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Systematic Literature Review on Statistics and Machine Learning Predictive Models for Rice Phenotypes

Procedia computer science 2023年 227卷 1054-1061页

作者： Nicholas Dominic Tjeng Wawan Cenggoro Bens Pardamean Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta 11480 Indonesia Computer Science Department School of Computer Science Bina Nusantara University Jakarta 11480 Indonesia Computer Science Department BINUS Graduate Program – Master of Computer Science Bina Nusantara University Jakarta 11480 Indonesia

Predicting the best-quality of rice phenotypes is the priority among agricultural researchers to fulfill worldwide food security. Trend development of predictive models from statistics to machine learning is the subject of this review. Gathered from the Google Scholar database, 14 appropriate papers (2016-2020) related to the rice phenotypes prediction were selected through title and abstract content filtering. The outputs show that Support Vector Machine, Multi-layer Perceptron, and regression are the most used models, while yield is the priority prediction point besides tiller, panicle, and 1000-grain weight of rice. However, finding the accurate predictor is invariably challenging due to distinct rice varieties in the world and high confounding factors. Thus, developing an advanced deep learning model that accommodates these needs is worth considering further.

关键词： rice phenotypes prediction statistics machine learning

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IoT for Water Quality Categorization 5

IoT for Water Quality Categorization

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5th International Conference on Cybernetics and Intelligent Systems, ICORIS 2023

作者： Sastrohartono, Hermantoro Krisdiarto, Andreas Wahyu Uktoro, Arief Ika Rahutomo, Reza Suparyanto, Teddy Pardamean, Bens Institute of Agriculture Stiper Faculty of Agricultural Technology Agricultural Engineering Department Yogyakarta Indonesia Bina Nusantara University School of Information Systems Information System Department Jakarta11480 Indonesia Bina Nusantara University Bioinformatics & Data Science Research Center Jakarta11480 Indonesia Bina Nusantara University Binus Graduate Program Master of Computer Science Computer Science Department Jakarta11480 Indonesia

ISBN: (纸本)9798350369489

In agricultural water research, the adoption of Internet of Things (IoT) technology has emerged as a pivotal approach for large-scale data collection. Water availability in the context of water quality is very important, both for domestic and industrial purposes. For domestic purposes, drinking water and bathing water are separated. Meanwhile, for the palm oil industry, boiler filler is differentiated from additional process water (dilution water). Water quality parameters can be assessed from turbidity and Total Dissolve Solid (TDS). Measurements using measuring instruments separately and repeatedly require significant energy, time, and costs. This research was conducted with the primary objective of presenting a novel method for categorizing water quality with the approach of IoT sensor technology. The research methodology entailed the utilization of an integrated IoT water sensors system in conjunction with manual water categorization. The methods consist of (1) system design, (2) design and installation of sensor and IoT-based microcontrollers, and (3) accuracy and precision testing compared with laboratory measurements. The precision of the integrated IoT water sensors was assessed through a dedicated sensor precision test, resulting in an accuracy rate of 94.4% for the turbidity sensor and 97.5% for the TDS sensor. Notably, this approach successfully discriminated drinking water with valid categorization, while other water types, including groundwater, water with tea, and water with coffee, yielded null categorization results. © 2023 IEEE.

关键词： Internet of things

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Automatic Multiple Choice Question Generation: A Systematic Literature Review

Automatic Multiple Choice Question Generation: A Systematic ...

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Information Technology and Digital Applications (ICITDA), IEEE International Conference on

作者： Matthew Martianus Henry Nur Adhianti Heryanto Mahmud Isnan Kuncahyo Setyo Nugroho Bens Pardamean Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia Computer Science Department School of Computer Science Bina Nusantara University Jakarta Indonesia Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia

ISBN: (数字)9798331510732

ISBN: (纸本)9798331510749

Despite their drawbacks, multiple-choice questions (MCQ) have been widely used to assess the students' understanding of lectures through examinations. The development of automatic MCQ generation is beneficial, especially for educators. As a starting point for further development, a Systematic Literature Review (SLR) is conducted to uncover current trends, future challenges, and opportunities in automatic MCQ generation. Previously, an SLR was conducted, but it lacks coverage of the utilization of transformer-based models. This SLR covers the development of automatic MCQ generation using either traditional or advanced approaches such as Transformers. The Preferred Reporting Items for Systematic Reviews and Meta-Analyses framework was used to gather the data from Scopus, IEEE Xplore, SpringerLink, arXiv, and Semantic Scholar. The included articles must be open-access computer science conference papers or journal articles and written in English less than five years ago. Four independent reviewers analyzed the research workflow, evaluation metric, and dataset used in each study. There are 18 included studies, where 17% (n = 3) studies are from 2024, 33% (n = 6) studies are from 2023, 22% (n = 4) studies are from 2022, 11% (n = 2) studies are from 2021, and 17% (n = 3) studies are from 2020. There are 33% (n = 6) of the studies used the traditional feature-based engineering approach, 39% (n = 7) of the studies used the Transformer-based model fine-tuning approach, and the remaining used novel approaches. The study found that BERT variants are the most utilized Transformer-based model in automatic MCQ. The research notes some challenges, but also open various opportunities for further research, including Large Language Model (LLM) utilization for automatic MCQ generation, the utilization BERT-based models for standardized machine-learned evaluation metrics, and the initiative for the creation of an MCQ dataset benchmark.

关键词： Measurement Semantics Reinforcement learning Benchmark testing Ontologies Transformers Question generation Prompt engineering Standards Systematic literature review

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Investigating the Impact of Data Augmentation for Fine-Grained Grocery Product Classification Based on Vision Transformer

Investigating the Impact of Data Augmentation for Fine-Grain...

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2023 International Conference on Artificial Intelligence Robotics, Signal and Image Processing, AIRoSIP 2023

作者： Rahmania, Rissa Heryadi, Yaya Lukas, Lukas Suparta, Wayan Sonata, Ilvico Bina Nusantara University Binus Graduate Program Computer Science Computer Science Department Jakarta11480 Indonesia Faculty of Engineering Jakarta12930 Indonesia Institut Teknologi Nasional Yogyakarta Faculty of Industrial Technology Department of Electrical Engineering Yogyakarta55281 Indonesia

ISBN: (纸本)9798350327472

The existence of fine-grained image classification supporting smart retail provides effectiveness in recognizing products with high similarity. However, the generic classification method performs poorly in identifying products from a subordinate category. This paper aims to identify augmentation techniques to leverage the Vision Transformer (ViT) model to classify the fine-grained grocery product, which involves embedding patches and transformer encoders to extract the main features. First, we develop a fine-grained image dataset with ColorJitter, CutOut, and combining both augmentations. Secondly, we perform experiments and analysis of ViT size, embedded patch size and image size in the patch embedding process. Lastly, the ViT model are evaluated according to the image sizes 224, 384, and 512 in accuracy, loss, and confusion matrix. The highest accuracy was obtained at 0.9922. The ColorJitter and CutOut improved the confusion matrix in ViT-B/16 and ViT-L/16 with an image size of 384 and 512. The results show that both augmentations in the ViT model are able to distinguish fine-grained grocery products. © 2023 IEEE.

关键词： Embeddings

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Repurposing transfer learning strategy of computer vision for owl sound classification

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Procedia computer science 2023年 216卷 424-430页

作者： Kevin William Gunawan Alam Ahmad Hidayat Tjeng Wawan Cenggoro Bens Pardamean Computer Science Department BINUS Graduate Program – Master of Computer Science Bina Nusantara University Jakarta 11480 Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta 11480 Indonesia Computer Science Department School of Computer Science Bina Nusantara University Jakarta 11480 Indonesia

Accurately predicting an owl species based on its sound can be helpful for owl conservation. To build an accurate model for owl sound classification, deep learning is currently the most preferred algorithm, due to its excellent performance for modeling audio data. However, deep learning is generally underperformed for a small dataset, which is the case for recognizing scops owl sound. To overcome the issue, we proposed a transfer learning strategy, which is common for computer vision tasks, that can alleviate overfitting in a deep learning model for the owl sound classification. In our approach, we propose a neural network architecture consisting of the backbone of a EfficientNet model pre-trained on the massive ImageNet database. The model takes the sound input that has been converted as two image representations: Spectrogram and Mel Frequency Cepstral Coefficients. Our strategy enables the use of a relatively small size of pre-trained image classification model, which is widely available, for transfer learning in owl sound classification. Deploying the lightweight model in an automatic sound classifier provides a fast and accurate tool for various owl conservation purposes.

关键词： acoustics deep learning bird sound species detection transfer learning

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Machine Learning Approach for Single Nucleotide Polymorphism Selection in Genetic Testing Results 8

Machine Learning Approach for Single Nucleotide Polymorphism...

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8th International Conference on computer science and Computational Intelligence, ICCSCI 2023

作者： Trinugroho, Joko Pebrianto Hidayat, Alam Ahmad Isnan, Mahmud Pardamean, Bens Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia Department of Mathematics School of Computer Science Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program Bina Nusantara University Jakarta11480 Indonesia

Lactose intolerance is a type of digestive problem that may threaten the population because milk and dairy products compose of nutrients that are essential for human body. Genetic tests possess a great potential to detect lactose intolerance as it can be used in children and even infants. However, a new approach to analyze the genetic test results is needed to elucidate the Single Nucleotide Polymorphisms (SNPs) that are related to lactose intolerance. In this work, we utilized the machine learning based feature selection to select the SNPs associated with lactose tolerance trait from genotyping samples of direct-to-customer (DTCG genetic tests, obtained from the public database. Recursive Feature Elimination (RFE) with XGBoost model was used to perform feature selection. We also compared three different models, such as XGBoost, support vector machine (SVM), and random forest (RF) for training the selected features. Our findings revealed that 20 SNPs (out of 3501) were chosen, with rs4394668 as the most important variables (F-score 0.009). Furthermore, when compared to the RF and SVM models, the XGBoost model had the highest accuracy (0.87). Further studies should be undertaken to elucidate how the selected SNPs may lead to the lactose intolerance trait. © 2023 The Authors. Published by Elsevier B.V.

关键词： feature selection genetic test lactose intolerance SNP

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Location Prediction Using Named Entity Recognition for Indonesia Natural Disasters in Data Twitter

SSRN

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SSRN 2022年

作者： Girsang, Abba Suganda Noveta, Bima Krisna Computer Science Department BINUS Graduate Program – Master of Computer Science Bina Nusantara University Jakarta11480 Indonesia

Indonesia is in an area prone to natural disasters, there were 4,650 natural disasters that occurred in 2020. However, the community does not have spatial data regarding the location of the disasters that occurred. The purpose of this study is to provide the location of natural disasters that are poured into maps to the public by utilizing Twitter data which has a fast distribution with the fifth most users in the world. This study proposes a system for geolocation of types of natural disasters obtained from Twitter, which are classified into eight classes of natural disasters using the Support Vector Machine (SVM) method. Then the Twitter text is extracted to find the location in the Twitter text using Named Entity Recognition (NER). NER uses six special classes based on the regional level in Indonesia with an accuracy rate of 85.65%. The result of geolocation using ArcGIS maps is 87,5%. It is hoped that with this research, people will get spatial data to see the points of natural disasters that occur using maps. So, the public can anticipate future disasters, and the authorities can send aid to the location. © 2022, The Authors. All rights reserved.

关键词： Location

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Automatic Smart Crawling on Twitter for Weather Information in Indonesia 8

Automatic Smart Crawling on Twitter for Weather Information ...

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8th International Conference on computer science and Computational Intelligence, ICCSCI 2023

作者： Purwandari, Kartika Perdana, Reza Bayu Sigalingging, Join W.C. Rahutomo, Reza Pardamean, Bens Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia Database Center Division of BMKG Meteorological Climatological and Geophysical Agency Jakarta10720 Indonesia Information Systems Department School of Information Systems Bina Nusantara University Jakarta11480 Indonesia Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta11480 Indonesia

Although Twitter is a popular platform for social interaction analysis and text data mining, it faces challenges with geolocation automation. To address this problem, the researchers propose the utilization of a Support Vector Machine (SVM) model to develop an automated Twitter crawling system. The system aims to collect data related to weather in Indonesia by employing Twin, a Python-based Twitter scraping software. To overcome null geolocations, the study incorporates aliases created based on the common practice of Indonesian users mentioning the country's location in tweets. The results demonstrate that the SVM model, combined with automated smart crawling, achieves an 85% accuracy rate. © 2023 The Authors. Published by Elsevier B.V.

关键词： smart crawling Social media SVM Twitter weather

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The Impact of Information System and Technology of Courier Service During Pandemic 7th

The Impact of Information System and Technology of Courier S...

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7th International Conference on Inventive Communication and Computaional Technologies, ICICCT 2023

作者： Siahaan, Andre Timiko Pinajung, Bagas Rizkyka Kennidy Gaol, Ford Lumban Matsuo, Tokuro School of Information System Bina Nusantara University Alam Sutra Tangerang13960 Indonesia Computer Science Department BINUS Graduate Program—Doctor of Computer Science Bina Nusantara University Jakarta11480 Indonesia Advanced Institute of Industrial Technology Tokyo Japan

ISBN: (纸本)9789819951659

Courier services are a means of transport that can be used to deliver orders to customers or claim orders from them, and customers can use technology from the courier service like track order to track their order. The use of courier service nowadays is common that every day, people use courier service as their daily means of transport for delivering goods. However, in situations like pandemic, the courier services need to put more effort into their services, so that customers can use courier services with trust. The courier service must be more careful to deliver customer orders or send orders to customers. For this research methodology, the data collection technique using Google Forms and collecting data directly from people about their opinion toward the research have been employed. The result of the data collecting technique is depicted as the usage of the courier service during COVID-19 pandemic starting from March 2020. The results vary every month because not everyone uses the courier service every day. Moreover, the conclusion on why the months starting from March to June do not show high usage of courier service is that the pandemic has not been that worse than the later months, and so, people were going out to deliver or to do activities like shopping or buying groceries on their own. © 2023, The Author(s), under exclusive license to Springer Nature Singapore Pte Ltd.

关键词： Information systems

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The Role of Industry 4.0 Technology in Enhancing Small Medium-Sized Enterprises Stability and Growth

The Role of Industry 4.0 Technology in Enhancing Small Mediu...

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Advanced Applied Informatics Winter (IIAI-AAI-Winter), International Congress on

作者： Yuthsi Aprilinda Harco Leslie Hendric Spits Warnars Meyliana Meyliana Harjanto Prabowo Achmad Nizar Hidayanto Computer Science Departement Binus Graduate Program - Doctor of Computer Science Bina Nusantara University Jakarta Indonesia

The purpose of this study is to find out and analyze what has been done by previous studies in knowing the problems faced by SMEs today and how the influence of Industry 4.0 technology in dealing with problems in Small and Medium Enterprises (SMEs), so that they become developed and can maintain their business continuity. Most studies show that SMEs have considerable barriers when trying to use the potential of Industry 4.0 to improve the competitiveness and long-term sustain ability of their business. This systematic literature review uses the Kitchenham technique to identify SME problems and the role of Industry 4.0 technologies in SMEs in various industrialized and developing countries. Through several databases including: IEEE, science Direct, Web of science, Taylor & Francis, Emerald and Springer between 2019 - 2023 were used to find relevant research articles in this study. The research findings offer valuable perspectives on the strategies, obstacles and prospects that SMEs in different countries face in adjusting to Industry 4.0. The contribution of academics in this research is to provide solutions by designing more robust approaches to promote the business sustainability of SMEs and their role in driving economic progress in their countries.

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