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检索条件"机构=Bioinformatics Program"
2042 条 记 录,以下是331-340 订阅
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HiPoNet: A Topology-Preserving Multi-View Neural Network For High Dimensional Point Cloud and Single-Cell Data
arXiv
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arXiv 2025年
作者: Viswanath, Siddharth Madhu, Hiren Bhaskar, Dhananjay Kovalic, Jake Johnson, Dave Ying, Rex Tape, Christopher Adelstein, Ian Perlmutter, Michael Krishnaswamy, Smita Department of Computer Science Yale University New Haven United States Department of Genetics Yale University New Haven United States Department of Applied Physics Yale University New Haven United States Program in Computing Boise State University Idaho United States Cell Communication Lab Department of Oncology University College London Cancer Institute London United Kingdom Department of Mathematics Yale University New Haven United States Department of Mathematics Boise State University Idaho United States Computational Biology and Bioinformatics Program Yale University New Haven United States Wu-Tsai Institute Yale University New Haven United States Program for Applied Math Yale University New Haven United States
In this paper, we propose HiPoNet, an end-to-end differentiable neural network for regression, classification, and representation learning on high-dimensional point clouds. Single-cell data can have high dimensionalit... 详细信息
来源: 评论
Drone Application Model for Image Acquisition of Plantation Areas and Oil Palm Trees Counting  7
Drone Application Model for Image Acquisition of Plantation ...
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7th International Conference on Information Management and Technology, ICIMTech 2022
作者: Sastrohartono, Hermantoro Suryotomo, Andiko Putro Saifullah, Shoffan Suparyanto, Teddy Perbangsa, Anzaludin Samsinga Pardamean, Bens Instiper Yogyakarta Faculty of Agricultural Technology Department of Agricultural Engineering Yogyakarta55281 Indonesia Universitas Pembangunan Nasional Veteran Yogyakarta Department of Informatics Yogyakarta55283 Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta11480 Indonesia School of Information Systems Bina Nusantara University Information Systems Department Jakarta11480 Indonesia BINUS Graduate Program - Master of Computer Science Bina Nusantara University Computer Science Department Jakarta11480 Indonesia
The area of oil palm plantations in Indonesia increased by 7% from 14 million ha in 2017 to 15 million ha in 2021. The vast land requires the support of effective and efficient management techniques to maintain sustai... 详细信息
来源: 评论
Genomic data processing with GenomeFlow
arXiv
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arXiv 2025年
作者: Park, Junseok Maury, Eduardo A. Oh, Changhoon Shin, Donghoon Denisko, Danielle Lee, Eunjung Alice Division of Genetics and Genomics Boston Children’s Hospital 3 Blackfan Circle BostonMA United States Department of Pediatrics Harvard Medical School 25 Shattuck St BostonMA United States Bioinformatics Integrative Genomics Program Harvard/MIT MD-PHD Program Harvard Medical School BostonMA United States Program in Medical and Population Genetics Broad Institute of MIT and Harvard CambridgeMA United States Graduate School of Information Yonsei University 50 Yonsei-ro Seodaemun-gu Seoul Korea Republic of Department of Human Centered Design and Engineering University of Washington SeattleWA United States Department of Biomedical Informatics Harvard Medical School BostonMA United States
Advances in genome sequencing technologies generate massive amounts of sequence data that are increasingly analyzed and shared through public repositories. On-demand infrastructure services on cloud computing platform... 详细信息
来源: 评论
Identifying the minimal sets of distance restraints for FRET-assisted protein structural modeling
arXiv
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arXiv 2024年
作者: Liu, Zhuoyi Grigas, Alex T. Sumner, Jacob Knab, Edward Davis, Caitlin M. O’Hern, Corey S. Department of Mechanical Engineering and Materials Science Yale University New HavenCT06520 United States Integrated Graduate Program in Physical and Engineering Biology Yale University New HavenCT06520 United States Graduate Program in Computational Biology and Bioinformatics Yale University New HavenCT06520 United States Department of Chemistry Yale University New HavenCT06520 United States Department of Physics Yale University New HavenCT06520 United States Department of Applied Physics Yale University New HavenCT06520 United States
Proteins naturally occur in crowded cellular environments and interact with other proteins, nucleic acids, and organelles. Since most previous experimental protein structure determination techniques require that prote... 详细信息
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Structural insights into the role of N-terminal integrity in PhoSL for core-fucosylated N-glycan recognition
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International Journal of Biological Macromolecules 2024年 255卷 128309页
作者: Lou, Yuan-Chao Tu, Cheng-Fen Chou, Chun-Chi Yeh, Hsin-Hong Chien, Chia-Yu Sadotra, Sushant Chen, Chinpan Yang, Ruey-Bing Hsu, Chun-Hua Institute of Biomedical Sciences Academia Sinica Taipei115 Taiwan Department of Agricultural Chemistry National Taiwan University Taipei106 Taiwan Chemical Biology and Molecular Biophysics Taiwan International Graduate Program Academia Sinica Taipei115 Taiwan Institute of Bioinformatics and Structural Biology National Tsing Hua University Hsinchu300 Taiwan Biomedical Translation Research Center Academia Sinica Taipei115 Taiwan Ph.D. Program in Drug Discovery and Development Industry College of Pharmacy Taipei Medical University Taipei110 Taiwan Genome and Systems Biology Degree Program National Taiwan University and Academia Sinica Taipei106 Taiwan Institute of Biochemical Sciences National Taiwan University Taipei106 Taiwan Center for Computational and Systems Biology National Taiwan University Taipei106 Taiwan
PhoSL (Pholiota squarrosa Lectin) has an exceptional binding affinity for biomolecules with core-fucosylated N-glycans. This modification involves the addition of fucose to the inner N-acetylglucosamine within the N-g... 详细信息
来源: 评论
Genome data mining approach to identify potential protein in crop plants
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AIP Conference Proceedings 2024年 第1期3026卷
作者: Joko Pebrianto Trinugroho Faisal Asadi Bens Pardamean Bioinformatics & Data Science Research Center Bina Nusantara University Jakarta Indonesia 11480 Computer Science Department BINUS Graduate Program - Master of Computer Science Program Bina Nusantara University Jakarta Indonesia 11480
There is a need to produce more crop plants to meet the future global demand. However, the climate change has affected the global crop yield. Consequently, finding an alternative approach to improve crop yield becomes...
来源: 评论
In vitro activity of imipenem/relebactam, meropenem/vaborbactam and comparators against Enterobacterales from patients with intra-abdominal infections: Results of the study for Monitoring Antimicrobial Resistance Trends (SMART) in Taiwan, 2020
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Journal of Microbiology, Immunology and Infection 2023年 第1期56卷 75-83页
作者: Lee, Yu-Lin Ko, Wen-Chien Hsueh, Po-Ren Department of Internal Medicine Changhua Christian Hospital Changhua Taiwan Institute of Genomics and Bioinformatics National Chung Hsing University Taichung Taiwan Department of Internal Medicine Chung Shan Medical University Hospital Taichung Taiwan Department of Medicine College of Medicine National Cheng Kung University Tainan Taiwan Departments of Laboratory Medicine and Internal Medicine China Medical University Hospital Taichung Taiwan School of Medicine China Medical University Taichung Taiwan Ph.D Program for Aging School of Medicine China Medical University Taichung Taiwan Departments of Laboratory Medicine and Internal Medicine National Taiwan University Hospital National Taiwan University College of Medicine Taipei Taiwan
Background: Multi-drug resistant Enterobacterales is a growing health threat. Imipenem/relebactam and meropenem/vaborbactam, are not clinically used in Taiwan and the susceptibility is lack from routine laboratory tes... 详细信息
来源: 评论
Towards High Generalization Performance on Electrocardiogram Classification
Towards High Generalization Performance on Electrocardiogram...
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2021 Computing in Cardiology, CinC 2021
作者: Han, Hyeongrok Park, Seongjae Min, Seonwoo Choi, Hyun-Soo Kim, Eunji Kim, Hyunki Park, Sangha Kim, Jinkook Park, Junsang An, Junho Lee, Kwanglo Jeong, Wonsun Chon, Sangil Ha, Kwonwoo Han, Myungkyu Yoon, Sungroh Department of Electrical and Computer Engineering Seoul National University Seoul Korea Republic of HUINNO Co. Ltd Seoul Korea Republic of LG AI Research Seoul Korea Republic of Department of Computer Science and Engineering Kangwon National University Chuncheon Korea Republic of Department of Biological Sciences Interdisciplinary Program in Bioinformatics Interdisciplinary Program in Artificial Intelligence ASRI INMC Institute of Engineering Research Seoul National University Seoul Korea Republic of
Recently, many electrocardiogram (ECG) classification algorithms using deep learning have been proposed. The characteristics of ECG vary from dataset to dataset for various reasons (i.e., hospital, race, etc.). Theref... 详细信息
来源: 评论
Data analysis guidelines for single‑cell RNA‑seq in biomedical studies and clinical applications
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Military Medical Research 2023年 第4期10卷 529-553页
作者: Min Su Tao Pan Qiu‑Zhen Chen Wei‑Wei Zhou Yi Gong Gang Xu Huan‑Yu Yan Si Li Qiao‑Zhen Shi Ya Zhang Xiao He Chun‑Jie Jiang Shi‑Cai Fan Xia Li Murray J.Cairns Xi Wang Yong‑Sheng Li State Key Laboratory of Reproductive Medicine Nanjing Medical UniversityNanjing 211166China College of Biomedical Information and Engineering the First Affiliated Hospital of Hainan Medical UniversityHainan Medical UniversityHaikou 571199HainanChina College of Bioinformatics Science and Technology Harbin Medical UniversityHarbin 150081HeilongjiangChina Department of Immunology Nanjing Medical UniversityNanjing 211166China Department of Laboratory Medicine Women and Children’s Hospital of Chongqing Medical UniversityChongqing 401174China Baylor College of Medicine HoustonTX 77030USA Shenzhen Institute for Advanced Study University of Electronic Science and Technology of ChinaShenzhen 518110GuangdongChina School of Biomedical Sciences and Pharmacy Faculty of Health and Medicinethe University of NewcastleUniversity DriveCallaghanNSW 2308Australia Precision Medicine Research Program Hunter Medical Research InstituteNew Lambton HeightsNSW 2305Australia
The application of single-cell RNA sequencing(scRNA-seq)in biomedical research has advanced our understanding of the pathogenesis of disease and provided valuable insights into new diagnostic and therapeutic *** the e... 详细信息
来源: 评论
A Bayesian framework for incorporating exposure uncertainty into health analyses with application to air pollution and stillbirth
arXiv
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arXiv 2022年
作者: Comess, Saskia Chang, Howard H. Warren, Joshua L. Emmett Interdisciplinary Program in Environment and Resources Stanford University StanfordCA94305 United States Department of Biostatistics and Bioinformatics Emory University AtlantaGA30329 United States Department of Biostatistics Yale University New HavenCT06510 United States
Studies of the relationships between environmental exposures and adverse health outcomes often rely on a two-stage statistical modeling approach, where exposure is modeled/predicted in the first stage and used as inpu... 详细信息
来源: 评论