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Deep Imputation Bi-stochastic Graph Regularized Matrix Factorization for Clustering Single-cell RNA-sequencing Data

IEEE/ACM Transactions on Computational Biology and Bioinformatics 2024年 PP卷 1-11页

作者： Lan, Wei Chen, Jianwei Liu, Mingyang Chen, Qingfeng Liu, Jin Wang, Jianxin Chen, Yi-Ping Phoebe Wei Lan is School of Computer Electronic and Information and Guangxi Key Laboratory of Multimedia Communications and Network Technology Guangxi University Nanning Guangxi China School of Computer Electronic and Information Guangxi University Nanning Guangxi China School of Computer Electronic and Information and State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources Guangxi University Nanning Guangxi China Hunan Provincial Key Lab on Bioinformatics School of Computer Science and Engineering Central South University Changsha Hunan China Department of Computer Science and Information Technology La Trobe University Melbourne Victoria Australia

By generating massive gene transcriptome data and analyzing transcriptomic variations at the cell level, single-cell RNA-sequencing (scRNA-seq) technology has provided new way to explore cellular heterogeneity and functionality. Clustering scRNA-seq data could discover the hidden diversity and complexity of cell populations, which can aid to the identification of the disease mechanisms and biomarkers. In this paper, a novel method (DSINMF) is presented for single cell RNA sequencing data by using deep matrix factorization. Our proposed method comprises four steps: first, the feature selection is utilized to remove irrelevant features. Then, the dropout imputation is used to handle missing value problem. Further, the dimension reduction is employed to preserve data characteristics and reduce noise effects. Finally, the deep matrix factorization with bi-stochastic graph regularization is used to obtain cluster results from scRNA-seq data. We compare DSINMF with other state-of-the-art algorithms on nine datasets and the results show our method outperformances than other methods. IEEE

关键词： RNA

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A Case Study on Context Encoding in Multi-Encoder based Document-Level Neural Machine Translation 19

A Case Study on Context Encoding in Multi-Encoder based Docu...

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19th Machine Translation Summit, MT Summit 2023

作者： Appicharla, Ramakrishna Gain, Baban Pal, Santanu Ekbal, Asif Department of Computer Science and Engineering Indian Institute of Technology Patna Patna India Wipro AI Lab45 London United Kingdom

Recent studies have shown that the multi-encoder models are agnostic to the choice of context, and the context encoder generates noise which helps improve the models in terms of BLEU score. In this paper, we further explore this idea by evaluating with context-aware pronoun translation test set by training multi-encoder models trained on three different context settings viz, previous two sentences, random two sentences, and a mix of both as context. Specifically, we evaluate the models on the ContraPro test set to study how different contexts affect pronoun translation accuracy. The results show that the model can perform well on the ContraPro test set even when the context is random. We also analyze the source representations to study whether the context encoder generates noise. Our analysis shows that the context encoder provides sufficient information to learn discourse-level information. Additionally, we observe that mixing the selected context (the previous two sentences in this case) and the random context is generally better than the other settings. © 2023 The authors. This article is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0)

关键词： Signal encoding

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Exploring Time-Frequency Domain Target Speaker Extraction For Causal and Non-Causal Processing

Exploring Time-Frequency Domain Target Speaker Extraction Fo...

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2023 IEEE Automatic Speech Recognition and Understanding Workshop, ASRU 2023

作者： Zhang, Wangyou Yang, Lei Qian, Yanmin Shanghai Jiao Tong University MoE Key Lab of Artificial Intelligence Ai Institute Department of Computer Science and Engineering Shanghai China China

ISBN: (纸本)9798350306897

In recent years, target speaker extraction (TSE) has drawn increasing interest as an alternative to speech separation in realistic applications. While time-domain methods have been widely used in recent studies to achieve high performance, the potential of time-frequency (T-F) domain methods have been less explored. In this paper, we try to fill this gap and propose to incorporate the top-performing T-F domain speech separation method into the TSE framework. We first explore different speaker information fusion methods for the proposed model. In addition to the commonly-used concatenation based fusion, we propose a novel speaker token-based fusion method to fuse the target speaker information. Second, we show that the proposed model can be easily extended for causal processing with strong performance. Experiments on the WSJ0-2mix and LibriMix benchmarks show that our proposed model outperforms the widely-used time-domain models in both causal and non-causal settings by a large margin. © 2023 IEEE.

关键词： Extraction

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Outage Prediction and Improvement in 6G for UAV Swarm Relays Using Machine Learning

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Progress In Electromagnetics Research B 2024年 107卷 33-45页

作者： Khalil, Hisham Ali, Gauhar Rahman, Saeed Ur Asim, Muhammad Affendi, Mohammed El Department of Intelligent Systems Faculty of Information Technology University of Lahore Pakistan EIAS Data Science and Block chain Lab College of Computer and Information Sciences Prince Sultan University Riyadh11586 Saudi Arabia School of Electronic Engineering Xidian University Xi’an China

The issue of signal outages in sub-THz frequency communication for future 6G networks is addressed by this research. A machine learning method is proposed, employing Random Forest and K-Means algorithms to predict the optimal frequency band and outage probabilities for UAV relays. Both space and frequency diversity are explored to enhance signal strength, and metasurface-carrying UAVs are introduced with a 16 × 16 mm2 design. This design significantly reduces the predicted outage probability from 0.1% to 0.0178%. Finally, triangular and hexagonal UAV swarm formations with metasurfaces are investigated, demonstrating improved performance through heatmap results. © (2024), (Electromagnetics Academy). All rights reserved.

关键词： Unmanned aerial vehicles (UAV)

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Enhancing Post-Stroke Upper Limb Rehabilitation Through Haptic Feedback in Virtual Reality-Based Gaming

Enhancing Post-Stroke Upper Limb Rehabilitation Through Hapt...

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2024 IEEE International Conference on Robotics and Biomimetics, ROBIO 2024

作者： Pillai, Branesh M. Siripala, Napas Sai-Aroon, Kongtup Sivaraman, Dileep Vinjamuri, Ramana Chumnanvej, Sorayouth Suthakorn, Jackrit Mahidol University Faculty of Engineering Department of Biomedical Engineering Thailand University of Maryland Baltimore County Vinjamuri lab in the Department of Computer Science and Electrical Engineering BaltimoreMD21250 United States Mahidol University Neurosurgery Division Faculty of Medicine Ramathibodi Hospital Department of Surgery Bangkok Thailand

ISBN: (纸本)9781665481090

This preliminary study explores developing and implementing upper-limb rehabilitation tools utilizing haptic feedback and 3D spatial recognition analysis in a virtual reality (VR) environment. The effectiveness of upper limb rehabilitation in post-stroke patients was investigated by analyzing the joint and gimbal range of motion (ROM), ROM ratios, and force distribution through various drawing tasks. This study evaluated the impact of different drawing patterns on joint and gimbal ROM, and the force applied during rehabilitation exercises. This study revealed significant variability in ROM across different tasks by combining ROM measurements with force data and employing heat maps for visual representation. These findings emphasize the need for task-specific adjustments to improve rehabilitation outcomes. This study highlights the potential of incorporating advanced technologies, such as VR-based tools with haptic feedback and 3D spatial recognition, to enhance patient engagement and rehabilitation effectiveness. © 2024 IEEE.

关键词： Neuromuscular rehabilitation

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PERFORMANCE ANALYSIS OF VLC-BASED LI-FI NLOS UNDERWATER CHANNEL USING ASK MODULATION SCHEME OVER WDM UNDER THE INFLUENCE OF AMBIENT LIGHT

PERFORMANCE ANALYSIS OF VLC-BASED LI-FI NLOS UNDERWATER CHAN...

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2025 International Conference on Energy, Power, Environment, Control and Computing, ICEPECC 2025

作者： Umer, Rao Behram Mushtaq, Farhan Khan, Faisal Hammad Nouman, Muhammad Hassan, Usman Amanullah Adnan, Muhammad Photonics And Communication Lab Department of Electrical Engineering University of Engineering & Technology Taxila Pakistan Electronics and Communication Systems Lab Department of Telecommunication Engineering University of Engineering & Technology Taxila Pakistan School of Electrical Engineering and Computer Science National University of Sciences and Technology Islamabad Pakistan

ISBN: (纸本)9781837243235

Li-Fi is another term for Visible light communication (VLC) which operates by transmitting data through free space by using either Light Emitting Diodes (LEDs) or Laser Diodes (LDs). The technique finds substantial applications in scientific research as well as military applications when used underwater. VLC technology helps eliminate radio interference alongside providing replacement solutions for traditional underwater communication systems. The research develops and models a visible light wireless communication system through ambient light testing with two 550 nm and 450 nm LD light sources and Pin photodetector over 10 meters using Opti System software. The system uses Non-Return-to-Zero On-Off Keying (NRZ OOK) also known as Amplitude Shift Keying (ASK) modulation through Mach-Zehnder Modulator with WDM technology in NLOS environment. A 10 Gbps data transmission occurs through the clear ocean environment along a 10-meter channel with 0.0405 1/m absorption and 0.0025 1/m scattering. The 550 nm transmitted source emits its maximum Quality factor as 8.35 when BER analyzers operate under ambient light conditions and produce its minimum BER as 4.89e-11 under the same conditions. Examining similar ambient light influences reveals the BER analyzers demonstrate a maximum Quality factor of 8.62 and minimum BER of 18.11e-12 when operating under 450 nm transmitted light. © The Institution of engineering & Technology 2025.

关键词： BIT ERROR RATE LASER DIODE LI-FI QUALITY FACTOR UNDERWATER WIRELESS COMMUNICATION

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Light gradient boosting machine with optimized hyperparameters for identification of malicious access in IoT network

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Digital Communications and Networks 2023年第1期9卷 125-137页

作者： Debasmita Mishra Bighnaraj Naik Janmenjoy Nayak Alireza Souri Pandit Byomakesha Dash S.Vimal Department of Computer Application Veer Surendra Sai University of TechnologyBurlaSambalpur768018OdishaIndia Department of Computer Science Maharaja Sriram Chandra Bhanja Deo(MSCB)UniversityBaripada757003OdishaIndia Department of Software Engineering HaliçUniversity34394IstanbulTurkey Department of Information Technology Aditya Institute of Technology and Management(AITAM)Tekkali532201Andhra PradeshIndia Data Analytics Lab Department of Artificial Intelligence and Data ScienceRamco Institute of TechnologyNorth Venganallur VillageRajapalayam 626117 Virudhunagar DistrictTamilnaduIndia

In this paper,an advanced and optimized Light Gradient Boosting Machine(LGBM)technique is proposed to identify the intrusive activities in the Internet of Things(IoT)*** followings are the major contributions:i)An optimized LGBM model has been developed for the identification of malicious IoT activities in the IoT network;ii)An efficient evolutionary optimization approach has been adopted for finding the optimal set of hyper-parameters of LGBM for the projected ***,a Genetic Algorithm(GA)with k-way tournament selection and uniform crossover operation is used for efficient exploration of hyper-parameter search space;iii)Finally,the performance of the proposed model is evaluated using state-of-the-art ensemble learning and machine learning-based model to achieve overall generalized performance and *** outcomes reveal that the proposed approach is superior to other considered methods and proves to be a robust approach to intrusion detection in an IoT environment.

关键词： IoT security Ensemble method Light gradient boosting machine Machine learning Intrusion detection

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A Neuro-Fuzzy Approach to Road Traffic Congestion Prediction

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computers, Materials & Continua 2022年第10期73卷 295-310页

作者： Mohammed Gollapalli Atta-ur-Rahman Dhiaa Musleh Nehad Ibrahim Muhammad Adnan Khan Sagheer Abbas Ayesha Atta Muhammad Aftab Khan Mehwash Farooqui Tahir Iqbal Mohammed Salih Ahmed Mohammed Imran BAhmed Dakheel Almoqbil Majd Nabeel Abdullah Omer Department of Computer Information System(CIS) College of Computer Science and Information Technology(CCSIT)Imam Abdulrahman Bin Faisal UniversityDammam31441Saudi Arabia Department of Computer Science(CS) College of Computer Science and Information Technology(CCSIT)Imam Abdulrahman Bin Faisal UniversityDammam31441Saudi Arabia Pattern Recognition and Machine Learning Lab Department of Software EngineeringGachon UniversityInchonKorea Department of Computer Science National College of Business Administration and EconomicsLahorePunjab54000Pakistan Department of Computer Science Government College University(GCU)LahorePunjab54000Pakistan Department of Computer Engineering(CE) College of Computer Science and Information Technology(CCSIT)Imam Abdulrahman Bin Faisal UniversityDammam31441Saudi Arabia College of Business Administration Imam Abdulrahman Bin Faisal UniversityDammam31441Saudi Arabia Department of Networks and Communications(NC) College of Computer Science and Information Technology(CCSIT)Imam Abdulrahman Bin Faisal UniversityDammam31441Saudi Arabia

The fast-paced growth of artificial intelligence applications provides unparalleled opportunities to improve the efficiency of various *** as the transportation sector faces many obstacles following the implementation and integration of different vehicular and environmental aspects *** congestion is among the major issues in this regard which demands serious attention due to the rapid growth in the number of vehicles on the *** address this overwhelming problem,in this article,a cloudbased intelligent road traffic congestion prediction model is proposed that is empowered with a hybrid Neuro-Fuzzy *** aim of the study is to reduce the delay in the queues,the vehicles experience at different road junctions across the *** proposed model also intended to help the automated traffic control systems by minimizing the congestion particularly in a smart city environment where observational data is obtained from various implanted Internet of Things(IoT)sensors across the *** due preprocessing over the cloud server,the proposed approach makes use of this data by incorporating the neuro-fuzzy ***,it possesses a high level of accuracy by means of intelligent decision making with minimum error *** results reveal the accuracy of the proposed model as 98.72%during the validation phase in contrast to the highest accuracies achieved by state-of-the-art techniques in the literature such as 90.6%,95.84%,97.56%and 98.03%,*** far as the training phase analysis is concerned,the proposed scheme exhibits 99.214% accuracy. The proposed prediction modelis a potential contribution towards smart cities environment.

关键词： Neuro-fuzzy machine learning congestion prediction AI cloud computing smart cities

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A Global Best-guided Firefly Algorithm for engineering Problems

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Journal of Bionic engineering 2023年第5期20卷 2359-2388页

作者： Mohsen Zare Mojtaba Ghasemi Amir Zahedi Keyvan Golalipour Soleiman Kadkhoda Mohammadi Seyedali Mirjalili Laith Abualigah Department of Electrical Engineering Faculty of EngineeringJahrom UniversityJahrom***FrasIran Department of Electronics and Electrical Engineering Shiraz University of TechnologyShiraz***Iran Department of Electrical and Computer Engineering Tarbiat Modares UniversityTehran***Iran Department of Computer Engineering Sari BranchIslamic Azad UniversitySari***Iran Department of Electrical Engineering Urmia BranchIslamic Azad UniversityUrmia571696896Iran Centre for Artificial Intelligence Research and Optimisation Torrens University AustraliaBrisbaneQLD4006Australia Yonsei Frontier Lab Yonsei UniversitySeoul03722South Korea Computer Science Department Prince Hussein Bin Abdullah Faculty for Information TechnologyAl Al-Bayt UniversityMafraq25113Jordan Hourani Center for Applied Scientific Research Al-Ahliyya Amman UniversityAmman19328Jordan Faculty of Information Technology Middle East UniversityAmman11831Jordan School of Computer Sciences Universiti Sains Malaysia11800George TownPulau PinangMalaysia University Research and Innovation Center Obuda University1034BudapestHungary School of Engineering and Technology Sunway University MalaysiaPetaling Jaya27500Malaysia Applied science research center Applied science private universityAmman11931Jordan

The Firefly Algorithm(FA)is a highly efficient population-based optimization technique developed by mimicking the flashing behavior of fireflies when *** article proposes a method based on Differential Evolution(DE)/current-to-best/1 for enhancing the FA's movement *** proposed modification increases the global search ability and the convergence rates while maintaining a balance between exploration and exploitation by deploying the global best ***,employing the best solution can lead to premature algorithm convergence,but this study handles this issue using a loop adjacent to the algorithm's main ***,the suggested algorithm’s sensitivity to the alpha parameter is reduced compared to the original *** GbFA surpasses both the original and five-version of enhanced FAs in finding the optimal solution to 30 CEC2014 real parameter benchmark problems with all selected alpha ***,the CEC 2017 benchmark functions and the eight engineering optimization challenges are also utilized to evaluate GbFA’s efficacy and robustness on real-world problems against several enhanced *** all cases,GbFA provides the optimal result compared to other *** that the source code of the GbFA algorithm is publicly available at https://***/projects/gbfa.

关键词： Firefly algorithm New movement vector Global best-guided firefly algorithm Global optimization engineering design

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Quantum Algorithms and Lower Bounds for Finite-Sum Optimization 41

Quantum Algorithms and Lower Bounds for Finite-Sum Optimizat...

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41st International Conference on Machine Learning, ICML 2024

作者： Zhang, Yexin Zhang, Chenyi Fang, Cong Wang, Liwei Li, Tongyang School of Electronics Engineering and Computer Science Peking University China Computer Science Department Stanford University United States National Key Lab of General Artificial Intelligence School of Intelligence Science and Technology Peking University China Institute for Artificial Intelligence Peking University China Center on Frontiers of Computing Studies Peking University China School of Computer Science Peking University China

Finite-sum optimization has wide applications in machine learning, covering important problems such as support vector machines, regression, *** this paper, we initiate the study of solving finite-sum optimization problems by quantum ***, let f1, ..., fn : d → be -smooth convex functions and ψ: d → be a µ-strongly convex proximal *** goal is to find an ϵ-optimal point for F(x) = n1 Pni=1 fi(x) + ψ(x).We give a quantum algorithm with complexity Õ(Equation presented) 1 improving the classical tight bound (Equation presented).We also prove a quantum lower bound Ω˜(n + n3/4(/µ)1/4) when d is large *** our quantum upper and lower bounds can extend to the cases where ψ is not necessarily strongly convex, or each fi is Lipschitz but not necessarily *** addition, when F is nonconvex, our quantum algorithm can find_an ϵ-critial point using (Equation presented) queries. Copyright 2024 by the author(s)

关键词： Quantum computers

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