D mapping have led to maps of increasing size and density. Segmentation of these raw maps is a first step for higher-level tasks such as object detection. Current popular methods of segmentation scale linearly with the size of the map and generally include all points. Our method takes a previously segmented map and segments new data added to that map incrementally online. Segments in the existing map are re-segmented with the new data based on an iterative voting method. Our segmentation method works in maps with loops to combine partial segmentations from each traversal into a complete segmentation model. We verify our algorithm on multiple real-world datasets spanning many meters and millions of points in real-time. We compare our method against a popular batch segmentation method for accuracy and timing complexity.

关键词： Silicon Complexity theory Image segmentation Real-time systems Timing Simultaneous localization and mapping

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Scaled Minimum Unscented Multiple Hypotheses Mixing Filter

Scaled Minimum Unscented Multiple Hypotheses Mixing Filter

引用

American Control Conference

作者： Henrique M. Menegaz Pedro Henrique R.Q.A. Santana Jo?o Y. Ishihara Geovany A. Borges Laboratory of Robotics and Automation (LARA) at the Department of Electrical Engineering University of Brasilia Brasilia DF Brasil Computer Science and Artificial Intelligence Lab Massachusetts Institute of Technology Cambridge MA 02139 USA

ISBN: (纸本)9781479901777

This work brings two new contributions. First, it introduces the Scaled Minimum Unscented Multiple Hypotheses Mixing Filter, a novel filter for hybrid dynamical systems that 1) uses a new minimum set of sigma points along with the scaled unscented transform in a hybrid framework;2) can estimate the Markovian Transition Probability Matrix in real-time;3) features a pruning step that reduces the filter's computational effort and prevents its estimates from being degraded by very unlikely hypotheses;and 4) has a mixing step with merging depth greater than one. Second, we present a result revealing the conservativeness of one of the scaled unscented transform forms.

关键词： hybrid dynamical systems sigma points along scaled unscented transform

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An Investigation on the Accuracy of Regional Ocean Models Through Field Trials

An Investigation on the Accuracy of Regional Ocean Models Th...

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IEEE International Conference on robotics and Automation

作者： Ryan N. Smith Kimia Nazarzadeh Jonathan Kelly Gaurav S. Sukhatme School of Electrical Engineering and Computer Science Queensland University of Technology Brisbane QLD 4001 Australia. Robust Robotics Group Computer Science and Artificial Intelligence Laboratory Massachusetts Institute of Technology Cambridge MA 02142 USA. Robotic Embedded Systems Laboratory Department of Computer Science University of Southern California Los Angeles CA 90089 USA.

ISBN: (纸本)9781467356404

Recent efforts in mission planning for underwater vehicles have utilised predictive models to aid in navigation, optimal path planning and drive opportunistic sampling. Although these models provide information at a unprecedented resolutions and have proven to increase accuracy and effectiveness in multiple campaigns, most are deterministic in nature. Thus, predictions cannot be incorporated into probabilistic planning frameworks, nor do they provide any metric on the variance or confidence of the output variables. In this paper, we provide an initial investigation into determining the confidence of ocean model predictions based on the results of multiple field deployments of two autonomous underwater vehicles. For multiple missions of two autonomous gliders conducted over a two-month period in 2011, we compare actual vehicle executions to simulations of the same missions through the Regional Ocean Modeling System in an ocean region off the coast of southern California. This comparison provides a qualitative analysis of the current velocity predictions for areas within the selected deployment region. Ultimately, we present a spatial heat-map of the correlation between the ocean model predictions and the actual mission executions. Knowing where the model provides unreliable predictions can be incorporated into planners to increase the utility and application of the deterministic estimations.

关键词： Regional Ocean Models Through Field Trials mission planning underwater vehicles

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Evaluation of fast 2D and 3D medical image retrieval approaches based on image miniatures

Evaluation of fast 2D and 3D medical image retrieval approac...

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2nd MICCAI International Workshop on Medical Content-Based Retrieval for Clinical Decision Support, MCBR-CDS 2011

作者： Donner, René Haas, Sebastian Burner, Andreas Holzer, Markus Bischof, Horst Langs, Georg Computational Image Analysis and Radiology Lab. Department of Radiology Medical University of Vienna Austria Institute for Computer Graphics and Vision Graz University of Technology Austria Computer Science and Artificial Intelligence Laboratory Massachusetts Institute of Technology Cambridge MA United States

ISBN: (纸本)9783642284595

The present work evaluates four medical image retrieval approaches based on features derived from image miniatures. We argue that due to the restricted domain of medical image data, the standardized acquisition protocols and the absence of a potentially cluttered background a holistic image description is sufficient to capture high-level image similarities. We compare four different miniature 2D and 3D descriptors and corresponding metrics, in terms of their retrieval performance: (A) plain miniatures together with euclidean distances in a k Nearest Neighbor based retrieval backed by kD-trees;(B) correlations of rigidly aligned miniatures, initialized using the kD-tree;(C) distribution fields together with the l1-norm;(D) SIFT-like histogram of gradients using the χ2-distance. We evaluate the approaches on two data sets: the ImageClef 2009 benchmark of 2D radiographs with the aim to categorize the images and a large set of 3D-CTs representing a realistic sample in a hospital PACS with the objective to estimate the location of the query volume. © 2012 Springer-Verlag.

关键词： Medical imaging

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