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arXiv 2024年

作者： Park, Hyeryun Kwak, Jeongwon Jang, Dongsuk Park, Sumin Choi, Jinwook Interdisciplinary Program for Bioengineering Graduate School Seoul National University Korea Republic of Integrated Major in Innovative Medical Science Graduate School Seoul National University Korea Republic of Department of Biomedical Engineering College of Medicine Seoul National University Korea Republic of Medical Research Center Institute of Medical and Biological Engineering Seoul National University Korea Republic of

Fact-checking techniques can mitigate hallucinations in Large Language Models (LLMs), a prominent issue in specialized domains. As parameter-efficient techniques such as Low-Rank Adaptation (LoRA) can overcome substantial computational overhead, some studies have explored the integration of multiple LoRAs. While previous studies focus on parallel integration, this paper investigates methods to establish connections among multiple LoRAs. We create three reasoning datasets tailored to fact-checking and fine-tune individual LoRAs, allowing them to view and reason from diverse perspectives. Then, we explore strategies for allocating these reasoning LoRAs and introduce LoraMap, an approach to map connections between them. The results of the fact-checking task demonstrate that the performance of LoraMap is superior to LoraHub, an existing method for integrating LoRAs. LoraMap also outperforms with significantly fewer trainable parameters than LoraConcat, which concatenates LoRAs and further fine-tunes them. Copyright © 2024, The Authors. All rights reserved.

关键词： Problem oriented languages

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A physical picture of liquid–liquid phase separation of proteins

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Journal of Molecular Liquids 2025年 424卷

作者： Kinoshita, Masahiro Hayashi, Tomohiko Nakamura, Yuka Yoshimori, Akira Katahira, Masato Nagata, Takashi Department of Chemistry of Science Chiba University 1-33 Yayoi-cho Inage Chiba263-8522 Japan Institute of Advanced Energy Kyoto University Kyoto Uji611-0011 Japan Interdisciplinary Program of Biomedical Engineering Assistive Technology and Art and Sports Sciences Faculty of Engineering Niigata University 8050 Ikarashi 2-no-cho Nishi-ku Niigata950-2181 Japan Department of Physics Niigata University Niigata950-2181 Japan

Liquid-liquid phase separation (LLPS) of proteins, by which they assemble and partition into a protein-dense phase and a protein-dilute phase, has caught much attention due to its essential roles in a variety of biological processes. Nevertheless, its mechanism remains to be unveiled. Here we develop a physical picture covering almost all the aspects of LLPSs of diverse systems. In our view, when only the proteins are looked at, one of the two phases is liquid-like and the other is gas-like. We relate LLPS to gas–liquid phase separation (GLPS) of simple fluids wherein the pivotal quantity is kBT (kB is the Boltzmann constant and T is the absolute temperature) divided by the absolute value of the minimum of interaction potential between fluid particles. GLPS occurs only if the pivotal quantity is sufficiently small. For LLPS, the interaction potential must be replaced by the potential of mean force (PMF) between protein molecules in aqueous solution. We do not explicitly consider aqueous solution, and its influence on properties of protein molecules is incorporated in PMF. PMF can reach its deep minimum when the two protein molecules associate. A physical interpretation is given for GLPS from a statistical-mechanics point of view, and it is extended to LLPS. In the extension, we discuss not only the similarities between the two phase separations but also the physical factors to be taken into account only in LLPS due to the fact that proteins are large molecules possessing polyatomic structures and they are immersed in aqueous solution. LLPS can be categorized as a biological self-assembly process. By reconsidering the results obtained in our earlier studies on biological self-assembly processes, we specify the entropic and energetic factors driving or opposing coacervation (association) of protein molecules followed by LLPS. We clarify the differences between LLPSs of folded proteins (i.e., proteins in the native states) and intrinsically disordered proteins. There c

关键词： Alkali halides

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Circularly polarized luminescent self-organized helical superstructures:From materials and stimulus-responsiveness to applications

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Aggregate 2021年第6期2卷 60-81页

作者： Yanrong He Siyang Lin Jinbao Guo Quan Li Key Laboratory of Carbon Fibers and Functional Polymers Ministry of Educationand College of Materials Science and EngineeringBeijing University of Chemical TechnologyBeijingChina Institute of Advanced Materials School of Chemistry and Chemical Engineeringand Jiangsu Province Hi-Tech Key Laboratory for Biomedical ResearchSoutheast UniversityNanjingChina Advanced Materials and Liquid Crystal Institute and Chemical Physics Interdisciplinary Program Kent State UniversityKentOhioUSA

Circularly polarized luminescence(CPL)has gained considerable attention in various systems and has rapidly developed into an emerging research *** meet the needs of actual applications in diverse fields,a high luminescence dissymmetry factor(glum)and tunable optical performance of CPL would be the most urgent pursuit for ***,many emerging CPL materials and various strategies have been developed to address these critical *** cholesteric liquid crystals(CLCs),that is,luminescent self-organized helical superstructures,are considered to be ideal candidates for constructing CPL-active materials,as they not only exhibit high glum values,but also enable flexible optical control of *** review mainly summarizes the characteristics of CPL based on CLCs as the bulk phase doped with different emitters,including aggregated induced emission molecules,conventional organic small molecules,polymer emitters,metal-organic complex emitters,and luminescent *** addition,the recent significant progress in stimulus-responsive CPL based on emissive CLCs in terms of several types of stimuli,including light,electricity,temperature,mechanical force,and multiple stimuli is ***,a short perspective on the opportunities and challenges associated with CPL-active materials based on the CLC field is *** review is anticipated to offer new insights and guidelines for developing CLC-based CPL-active materials for broader applications.

关键词： amplifying dissymmetry factor cholesteric liquid crystal circularly polarized luminescence self-organized helical superstructure stimulus-responsiveness

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PD-1 blockade-unresponsive human tumor-infiltrating CD8^(+)T cells are marked by loss of CD28 expression and rescued by IL-15

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Cellular & Molecular Immunology 2021年第2期18卷 385-397页

作者： Kyung Hwan Kim Hong Kwan Kim Hyung-Don Kim Chang Gon Kim Hoyoung Lee Ji Won Han Seong Jin Choi Seongju Jeong Minwoo Jeon Hyunglae Kim Jiae Koh Bo Mi Ku Su-Hyung Park Myung-Ju Ahn Eui-Cheol Shin Graduate School of Medical Science and Engineering Korea Advanced Institute of Science and TechnologyDaejeonRepublic of Korea Department of Thoracic and Cardiovascular Surgery Samsung Medical CenterSungkyunkwan University School of MedicineSeoulRepublic of Korea Biomedical Science and Engineering Interdisciplinary Program Korea Advanced Institute of Science and TechnologyDaejeonRepublic of Korea Research Institute for Future Medicine Samsung Medical CenterSungkyunkwan University School of MedicineSeoulRepublic of Korea Department of Radiation Oncology Yonsei Cancer CenterYonsei University College of MedicineSeoulRepublic of Korea Division of Hematology-Oncology Department of MedicineSamsung Medical CenterSungkyunkwan University School of MedicineSeoulRepublic of Korea

Blockade of programmed death-1(PD-1)reinvigorates exhausted CD8^(+)T cells,resulting in tumor regression in cancer ***,reinvigoration of exhausted CD8^(+)T cells following PD-1 blockade was shown to be CD28-dependent in mouse ***,we examined the role of CD28 in anti-PD-1 antibody-induced human T cell reinvigoration using tumor-infiltrating CD8^(+)T cells(CD8^(+)TILs)obtained from non-small-cell lung cancer ***-cell analysis demonstrated a distinct expression pattern of CD28 between mouse and human CD8^(+)***,we found that human CD28^(+)CD8^(+)but not CD28^(–)CD8^(+)TILs responded to PD-1 blockade irrespective of B7/CD28 blockade,indicating that CD28 costimulation in human CD8^(+)TILs is dispensable for PD-1 blockade-induced reinvigoration and that loss of CD28 expression serves as a marker of anti-PD-1 antibody-unresponsive CD8^(+)*** and phenotypically,PD-1 blockade-unresponsive human CD28^(–)PD-1^(+)CD8^(+)TILs exhibited characteristics of terminally exhausted CD8^(+)T cells with low TCF1 ***,CD28^(–)PD-1^(+)CD8^(+)TILs had preserved machinery to respond to IL-15,and IL-15 treatment enhanced the proliferation of CD28^(–)PD-1^(+)CD8^(+)TILs as well as CD28^(+)PD-1^(+)CD8^(+)*** together,these results show that loss of CD28 expression is a marker of PD-1 blockade-unresponsive human CD8^(+)TILs with a TCF1–signature and provide mechanistic insights into combining IL-15 with anti-PD-1 antibodies.

关键词： anti-PD-1 T cells TCF1 CD28 IL-15

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Wireless,multimodal sensors for continuous measurement of pressure,temperature,and hydration of patients in wheelchair

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npj Flexible Electronics 2023年第1期7卷 479-493页

作者： Seokjoo Cho Hyeonseok Han Hyunwoo Park Sung-Uk Lee Jae-Hwan Kim Sung Woo Jeon Mengqiu Wang Raudel Avila Zhaoqian Xi Kabseok Ko Minsu Park Jungyup Lee Myungwoo Choi Je-Sang Lee Weon Gi Min Byeong-Ju Lee Soyeong Lee Jungrak Choi Jimin Gu Jaeho Park Min Seong Kim Junseong Ahn Osman Gul Chankyu Han Gihun Lee Seunghwan Kim Kyuyoung Kim Jeonghyun Kim Chang-Mo Kang Jahyun Koo Sung Soo Kwak Sungbong Kim Dong Yun Choi Seokwoo Jeon Hyung Jin Sung Yong Bae Park Minkyu Je Young Tae Cho Yong Suk Oh Inkyu Park Department of Mechanical Engineering Korea Advanced Institute of Science and TechnologyDaejeon 34141Republic of Korea School of Electrical Engineering Korea Advanced Institute of Science and TechnologyDaejeon 34141Republic of Korea Advanced 3D Printing Technology Development Division Korea Atomic Energy Research InstituteDaejeon 34057Republic of Korea Department of Electrical and Computer Engineering University of Illinois at Urbana-ChampaignUrbanaIL 61801USA State Key Laboratory of Structural Analysis for Industrial Equipment Department of Engineering MechanicsDalian University of TechnologyDalian 116023P.R.China Department of Mechanical Engineering Northwestern UniversityEvanstonIL 60208USA DUT-BSU Joint Institute Dalian University of TechnologyDalian 116023China Ningbo Institute of Dalian University of Technology Ningbo 315016China Department of Electronics Engineering Kangwon National UniversityChuncheon 24341Republic of Korea Querrey-Simpson Institute for Bioelectronics Northwestern UniversityEvanstonIL 60208USA Sibel Health Inc NilesIL 60714USA Department of Materials Science and Engineering KAIST Institute for The Nanocentury(KINC)Korea Advanced Institute of Science and TechnologyDaejeon 34141Republic of Korea Department of Rehabilitation Medicine Gimhae Hansol Rehabilitation&Convalescent HospitalGimhae 50924Republic of Korea Department of planning and development Gimhae Hansol Rehabilitation&Convalescent HospitalGimhae 50924Republic of Korea Department of rehabilitation medicine Pusan national university hospitalBusan 49241Republic of Korea Department of AI Convergence Network Ajou UniversitySuwon 16499Republic of Korea Department of Electronic Convergence Engineering Kwangwoon UniversitySeoul 01897Republic of Korea Korea Photonics Technology Institute Gwangju 61007Republic of Korea School of Biomedical Engineering Korea UniversitySeoul 02841Republic of Korea Interdisciplinary Program in Precision Public Health Korea UniversitySeoul 02841Republic of Korea Center

Individuals who are unable to walk independently spend most of the day in a *** population is at high risk for developing pressure injuries caused by ***,early diagnosis and prevention of these injuries still remain ***,we introduce battery-free,wireless,multimodal sensors and a movable system for continuous measurement of pressure,temperature,and hydration at skin *** device design includes a crack-activated pressure sensor with nanoscale encapsulations for enhanced sensitivity,a temperature sensor for measuring skin temperature,and a galvanic skin response sensor for measuring skin hydration *** movable system enables power harvesting,and data communication to multiple wireless devices mounted at skin-cushion interfaces of wheelchair users over full body *** evaluations and numerical simulations of the devices,together with clinical trials for wheelchair patients,demonstrate the feasibility and stability of the sensor system for preventing pressure injuries caused by sitting.

关键词： injuries modal mounted

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Label-Free and Liquid State Sers Detection of Multi-Scaled Bioanalytes Via Light-Induced Pinpoint Colloidal Assembly

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SSRN 2024年

作者： Han, Seungyeon Park, Junhee Moon, Sunghyun Eom, Seonghyeon Jin, Chang Min Kim, Seungmin Ryu, Yong-Sang Choi, Yeonho Lee, Jong Bum Choi, Inhee Department of Life Science University of Seoul Seoul02504 Korea Republic of Department of Chemical Engineering University of Seoul Seoul02504 Korea Republic of Department of Biomedical Engineering Korea University Seoul02481 Korea Republic of Interdisciplinary Program in Precision Public Health Korea University Seoul02481 Korea Republic of Exopert Corporation Seoul02580 Korea Republic of Department of Applied Chemistry University of Seoul Seoul02504 Korea Republic of

Surface-enhanced Raman scattering (SERS) has been extensively applied to detect complex analytes due to its ability to enhance the fingerprint signals of molecules around nanostructured metallic surfaces. Thus, it is essential to design SERS-active nanostructures with abundant electromagnetic hotspots in a probed volume according to the dimensions of the analytes, as the analytes must be located in their hotspots for maximum signal enhancement. Herein, we demonstrate a simple method for detecting robust SERS signals from multi-scaled bioanalytes, regardless of their dimensions in the liquid state, through a photothermally driven co-assembly with colloidal plasmonic nanoparticles as signal enhancers. Under resonant light illumination, plasmonic nanoparticles and analytes in the solution quickly assemble at the focused surface area by convective movements induced by the photothermal heating of the plasmonic nanoparticles without any surface modification. Such collective assemblies of plasmonic nanoparticles and analytes were optimized by varying the optical density and surface charge of the nanoparticles, the viscosity of the solvent, and the light illumination time to maximize the SERS signals. Using these light-induced co-assemblies, the intrinsic SERS signals of small biomolecules can be detected down to nanomolar concentrations based on their fingerprint spectra. Furthermore, large-sized biomarkers, such as viruses and exosomes, were successfully detected without labels, and the complexity of the collected spectra was statistically analyzed using t-distributed stochastic neighbor embedding combined with support vector machine (t-SNE+SVM). The proposed method is expected to provide a robust and convenient method to sensitively detect biologically and environmentally relevant analytes at multiple scales in liquid samples. © 2024, The Authors. All rights reserved.

关键词： Viruses

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biomedical data and AI

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science China Life sciences 2025年第5期68卷 1536-1540页

作者： Hao Xu Shibo Zhou Zefeng Zhu Vincenzo Vitelli Liangyi Chen Ziwei Dai Ning Yang Luhua Lai Shengyong Yang Sergey Ovchinnikov Zhuoran Qiao Sirui Liu Chen Song Jianfeng Pei Han Wen Jianfeng Feng Yaoyao Zhang Zhengwei Xie Yang-Yu Liu Zhiyuan Li Fulai Jin Hao Li Mohammad Lotfollahi Xuegong Zhang Ge Yang Shihua Zhang Ge Gao Pulin Li Qi Liu Jing-Dong Jackie Han Peking-Tsinghua Center for Life Sciences (CLS) Academy for Advanced Interdisciplinary StudiesPeking University Center for Quantitative Biology (CQB) Academy for Advanced Interdisciplinary StudiesPeking University Peking University-Tsinghua University-National Institute of Biological Sciences Joint Graduate Program Academy for Advanced Interdisciplinary StudiesPeking University Department of Physics University of Chicago School of Life Sciences Southern University of Science and Technology Peking University Chengdu Academy for Advanced Interdisciplinary Biotechnologies College of Chemistry and Molecular Engineering Peking University Department of Biotherapy Cancer Center and State Key Laboratory of BiotherapyWest China HospitalSichuan University Department of Biology Massachusetts Institute of Technology Lambic Therapeutics Inc. Changping Laboratory Al for Science Institute Key Laboratory of Computational Neuroscience and Brain-Inspired Intelligence Fudan University Department of Obstetrics and Gynecology West China Second University HospitalSichuan University Peking University International Cancer Institute and Peking University-Yunnan Baiyao International Medical Institute and State Key Laboratory of Natural and Biomimetic Drugs Department of Molecular and Cellular PharmacologySchool of Pharmaceutical SciencesPeking University Health Science CenterPeking University Channing Division of Network Medicine Department of MedicineBrigham and Women's Hospital and Harvard Medical School Center for Artificial Intelligence and Modeling the Carl R.Woese Institute for Genomic BiologyUniversity of Illinois Urbana-Champaign Department of Genetics and Genome Sciences School of Medicine and Department of Computer and Data Sciences and Department of Population and Quantitative Health SciencesCase Western Reserve University Department of Biochemistry and Biophysics University of California Sanger Institute Department of Automation Tsinghua University State Key Laboratory of Multimodal Artificial Intelligence Systems I

The development of artificial intelligence(AI) and the mining of biomedical data complement each other. From the direct use of computer vision results to analyze medical images for disease screening, to now integrating biological knowledge into models and even accelerating the development of new AI based on biological discoveries, the boundaries of both are constantly expanding, and their connections are becoming closer.

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High performance gamma-ray spectrometer based on Cs3Cu2I5 single crystal grown by room-temperature vacuum solvent-evaporation method

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Journal of Alloys and Compounds 2025年 1027卷

作者： Seo, Jiwon Song, Seungho Park, Minhwan Byun, Jangwon Park, Beomjun Park, Chansun Jang, Mee Yeom, Jung-Yeol Dept. of Health and Safety Convergence Science Korea University Seoul02841 Korea Republic of Interdisciplinary Program in Precision Public Health Korea University Seoul02841 Korea Republic of Dept. of Bioengineering Korea University Seoul02841 Korea Republic of Dept. of Materials Science and Engineering Korea University Seoul02841 Korea Republic of The Institute for High Technology Materials and Devices Korea University Seoul02841 Korea Republic of Global Health Technology Center Korea University Seoul02841 Korea Republic of Daejeon34057 Korea Republic of School of Biomedical Engineering Korea University Seoul02841 Korea Republic of

In this study, the properties of Cs3Cu2I5 (CCI) crystals grown using the Slow Vacuum Evaporation Technique (SVET) were examined. Crystals were grown at room temperature (300 K, 27 °C) under vacuum conditions, producing single crystals with maximum diameter of 13 mm over 23 days. We confirmed excellent crystallinity via X-ray diffraction (XRD), compositional uniformity via X-ray photoelectron spectroscopy (XPS), and homogeneity via electron probe micro analyzer (EPMA). UV-Vis measurements indicated a high transmittance of 83 % and a bandgap of 3.64 eV. The Stokes shift of 110 nm, smaller than previously reported values, contributed to faster decay times and improved low-energy detection feasibility. Time-resolved photoluminescence (TR-PL) showed a rapid decay component (4.1 ns), accounting for 95.11 % of the total decay, demonstrating superior properties compared to existing reports. The gamma-ray detection capabilities of the CCI crystals were evaluated using six radioactive sources (Am-241, Ba-133, Co-57, Na-22, Cs-137, and Mn-54), achieving excellent energy resolution, including 5.2 % at 662 keV. The crystals displayed a highly linear response to gamma radiation (R² = 0.99998) with a light yield of 55,613 photons/MeV. Moreover, assessments of multiple crystals grown under identical conditions showed consistent performance with a coefficient of variation (CV) of 1.23 %. These findings confirm that SVET is a highly effective and cost-efficient method for producing high-quality CCI crystals, offering significant advantages over other growth techniques. © 2025 Elsevier B.V.

关键词： Gamma ray spectrometers

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Naked-eye observation of water-forming reaction on palladium etalon:transduction of gas-matter reaction into light-matter interaction

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PhotoniX 2023年第1期4卷 349-363页

作者： Jongsu Lee Eui-Sang Yu Taehyun Kim In Soo Kim Seok Chung Seung Jae Kwak Won Bo Lee Yusin Pak Yong-Sang Ryu Sensor System Research Center Korea Institute of Science and TechnologySeoul 02792Republic of Korea Department of Electrical and Computer Engineering Seoul National UniversitySeoul 08826Republic of Korea Smart Materials Research Section Electronics and Telecommunications Research InstituteDaejeon 34129Republic of Korea Department of Micro/Nano Systems Korea University02841 SeoulRepublic of Korea Nanophotonics Research Center Korea Institute of Science and TechnologySeoul 02792Republic of Korea School of Mechanical Engineering Korea UniversitySeoul 02841Republic of Korea School of Chemical and Biological Engineering Seoul National UniversitySeoul 08826Republic of Korea Interdisciplinary Program in Precision Public Health Korea UniversitySeoul 02481Republic of Korea School of Biomedical Engineering Korea UniversitySeoul 02481Republic of Korea

Palladium is the most prominent material in both scientific and industrial research on gas storage,purification,detection,and catalysis due to its unique properties as a catalyst and hydrogen *** the dynamic optical phenomena of palladium reacting with hydrogen,transduction of the gas-matter reaction into light-matter interaction is attempted to visualize the dynamic surface chemistry and reaction *** simple geometry of the metal-dielectric-metal structure,Fabry-Perot etalon,is employed for a colorimetric reactor,to display the catalytic reaction of the exposed gas via water-film/bubble formation at the dielectric/palladium *** adsorption/desorption behavior and catalytic reaction of hydrogen and oxygen on the palladium surface display highly repeatable and dramatic color changes based on two distinct water formation trends:the foggy effect by water bubbles and the whiteout effect by water film *** and experiments demonstrate the robustness of the proposed Fabry-Perot etalon as an excellent platform for monitoring the opto-physical phenomena driven by heterogeneous catalysis.

关键词： Palladium Hydrogen Oxygen Fabry-Perot resonators Colorimetric sensors Water-forming reaction

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Complexity Analysis based on Parietal Fuzzy Entropy to Facilitate ADHD Diagnosis in Young Children

Complexity Analysis based on Parietal Fuzzy Entropy to Facil...

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Annual International Conference of the IEEE engineering in Medicine and Biology Society (EMBC)

作者： I-Wen Huang Yu-Ci Jheng I-Chun Chen Li-Wei Ko Institute of Biomedical Engineering National Yang Ming Chiao Tung University Hsinchu Taiwan Institute of Electrical and Control Engineering National Yang Ming Chiao Tung University Hsinchu Taiwan International Program in Interdisciplinary Neuroscience College of Biological Science and Technology National Yang Ming Chiao Tung University Hsinchu Taiwan Department of Physical Medicine and Rehabilitation Ton-Yen General Hospital Hsinchu Taiwan Drug Development and Value Creation Research Center Kaohsiung Medical University Kaohsiung Taiwan

ISBN: (数字)9798350371499

ISBN: (纸本)9798350371505

Attention deficit hyperactivity disorder (ADHD) is the most common condition affecting the development of neurons in children. Therefore, early and accurate diagnosis of ADHD in young children is of paramount importance. In this study, the 8-channel wireless wearable EEG measurement device was employed to record EEG data from 30 children diagnosed with ADHD and 30 typical development (TD) young children aged 4-7 years. The data was collected both during rest and while the children performed a Kiddie Continuous Performance Test (K-CPT). We extract relative power spectral density (PSD) unaffected by factors like skull resistance and thickness. Additionally, a range of complex entropy values based on the time domain were extracted. These included sample entropy (SaEn), permutation entropy (PeEn), singular value decomposition entropy (SvdEn), and fuzzy entropy (FuEn). We compare the performance of k-Nearest Neighbors (kNN), Support Vector Machine (SVM), and XGBoost, and utilized the sequential forward selection (SFS) feature selection method in the wrapper approach. Through this process, the study identified the most effective EEG data segments and feature subsets. The findings indicated that using a combination of resting and K-CPT EEG data yielded greater discriminability. Notably, the study found that extracting beta power from the right occipital lobe along with fuzzy entropy from the parietal lobe resulted in optimal accuracy of 90% in distinguishing between children with ADHD and TD children. These outcomes highlight the potential of relative PSD and complexity metrics to support the clinical diagnosis of early ADHD. Furthermore, these metrics may contain unique neurobiomarkers that could be valuable for devising early intervention strategies.

关键词： Support vector machines Performance evaluation Pediatrics Accuracy Aging Feature extraction Entropy Electroencephalography Complexity theory Time-domain analysis

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