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Systematic Literature Review on Metaheuristic Algorithms in SNP Analysis for Diseases 6

Systematic Literature Review on Metaheuristic Algorithms in ...

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6th International Conference on Cybernetics and Intelligent System, ICORIS 2024

作者： Sulistyawan, Jason Sebastian Nugroho, Kuncahyo Setyo Pardamean, Bens Computer Science Department BINUS Graduate Program Bina Nusantara University Jakarta11480 Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia

ISBN: (纸本)9798331539603

Single-nucleotide polymorphism (SNP) analysis has become a pivotal strategy for drug discovery within bioinformatics, especially for incurable diseases like cancer. With the increasing number of researchers starting to embrace metaheuristic methods, a review was done by gathering papers from the Google Scholar database from 2018 to 2023, which resulted in 20 papers after title, abstract, and content filtering. The findings show that the Genetic Algorithm and the Harmony Search Algorithm have become popular approaches in SNP analysis, particularly in studies on breast cancer, age-related macular degeneration, and colorectal cancer. However, the review shows that while researchers have proven most methods effective in finding disease-related SNPs, a more measurable study in SNP analysis is needed, due to the lack of elaboration on measurement metrics in the found studies. © 2024 IEEE.

关键词： metaheuristic algorithms single nucleotide polymorphisms

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Systematic Literature Review on IT Strategic Workspaces: Approach to Develop an Ideal Environment 9

Systematic Literature Review on IT Strategic Workspaces: App...

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9th IEEE International Conference on Computing, Engineering and Design, ICCED 2023

作者： Putra, Alden Ardiwinata Fusanto, Princessa Fortunata Valonika, Nebrisca Anggreainy, Maria Susan Kurniawan, Afdhal Bina Nusantara University School of Computer Science Computer Science Department Jakarta11480 Indonesia BINUS Graduate Program Doctor of Computer Science Computer Science Department Bina Nusantara University Jakarta11530 Indonesia

ISBN: (纸本)9798350370126

Technology and information will always develop dynamically;this statement demands programmers to always be creative and keep up with the times. Despite this, their work ethic is always the same and tends to stagnate. programmers' perspectives on their workplace: this perspective is rarely seen as important and the opportunity for a comprehensive study is still widely open. This study aims to conduct a systematic literacy study to ascertain that the workplace has a crucial relationship with a programmer's performance. The focus of the study includes a discussion of how programmers relate to their workplace in a tech company, benchmarking between various office layouts, and criteria that can be derived from the literature review regarding a degree of whether such a workplace is good or bad. The proper base facts are obtained. Nevertheless, the two entities are proven to be interrelated to each other. Such correlations are derived into tangible metrics and parameters (e.g., human cognitive, cultural, physical, behavioral, etc.). Relating issues regarding these topics are also presented. © 2023 IEEE.

关键词： Software engineering

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Authorship Attribution in Bahasa Indonesia Using Twitter Dataset on Political Topic 4

Authorship Attribution in Bahasa Indonesia Using Twitter Dat...

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4th International Conference on Artificial Intelligence and Data sciences, AiDAS 2023

作者： Muliono, Yohan Gaol, Ford Lumban Chowanda, Andry Budiharto, Widodo Bina Nusantara University Binus Graduate Program-Doctor of Computer Science Computer Science Department Jakarta11480 Indonesia School of Computer Science Bina Nusantara University Computer Science Department Jakarta11480 Indonesia

ISBN: (纸本)9798350318432

Fake news so called made-up news intended to cause misinformation is identified as Hoax. In Indonesia, hoaxes could not be ignored, fairly low literacy rate is the cause of hoaxes could spread quickly in Indonesia, to make it even worse, there are so many people would believe in hoaxes without any intention to make sure of the integrity of the news. even the media in Indonesia are competing with one another to provide content with provocative names in the hopes of increasing their rating and reaching as many people as possible. In the course of this research, a method for identifying authors on the basis of their writings will be developed to reduce the spread of hoaxes and encourage people to re-evaluate their decision to create harmful content and hoax news in the future. In this investigation, a transformer-based methodology focusing on IndoBERTbase, IndoBERTbase-uncased, and IndoBERTtweet will be employed in conjunction with the self-collected Indonesian tweet data that will be crawled from Indonesian Social Actor Focused on politicians in Twitter and will be combined with another topic in the future study. This research has shown a promising 98,93% in Training Accuracy using IndoBERTtweet. © 2023 IEEE.

关键词： Curricula

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Evaluating the Effectiveness of Transformer Models for Molecular Property Prediction: A Review 9

Evaluating the Effectiveness of Transformer Models for Molec...

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9th International Conference on Information Technology and Digital Applications, ICITDA 2024

作者： Imani, Alyssa Pardamean, Bens Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia Binus Graduate Program Bina Nusantara University Computer Science Departement Jakarta11480 Indonesia

ISBN: (纸本)9798331510732

Transformer models, originally successful in natural language processing, are now being applied to chemical and biological studies, excelling in areas such as molecular property prediction, material science, and drug discovery. BERT, a Transformer-based model, has become foundational in cheminformatics, particularly for QSAR (Quantitative Structure-Activity Relationship) modeling and ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) evaluations in drug discovery. However, achieving higher accuracy often requires designing more complex models, which can compromise their interpretability. This posing a challenge for researchers who need to understand the reasoning behind the predictions. The trade-off between accuracy and interpretability presents a critical challenge in applying black box models to real-world problems in cheminformatics. This work compares Transformer-based models with traditional machine learning and deep learning approaches, focusing on both interpretability and performance. The goal is to highlight the strengths and limitations of each method, offering insights into their optimal use in drug discovery and material science. © 2024 IEEE.

关键词： Prediction models

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Air Pollution Level Prediction in Jakarta Using Artificial Neural Network 4

Air Pollution Level Prediction in Jakarta Using Artificial N...

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4th International Conference on Artificial Intelligence and Data sciences, AiDAS 2023

作者： Ferdinan, Roger Margareta, Krestella Christyan, Stevan Anggreainy, Maria Susan Kurniawan, Afdhal School of Computer Science Bina Nusantara University Computer Science Department Jakarta11480 Indonesia Bina Nusantara University Binus Graduate Program Doctor of Computer Science Computer Science Department Jakarta11530 Indonesia

ISBN: (纸本)9798350318432

Air pollution has emerged as a critical issue in several major urban areas, including Jakarta. To address this problem, the study explores the utilization of the Artificial Neural Network (ANN) method. Three distinct approaches are investigated in this research: the Support Vector Classifier (SVC), Deep Artificial Neural Network (Deep ANN), and Long Short-Term Memory (LSTM). The available Air Quality data were utilized to train and assess the performance of the proposed ANN models. The research findings reveal that the Deep ANN model surpasses the other methods, achieving an impressive accuracy of approximately 96.57% and a cross-entropy value of 0.1103. In predicting air quality in Jakarta, Deep ANN has demonstrated superior performance when compared to SVC and LSTM. These results highlight the significant potential of deploying Deep Artificial Neural Network (ANN) methodologies for air quality prediction. Such an approach could play a pivotal role in the development of monitoring and early warning systems aimed at effectively addressing air quality issues in the Jakarta region. © 2023 IEEE.

关键词： Long short-term memory

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AI Chatbot Technology to Predict Disease: A Systematic Literature Review 4

AI Chatbot Technology to Predict Disease: A Systematic Liter...

引用

4th International Conference on Artificial Intelligence and Data sciences, AiDAS 2023

作者： Velasco, Vincent Dedy Setiawan, Kevin Robert Sanjaya, Renaldo Susan Anggreainy, Maria Kurniawan, Afdhal School of Computer Science Bina Nusantara University Computer Science Department Jakarta11480 Indonesia Bina Nusantara University Binus Graduate Program Doctor of Computer Science Computer Science Department Jakarta11530 Indonesia

ISBN: (纸本)9798350318432

Artificial Intelligence (AI) and chatbot technology have emerged as promising solutions to improve healthcare services. AI chatbots can mimic human-like interactions and assist with tasks such as triaging patients and providing medical advice. This review focuses on the use of AI chatbots in predicting diseases, aiming to explore their effectiveness and potential for early intervention and treatment. The purpose of this systematic literature review is to analyze studies related to AI chatbot technology in disease prediction. A systematic literature review was conducted, analyzing a total of 24 selected journals based on predefined inclusion and exclusion criteria. The review protocol involved examining studies published from various years, with a particular emphasis on articles from 2020. The findings indicate that AI chatbots have the potential to play a significant role in predicting diseases and assisting healthcare professionals in making informed decisions. AI chatbot technology shows tremendous potential in disease prediction. By utilizing machine learning algorithms and techniques, chatbots can enhance the accuracy and quickness of disease diagnosis. Continued research and development efforts are necessary to refine AI chatbots' capabilities and revolutionize healthcare delivery for improved patient outcomes and disease management. © 2023 IEEE.

关键词： Diagnosis

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Stemming Algorithm for the Indonesian Language: A Scientometric View

Stemming Algorithm for the Indonesian Language: A Scientomet...

引用

2022 IEEE Creative Communication and Innovative Technology, ICCIT 2022

作者： Maesya, Aries Ramadhan, Arief Abdurachman, Edi Trisetyarso, Agung Zarlis, Muhammad Bina Nusantara University Binus Graduate Program - Computer Science Computer Science Department Jakarta11480 Indonesia

ISBN: (纸本)9781665468763

Stemming is the process of cutting affixes, both prefixes and suffixes from a term to get the root of the word that has affixes. Stemming can be done in any language, especially in Indonesia Language. Indonesian which is rooted in Malay and Sanskrit has a bigger influence on Language. The algorithm of stemming that has developed is the one that is based on the dictionary of a root word. This kind of algorithm was started by Nazief- Adriani and it grew up to be Confix Stripping (CS), and then was perfected to be Enhanced Confix Stripping (ECS). A scientometric analysis is a mathematical method used to identify academic publications related to citations and scientific matters and is intended for use in libraries or other fields. In this research, the publication of which using stemming algorithm selected and collected using keywords related to Nazief Adriani and ECS. The publications are collected from *** (an online database for advance scientific research). From those publication we did the analysis bibliometric help by the VOS Viewer application using the analysis technique of co-authorship and citation technique, and all done. The result are, from 310 publications that have keywords Nazief Adriani and 119 publications containing the keyword ECS, it was found that the owning documents will be the reference sources of the next research in which the most citation and co-authorship are found in Indonesia. © 2022 IEEE.

关键词： Publishing

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Prototype UX Design: Mobile Augmented Reality Application based on Gamification for Cultural Heritage Tourism 8

Prototype UX Design: Mobile Augmented Reality Application ba...

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8th International HCI and UX Conference in Indonesia, CHIuXiD 2022

作者： Hiererra, Siti Elda Meyliana Ramadhan, Arief Purnomo, Fredy Bina Nusantara University BINUS Graduate Program-Computer Science Computer Science Department Jakarta11480 Indonesia

ISBN: (纸本)9781665476645

This study aims to identify the processes of UX designing a mobile application, Augmented Reality based on Gamification for Cultural Heritage Tourism, and to provide the prototype design and the testing result;this research employs the Design Thinking Method to design the prototype and uses the System Usability Scale (SUS) to identify and validate the testing result;the author establishes two research questions for this study, then explains the answers through a clear description of the stages of making a prototype which consists of the empathize, define, ideate, prototype, and testing stages, then to find out the testing results, the author uses the SUS method, scoring 88.5 in the excellent and acceptable categories;the originality of the research, this study provides the Design Thinking method to investigate the process of UX designing and the SUS Score method to calculate the resting result, helps build a complete understanding of developing the prototype and validation through testing comprehensively. © 2022 IEEE.

关键词： Augmented reality

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Comparing the Effect of Attention Mechanism and Aspect Embedding on the Performance of Long Short-term Memory Model for Aspect-Based Sentiment Analysis

Comparing the Effect of Attention Mechanism and Aspect Embed...

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2023 International Conference on computer science, Information Technology and Engineering, ICCoSITE 2023

作者： Heryadi, Yaya Wijanarko, Bambang Dwi Murad, Dina Fitria Tho, Cuk Hashimoto, Kiyota BINUS Graduate Program-Doctor of Computer Science Computer Science Department Jakarta11480 Indonesia BINUS Online Learning Computer Science Department Jakarta11480 Indonesia BINUS Online Learning Information Systems Department Jakarta11480 Indonesia Prince of Songkla University Interdisciplinary Graduate School or Earth System Science and Andaman Natural Disaster Management Phuket83120 Thailand

ISBN: (纸本)9798350320954

The attention mechanism is one of the key enablers which have positioned transformer models as the state-of-the-art models in Natural Language Processing. By having the attention mechanism, the first version (vanilla) transformer model can retrieve the hidden state but at the same time can maintain a low requirement on the context vector dimension by selectively choosing to which encoder hidden states to give priority attention. The objective of this study is to evaluate the effect of modified Long Short-term Memory models architecture on the model performance as a predictive model. The first model is modified by adding an attention mechanism to its architecture;whilst, the second model is modified by adding additional input to its architecture. The performance of both models is compared by assigning each model the same task: to address the aspect-based sentiment analysis task. The experiment results show that adding an attention mechanism is not significantly increase the performance of the Long Short-term Memory model in comparison to adding input to the same model. In particular, the average training accuracy of the former model is 0.885;whilst, the average training accuracy of the latter model is 0.942. © 2023 IEEE.

关键词： Sentiment analysis

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LDA Topic Modeling for Bioinformatics Terms in arXiv Documents 9th

LDA Topic Modeling for Bioinformatics Terms in arXiv Documen...

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9th International Conference on computer science and Computational Intelligence, ICCSCI 2024

作者： Karnyoto, Andrea Stevens Henry, Matthew Martianus Pardamean, Bens Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program Bina Nusantara University Jakarta11480 Indonesia

A wide variety of disciplines contribute to bioinformatics research, including computer science, biology, chemistry, mathematics, and physics. This study determines the number of research articles published on arXiv classified as bioinformatics topics and the most frequently used bioinformatics terms using topic modeling, Latent Dirichlet Allocation (LDA). An algorithm based on LDA is used to discover topics hidden within large collections of documents through the use of statistical analysis. Our research examined 226453 articles on arXiv between January 2023 and January 2024. As a result, there are more than 10521 articles categorized into bioinformatics topics. Most commonly, 6352 documents are in the "Mathematical Physics" category. The second most popular category is "computer science," with 2950 documents. Accordingly, the terms 'RNA,' 'sequence,' 'tree,' and 'homology' are the three most commonly used terms in bioinformatics. The study of RNA plays a vital role in molecular biology;thus, the study of RNA is prevalent in bioinformatics. Sequential data refer to the order in which nucleotides or amino acids can be found in a DNA molecule or a protein. © 2024 The Authors.

关键词： arXiv bioinformatics Latent Dirichlet Allocation

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