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Developing a Machine Learning Algorithm to Predict the Probability of Medical Staff Work Mode Using Human-Smartphone Interaction Patterns: Algorithm Development and Validation Study

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Journal of medical Internet research 2023年 25卷 e48834页

作者： Chen, Hung-Hsun Lu, Henry Horng-Shing Weng, Wei-Hung Lin, Yu-Hsuan Department of Mathematics Fu Jen Catholic University New Taipei City Taiwan Program of Artificial Intelligence & Information Security Fu-Jen Catholic University New Taipei City Taiwan Institute of Statistics National Yang Ming Chiao Tung University Hsinchu Taiwan Department of Statistics and Data Science Cornell University Ithaca NY United States Computer Science and Artificial Intelligence Laboratory Massachusetts Institute of Technology Cambridge MN United States Institute of Population Health Sciences National Health Research Institutes Miaoli County Taiwan Department of Psychiatry National Taiwan University Hospital Taipei Taiwan Department of Psychiatry College of Medicine National Taiwan University Taipei Taiwan

BACKGROUND: Traditional methods for investigating work hours rely on an employee's physical presence at the worksite. However, accurately identifying break times at the worksite and distinguishing remote work outside the worksite poses challenges in work hour estimations. Machine learning has the potential to differentiate between human-smartphone interactions at work and off work. OBJECTIVE: In this study, we aimed to develop a novel approach called "probability in work mode," which leverages human-smartphone interaction patterns and corresponding GPS location data to estimate work hours. METHODS: To capture human-smartphone interactions and GPS locations, we used the "Staff Hours" app, developed by our team, to passively and continuously record participants' screen events, including timestamps of notifications, screen on or off occurrences, and app usage patterns. Extreme gradient boosted trees were used to transform these interaction patterns into a probability, while 1-dimensional convolutional neural networks generated successive probabilities based on previous sequence probabilities. The resulting probability in work mode allowed us to discern periods of office work, off-work, breaks at the worksite, and remote work. RESULTS: Our study included 121 participants, contributing to a total of 5503 person-days (person-days represent the cumulative number of days across all participants on which data were collected and analyzed). The developed machine learning model exhibited an average prediction performance, measured by the area under the receiver operating characteristic curve, of 0.915 (SD 0.064). Work hours estimated using the probability in work mode (higher than 0.5) were significantly longer (mean 11.2, SD 2.8 hours per day) than the GPS-defined counterparts (mean 10.2, SD 2.3 hours per day;P<.001). This discrepancy was attributed to the higher remote work time of 111.6 (SD 106.4) minutes compared to the break time of 54.7 (SD 74.5) minutes. CONCLUSIONS: Our

关键词： deep learning digital phenotyping extreme gradient-boosted trees human-smartphone interaction machine learning one-dimensional convolutional neural network probability in work mode work hours

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Empowering Biomedical Discovery with AI Agents

arXiv

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arXiv 2024年

作者： Gao, Shanghua Fang, Ada Huang, Yepeng Giunchiglia, Valentina Noori, Ayush Schwarz, Jonathan Richard Ektefaie, Yasha Kondic, Jovana Zitnik, Marinka Department of Biomedical Informatics Harvard Medical School BostonMA United States Department of Chemistry and Chemical Biology Harvard University CambridgeMA United States Program in Biological and Biomedical Sciences Harvard Medical School BostonMA United States Department of Brain Sciences Imperial College London London United Kingdom Harvard College CambridgeMA United States Program in Biomedical Informatics Harvard Medical School BostonMA United States Department of Electrical Engineering and Computer Science MIT CambridgeMA United States Kempner Institute for the Study of Natural and Artificial Intelligence Harvard University MA United States Broad Institute of MIT and Harvard CambridgeMA United States Harvard Data Science Initiative CambridgeMA United States

We envision "AI scientists" as systems capable of skeptical learning and reasoning that empower biomedical research through collaborative agents that integrate AI models and biomedical tools with experimental platforms. Rather than taking humans out of the discovery process, biomedical AI agents combine human creativity and expertise with AI’s ability to analyze large datasets, navigate hypothesis spaces, and execute repetitive tasks. AI agents are poised to be proficient in various tasks, planning discovery workflows and performing self-assessment to identify and mitigate gaps in their knowledge. These agents use large language models and generative models to feature structured memory for continual learning and use machine learning tools to incorporate scientific knowledge, biological principles, and theories. AI agents can impact areas ranging from virtual cell simulation, programmable control of phenotypes, and the design of cellular circuits to developing new therapies. © 2024, CC BY.

关键词： Adversarial machine learning

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Explainable machine learning models for estimating daily dissolved oxygen concentration of the Tualatin River

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Engineering Applications of Computational Fluid Mechanics 2024年第1期18卷

作者： Li, Shuguang Qasem, Sultan Noman Band, Shahab S. Ameri, Rasoul Pai, Hao-Ting Mehdizadeh, Saeid School of Computer Science and Technology Shandong Technology and Business University Yantai China Computer Science Department College of Computer and Information Sciences Imam Mohammad Ibn Saud Islamic University (IMSIU) Riyadh Saudi Arabia Computer Science Department Faculty of Applied Science Taiz University Taiz Yemen Future Technology Research Center National Yunlin University of Science and Technology Douliu Taiwan Department of Information Management International Graduate School of Artificial Intelligence National Yunlin University of Science and Technology Douliu Taiwan Department of Information Management National Yunlin University of Science and Technology Douliu Taiwan Bachelor Program of Big Data Applications in Business National Pingtung University Pingtung Taiwan Water Engineering Department Urmia University Urmia Iran

Monitoring the quality of river water is of fundamental importance and needs to be taken into consideration when it comes to the research into the hydrological field. In this context, the concentration of the dissolved oxygen (DO) is one of the most significant indicators of the quality of river water. The current study aimed to estimate the minimum, maximum, and mean DO concentrations (DO min, DO max, DO mean) at a gauging station located on Tualatin River, United States. To that end, four machine learning models, such as support vector regression (SVR), multi-layer perceptron (MLP), random forest (RF), and gradient boosting (GB) were established. Root mean square error (RMSE), mean absolute error (MAE), coefficient of correlation (R), and Nash-Sutcliffe efficiency (NSE) metrics were employed to better assess the accuracies of these models. The modeling results demonstrated that the SVR and MLP surpassed the RF and GB models. Despite this, the SVR was concluded to be the best-performing method when used to estimate the DO min, DO max, and DO mean. The best error statistics in the testing phase were related to the SVR model with full (four) inputs to estimate DO mean concentration (RMSE = 0.663 mg/l, MAE = 0.508 mg/l, R = 0.945, NSE = 0.875). Finally, the explainability of the superior models (i.e. SVR models) was conducted using SHapley Additive exPlanations (SHAP) for the first time to estimate DO concentration. In fact, evaluating the explainability of machine learning models can provide useful information about the impact of each of the input estimators used in the procedure of models development. It was concluded that the specific conductance (SC) and followed by water temperature (WT) could provide the most contributions for estimating the DO min, DO max, and DO mean concentrations. © 2024 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

关键词： dissolved oxygen concentration estimation Explainable machine learning SHapley additive explanations

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Spatiotemporal dilated convolution with uncertain matching for video-based crowd estimation

arXiv

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arXiv 2021年

作者： Ma, Yu-Jen Shuai, Hong-Han Cheng, Wen-Huang Department of Electrical and Computer Engineering National Chiao Tung University Hsinchu Taiwan Institute of Electronics National Chiao Tung Univresity Hsinchu300 Taiwan Artificial Intelligence and Data Science Program National Chung Hsing University Taichung400 Taiwan

In this paper, we propose a novel SpatioTemporal convolutional Dense Network (STDNet) to address the video-based crowd counting problem, which contains the decomposition of 3D convolution and the 3D spatiotemporal dilated dense convolution to alleviate the rapid growth of the model size caused by the Conv3D layer. Moreover, since the dilated convolution extracts the multiscale features, we combine the dilated convolution with the channel attention block to enhance the feature representations. Due to the error that occurs from the difficulty of labeling crowds, especially for videos, imprecise or standard-inconsistent labels may lead to poor convergence for the model. To address this issue, we further propose a new patch-wise regression loss (PRL) to improve the original pixel-wise loss. Experimental results on three video-based benchmarks, i.e., the UCSD, Mall and WorldExpo’10 datasets, show that STDNet outperforms both image- and video-based state-of-the-art methods. The source codes are released at https://***/STDNet/STDNet. Copyright © 2021, The Authors. All rights reserved.

关键词： Convolution

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Crack Catcher AI — Enabling Smart Fracture Mechanics Approach for Damage Control in Thin Silicon Wafers for 3D Semiconductor Integrated Devices/Packages

Crack Catcher AI — Enabling Smart Fracture Mechanics Approa...

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Annual International Symposium on Reliability Physics

作者： Gabriel Preston Greer Gonzolez Andrea S. Karnyoto Fitya S. Mozar Matthew M. Henry Mahmud Isnan Kuncahyo S. Nugroho Henry Candra Muhamad Doris Dianing N. N. Putri Tyas K Sari Bens Pardamean Endang Djuana Derrric Speaks Arief S. Budiman Oregon Renewable Energy Center (OREC) Oregon Institute of Technology (Oregon Tech) Klamath Falls OR USA Dept. of Manufacturing & Mechanical Eng. & Tech. (MMET) Oregon Institute of Technology Klamath Falls OR USA Bioinformatics & Data Science Research Center (BDSRC) Bina Nusantara University Jakarta Indonesia Computer Sci. Dept. BINUS Grad. Program - Master of Computer Sci. Bina Nusantara University Jakarta Indonesia Computer Science Department School of Computer Science Bina Nusantara University Jakarta Indonesia Center for Artificial Intelligence and Advanced Technology (CAPTIVATE) Universitas TRISAKTI Jakarta Indonesia Department of Electrical Engineering Faculty of Industrial Technology Universitas TRISAKTI Jakarta Indonesia Industrial Eng. Dept. BINUS Grad. Program – Master of Industrial Eng. Bina Nusantara University Jakarta Indonesia

ISBN: (数字)9798331504779

ISBN: (纸本)9798331504786

The importance of silicon cannot be undermined - in photovoltaics (PV) as well as in semiconductor industries. However, silicon is very brittle. Silicon cells/wafers crack easily during manufacturing assembly and/or during device operations. Crack Catcher AI uses novel smart fracture mechanics approach with artificial intelligence (AI) methodologies to predict and control crack/damage evolution in thin silicon cells/wafers. This is critical as semiconductor 3D integration technology calls for wafer-to-wafer bonding with utmost alignment accuracy and yield/reliability.

关键词： Semiconductor device measurement Three-dimensional displays Accuracy Semiconductor device reliability Silicon artificial intelligence Bonding Stress Three-dimensional integrated circuits Stress measurement

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Template-free try-on image synthesis via semantic-guided optimization

arXiv

引用

arXiv 2021年

作者： Chou, Chien-Lung Chen, Chieh-Yun Hsieh, Chia-Wei Shuai, Hong-Han Liu, Jiaying Cheng, Wen-Huang Department of Electrical and Computer Engineering National Chiao Tung University Taiwan Institute of Electronics National Chiao Tung University Taiwan Artificial Intelligence and Data Science Program National Chung Hsing University Taiwan Wangxuan Institute of Computer Technology Peking University China

The virtual try-on task is so attractive that it has drawn considerable attention in the field of computer vision. However, presenting the three-dimensional (3D) physical characteristic (e.g., pleat and shadow) based on a 2D image is very challenging. Although there have been several previous studies on 2D-based virtual try-on work, most 1) required user-specified target poses that are not user-friendly and may not be the best for the target clothing, and 2) failed to address some problematic cases, including facial details, clothing wrinkles and body occlusions. To address these two challenges, in this paper, we propose an innovative template-free try-on image synthesis (TF-TIS) network. The TF-TIS first synthesizes the target pose according to the user-specified in-shop clothing. Afterward, given an in-shop clothing image, a user image, and a synthesized pose, we propose a novel model for synthesizing a human try-on image with the target clothing in the best fitting pose. The qualitative and quantitative experiments both indicate that the proposed TF-TIS outperforms the state-of-the-art methods, especially for difficult cases. Copyright © 2021, The Authors. All rights reserved.

关键词： Semantics

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Interpretation of NLP models through input marginalization

arXiv

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arXiv 2020年

作者： Kim, Siwon Yi, Jihun Kim, Eunji Yoon, Sungroh Data Science and Artificial Intelligence Laboratory ECE Interdisciplinary Program in AI Institute of Engineering Research Seoul National University Seoul08826 Korea Republic of

To demystify the "black box" property of deep neural networks for natural language processing (NLP), several methods have been proposed to interpret their predictions by measuring the change in prediction probability after erasing each token of an input. Since existing methods replace each token with a predefined value (i.e., zero), the resulting sentence lies out of the training data distribution, yielding misleading interpretations. In this study, we raise the out-of-distribution problem induced by the existing interpretation methods and present a remedy;we propose to marginalize each token out. We interpret various NLP models trained for sentiment analysis and natural language inference using the proposed method. Copyright © 2020, The Authors. All rights reserved.

关键词： Sentiment analysis

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Electronic Near Point of Convergence: A Tool to Aid the Assessment of Concussion

Electronic Near Point of Convergence: A Tool to Aid the Asse...

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IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

作者： Bo Liang Leslie S. Prichep Saloni Kanakia Jeffrey J. Bazarian Tracey Covassin Robert J. Elbin Gillian A. Hotz Jeb F. Struder Rubén Armañanzas R&D Department BrainScope Company Inc. Chevy Chase MD USA Department of Emergency Medicine University of Rochester School of Medicine Rochester NY USA Department of Kinesiology Michigan State University East Lansing MI USA Office Sports Concussion Research University of Arkansas Fayetteville AR USA UHealth Concussion Program University of Miami Miami FL USA Korey Stringer Institute University of Connecticut CT USA Institute of Data Science and Artificial Intelligence TECNUN School of Engineering University of Navarra Pamplona Spain

Near Point of Convergence (NPC) is a widely used test when assessing oculomotor dysfunction in patients with mild Traumatic Brain Injury (mTBI) or concussion. A new electronic version of the Near Point Convergence test (eNPC) was developed to automatically measure NPC distance, addressing the need to improve the administration and precision of NPC testing. Age-adjusted normative values were achieved by using goodness-of-fit and generalized linear regression models. Target subjects included males and females aged 13 to 50 years. Normative values were computed as a function of age for records from 230 healthy volunteers. eNPC values from an independent cohort of 237 patients clinically deemed to have concussion and 245 matched controls were transformed into z-scores relative to age-expected normal eNPC values and then compared to demonstrate performance in a clinical population. Mean differences between matched controls and concussed patients showed a highly significant difference for eNPC z-scores between groups. The maximum Odds-Ratio (OR) value for z-scores was reached in the cutoff interval 0.75 to 1 with a mean of 2.614 and a median of 2.627. Usability for the eNPC test was high with a rate of obtaining measurements between 92% and 98%. Using z-scores helped reduce variance of the measurement and accounted for the effect of age. Significant separation between concussed patients and matched controls validated the use of the eNPC mathematical model. Further, high OR values using z-scores demonstrated potential improved clinical utility of the eNPC in the prediction of oculomotor dysfunction.

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Multimodal AI predicts clinical outcomes of drug combinations from preclinical data

arXiv

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arXiv 2025年

作者： Huang, Yepeng Su, Xiaorui Ullanat, Varun Liang, Ivy Clegg, Lindsay Olabode, Damilola Ho, Nicholas John, Bino Gibbs, Megan Zitnik, Marinka Department of Biomedical Informatics Harvard Medical School BostonMA United States Program in Biological and Biomedical Sciences Harvard Medical School BostonMA United States Harvard College CambridgeMA United States Clinical Pharmacology and Quantitative Pharmacology Clinical Pharmacology & Safety Sciences R&D AstraZeneca GaithersburgMD United States Clinical Pharmacology and Quantitative Pharmacology Clinical Pharmacology & Safety Sciences R&D AstraZeneca WalthamMA United States Program in Computational Biology Carnegie Mellon University PittsburghPA United States Imaging and Data Analytics Clinical Pharmacology & Safety Sciences R&D AstraZeneca WalthamMA United States Kempner Institute for the Study of Natural and Artificial Intelligence Harvard University AllstonMA United States Broad Institute of MIT and Harvard CambridgeMA United States Harvard Data Science Initiative CambridgeMA United States

Predicting clinical outcomes from preclinical data is essential for identifying safe and effective drug combinations, reducing late-stage clinical failures, and accelerating the development of precision therapies. Current models rely on structural or target-based features to identify high-efficacy, low-toxicity drug combinations. However, these approaches fail to incorporate the multimodal data necessary for accurate, clinically-relevant predictions. Here, we introduce MADRIGAL, a multimodal AI model that learns from structural, pathway, cell viability, and transcriptomic data to predict drug combination effects across 953 clinical outcomes and 21,842 compounds, including combinations of approved drugs and novel compounds in development. MADRIGAL uses a transformer bottleneck module to unify preclinical drug data modalities while handling missing data during training and inference—a major challenge in multimodal learning. It outperforms single-modality methods and state-of-the-art models in predicting adverse drug interactions. MADRIGAL performs virtual screening of anticancer drug combinations and supports polypharmacy management for type II diabetes and metabolic dysfunction-associated steatohepatitis (MASH). It identifies transporter-mediated drug interactions. MADRIGAL predicts resmetirom, the first and only FDA-approved drug for MASH, among therapies with the most favorable safety profile. It supports personalized cancer therapy by integrating genomic profiles from cancer patients. Using primary acute myeloid leukemia samples and patient-derived xenograft models, it predicts the efficacy of personalized drug combinations. Integrating MADRIGAL with a large language model allows users to describe clinical outcomes in natural language, improving safety assessment by identifying potential adverse interactions and toxicity risks. MADRIGAL provides a multimodal approach for designing combination therapies with improved predictive accuracy and clinical relevance. Copy

关键词： Diseases

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Estimation of the main air pollutants from different biomasses under combustion atmospheres by artificial neural networks

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Chemosphere 2024年 352卷 141484页

作者： Monteiro, Thalyssa Oliveira Alves, Pedro Augusto Araújo da Silva de Almeida Nava Barradas Filho, Alex Oliveira Villa-Vélez, Harvey Alexander Cruz, Glauber Postgraduate Program in Mechanical Engineering (PPGMEC) Department of Mechanics and Materials Federal Institute of Education Science and Technology of Maranhão (IFMA) Maranhão São Luís Brazil Postgraduate Program in Computer Science and Computational Mathematics (PPG-CCMC) Department of Computer Science University of São Paulo (USP) São Carlos São Paulo Brazil Data Analysis and Artificial Intelligence Laboratory (DARTi) Department of Computational Engineering Federal University of Maranhão (UFMA) Maranhão São Luís Brazil Department of Chemical Engineering Federal University of Maranhão (UFMA) Maranhão São Luís Brazil Processes and Thermal Systems Laboratory (LPSisTer) Department of Mechanical Engineering Federal University of Maranhão (UFMA) Maranhão São Luís Brazil

The production of biofuels to be used as bioenergy under combustion processes generates some gaseous emissions (CO, CO2, NOx, SOx, and other pollutants), affecting living organisms and requiring careful assessments. H... 详细信息

The production of biofuels to be used as bioenergy under combustion processes generates some gaseous emissions (CO, CO₂, NO_x, SO_x, and other pollutants), affecting living organisms and requiring careful assessments. However, obtaining such information experimentally for data evaluation is costly and time-consuming and its in situ obtaining for regional biomasses (e.g., those from Northeast Brazil (NEB) is still a major challenge. This paper reports on the application of artificial neural networks (ANNs) for the prediction of the main air pollutants (CO, CO₂, NO, and SO₂) produced during the direct biomass combustion (N₂/O₂:80/20%) with the use of ultimate analysis (carbon, hydrogen, nitrogen, sulfur, and oxygen). 116 worldwide biomasses were used as input data, which is a relevant alternative to overcome the lack of experimental resources in NEB and obtain such information. Cross-validation was conducted with k-fold to optimize the ANNs and performance was analyzed with the use of statistical errors for accuracy assessments. The results showed an acceptable statistical performance for all architectures of ANNs, with 0.001–12.41% MAPE, 0.001–5.82 mg Nm⁻³ MAE, and 0.03–52.30 mg Nm⁻³ RMSE, highlighting the high precision of the emissions studied. On average, the differences between predicted and real values for CO, CO₂, NO, and SO₂ emissions from NEB biomasses were approximately 0.01%, 10⁻⁶%, 0.14%, and 0.05%, respectively. Pearson coefficient provided consistent results of concentration of the ultimate analysis in relation to the emissions studied and effectiveness of the test set in the developed models. © 2024 Elsevier Ltd

关键词： Brazilian northeastern Environmental statistics Evaluation metrics Gaseous emissions Predictive models Thermoconversion

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