检索结果-内蒙古大学图书馆

Approximation and competitive algorithms for single-minded selling problem 1

12th International Conference on Algorithmic Aspects in Information and Management, AAIM 2018

作者： Chin, Francis Y. L. Poon, Sheung-Hung Ting, Hing-Fung Xu, Dachuan Yu, Dongxiao Zhang, Yong Department of Computer Science The University of Hong Kong Pok Fu Lam Hong Kong School of Computer Science University of Nottingham Ningbo China Ningbo China Beijing Institute for Scientific and Engineering Computing Beijing University of Technology Beijing China Institute of Intelligent Computing School of Computer Science and Technology Shandong University Qingdao266237 China Research Center for High Performance Computing Joint Engineering Research Center for Health Big Data Intelligent Analysis Technology Shenzhen Institutes of Advanced Technology Chinese Academy of Sciences Shenzhen China

ISBN: (数字)9783030046187

ISBN: (纸本)9783030046170

The problem of item selling with the objective of maximizing the revenue is studied. Given a seller with k types of items and n single-minded buyers, i.e., each buyer is only interested in a particular bundle of items, to maximize the revenue, the seller must carefully assign some amount of bundles to each buyer with respect to the buyer’s accepted price. Each buyer bi is associated with a value function vi(·) such that vi(x) is the accepted unit bundle price bi is willing to pay for x bundles. We show that the single-minded item selling problem is NP-hard. Moreover, we give an O(√k)-approximation algorithm. For the online version, i.e., the buyers come one by one and the decision on each buyer must be made before the arrival of the next buyer, an O(√k · (log h + log k))- competitive algorithm is achieved, where h is the highest unit item price among all buyers. © Springer Nature Switzerland AG 2018.

关键词： Sales

来源：评论

学校读者我要写书评

暂无评论

BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets

引用

Nature methods 2023年第6期20卷 824-835页

作者： Linus Manubens-Gil Zhi Zhou Hanbo Chen Arvind Ramanathan Xiaoxiao Liu Yufeng Liu Alessandro Bria Todd Gillette Zongcai Ruan Jian Yang Miroslav Radojević Ting Zhao Li Cheng Lei Qu Siqi Liu Kristofer E Bouchard Lin Gu Weidong Cai Shuiwang Ji Badrinath Roysam Ching-Wei Wang Hongchuan Yu Amos Sironi Daniel Maxim Iascone Jie Zhou Erhan Bas Eduardo Conde-Sousa Paulo Aguiar Xiang Li Yujie Li Sumit Nanda Yuan Wang Leila Muresan Pascal Fua Bing Ye Hai-Yan He Jochen F Staiger Manuel Peter Daniel N Cox Michel Simonneau Marcel Oberlaender Gregory Jefferis Kei Ito Paloma Gonzalez-Bellido Jinhyun Kim Edwin Rubel Hollis T Cline Hongkui Zeng Aljoscha Nern Ann-Shyn Chiang Jianhua Yao Jane Roskams Rick Livesey Janine Stevens Tianming Liu Chinh Dang Yike Guo Ning Zhong Georgia Tourassi Sean Hill Michael Hawrylycz Christof Koch Erik Meijering Giorgio A Ascoli Hanchuan Peng Institute for Brain and Intelligence Southeast University Nanjing China. Microsoft Corporation Redmond WA USA. Tencent AI Lab Bellevue WA USA. Computing Environment and Life Sciences Directorate Argonne National Laboratory Lemont IL USA. Kaya Medical Seattle WA USA. University of Cassino and Southern Lazio Cassino Italy. Center for Neural Informatics Structures and Plasticity Krasnow Institute for Advanced Study George Mason University Fairfax VA USA. Faculty of Information Technology Beijing University of Technology Beijing China. Beijing International Collaboration Base on Brain Informatics and Wisdom Services Beijing China. Nuctech Netherlands Rotterdam the Netherlands. Janelia Research Campus Howard Hughes Medical Institute Ashburn VA USA. Department of Electrical and Computer Engineering University of Alberta Edmonton Alberta Canada. Ministry of Education Key Laboratory of Intelligent Computation and Signal Processing Anhui University Hefei China. Paige AI New York NY USA. Scientific Data Division and Biological Systems and Engineering Division Lawrence Berkeley National Lab Berkeley CA USA. Helen Wills Neuroscience Institute and Redwood Center for Theoretical Neuroscience UC Berkeley Berkeley CA USA. RIKEN AIP Tokyo Japan. Research Center for Advanced Science and Technology (RCAST) The University of Tokyo Tokyo Japan. School of Computer Science University of Sydney Sydney New South Wales Australia. Texas A&M University College Station TX USA. Cullen College of Engineering University of Houston Houston TX USA. Graduate Institute of Biomedical Engineering National Taiwan University of Science and Technology Taipei Taiwan. National Centre for Computer Animation Bournemouth University Poole UK. PROPHESEE Paris France. Department of Neuroscience Columbia University New York NY USA. Mortimer B. Zuckerman Mind Brain Behavior Institute Columbia University New York NY USA. Department of Computer Science Northern Illinois Universit

BigNeuron is an open community bench-testing platform with the goal of setting open standards for accurate and fast automatic neuron tracing. We gathered a diverse set of image volumes across several species that is representative of the data obtained in many neuroscience laboratories interested in neuron tracing. Here, we report generated gold standard manual annotations for a subset of the available imaging datasets and quantified tracing quality for 35 automatic tracing algorithms. The goal of generating such a hand-curated diverse dataset is to advance the development of tracing algorithms and enable generalizable benchmarking. Together with image quality features, we pooled the data in an interactive web application that enables users and developers to perform principal component analysis, t-distributed stochastic neighbor embedding, correlation and clustering, visualization of imaging and tracing data, and benchmarking of automatic tracing algorithms in user-defined data subsets. The image quality metrics explain most of the variance in the data, followed by neuromorphological features related to neuron size. We observed that diverse algorithms can provide complementary information to obtain accurate results and developed a method to iteratively combine methods and generate consensus reconstructions. The consensus trees obtained provide estimates of the neuron structure ground truth that typically outperform single algorithms in noisy datasets. However, specific algorithms may outperform the consensus tree strategy in specific imaging conditions. Finally, to aid users in predicting the most accurate automatic tracing results without manual annotations for comparison, we used support vector machine regression to predict reconstruction quality given an image volume and a set of automatic tracings.

关键词：

来源：评论

学校读者我要写书评

暂无评论

Identifying High Potential Talent: A Neural Network Based Dynamic Social Profiling Approach

Identifying High Potential Talent: A Neural Network Based Dy...

引用

IEEE International Conference on data Mining (ICDM)

作者： Yuyang Ye Hengshu Zhu Tong Xu Fuzhen Zhuang Runlong Yu Hui Xiong Anhui Province Key Lab of Big Data Analysis and Application University of Science and Technology of China Baidu Talent Intelligence Center Baidu Inc Key Lab of Intelligent Information Processing of Chinese Academy of Sciences (CAS) Institute of Computing Technology University of Chinese Academy of Sciences

How to identify high-potential talent (HIPO) earlier in their career always has strategic importance for human resource management. While tremendous efforts have been made in this direction, most existing approaches are still based on the subjective selection of human resource experts. This could lead to unintentional bias and inconsistencies. To this end, in this paper, we propose a neural network based dynamic social profiling approach for quantitatively identifying HIPOs from the newly-enrolled employees by modeling the dynamics of their behaviors in organizational social networks. A basic assumption is that HIPOs usually perform more actively and have higher competencies than their peers to accumulate their social capitals during their daily work practice. Along this line, we first propose to model the social profiles of employees with both Graph Convolutional Network (GCN) and social centrality analysis in a comprehensive way. Then, an adaptive Long Short Term Memory (LSTM) network with global attention mechanism is designed to capture the profile dynamics of employees in the organizational social networks during their early career. Finally, extensive experiments on real-world data clearly validate the effectiveness of our approach as well as the interpretability of our results.

关键词： Social networking (online) Companies Artificial neural networks Germanium Engineering profession

来源：评论

学校读者我要写书评

暂无评论

Residual Networks for Light Field Image Super-Resolution

Residual Networks for Light Field Image Super-Resolution

引用

IEEE/CVF Conference on Computer Vision and Pattern Recognition

作者： Shuo Zhang Youfang Lin Hao Sheng Beijing Key Lab of Traffic Data Analysis and Mining School of Computer and Information Technology Beijing Jiaotong University Key Laboratory of Intelligent Passenger Service of Civil Aviation CAAC State Key Laboratory of Software Development Environment School of Computer Science and Engineering Beihang University Beijing Advanced Innovation Center for Big Data and Brain Computing Beihang University

Light field cameras are considered to have many potential applications since angular and spatial information is captured simultaneously. However, the limited spatial resolution has brought lots of difficulties in developing related applications and becomes the main bottleneck of light field cameras. In this paper, a learning-based method using residual convolutional networks is proposed to reconstruct light fields with higher spatial resolution. The view images in one light field are first grouped into different image stacks with consistent sub-pixel offsets and fed into different network branches to implicitly learn inherent corresponding relations. The residual information in different spatial directions is then calculated from each branch and further integrated to supplement high-frequency details for the view image. Finally, a flexible solution is proposed to super-resolve entire light field images with various angular resolutions. Experimental results on synthetic and real-world datasets demonstrate that the proposed method outperforms other state-of-the-art methods by a large margin in both visual and numerical evaluations. Furthermore, the proposed method shows good performances in preserving the inherent epipolar property in light field images.

关键词：

来源：评论

学校读者我要写书评

暂无评论

Insight-HXMT and GECAM-C observations of the brightest-of-all-time GRB 221009A

arXiv

引用

arXiv 2023年

作者： An, Zheng-Hua Antier, S. Bi, Xing-Zi Bu, Qing-Cui Cai, Ce Cao, Xue-Lei Camisasca, Anna-Elisa Chang, Zhi Chen, Gang Chen, Li Chen, Tian-Xiang Chen, Wen Chen, Yi-Bao Chen, Yong Chen, Yu-Peng Coughlin, Michael W. Cui, Wei-Wei Dai, Zi-Gao Hussenot-Desenonges, T. Du, Yan-Qi Du, Yuan-Yuan Du, Yun-Fei Fan, Cheng-Cheng Frontera, Filippo Gao, He Gao, Min Ge, Ming-Yu Gong, Ke Gu, Yu-Dong Guan, Ju Guo, Dong-Ya Guo, Zhi-Wei Guidorzi, Cristiano Han, Da-Wei He, Jian-Jian He, Jun-Wang Hou, Dong-Jie Huang, Yue Huo, Jia Ji, Zhen Jia, Shu-Mei Jiang, Wei-Chun Kann, David Alexander Klotz, A. Kong, Ling-Da Lan, Lin Li, An Li, Bing Li, Chao-Yang Li, Cheng-Kui Li, Gang Li, Mao-Shun Li, Ti-Pei Li, Wei Li, Xiao-Bo Li, Xin-Qiao Li, Xu-Fang Li, Yan-Guo Li, Zheng-Wei Liang, Jing Liang, Xiao-Hua Liao, Jin-Yuan Lin, Lin Liu, Cong-Zhan Liu, He-Xin Liu, Hong-Wei Liu, Jia-Cong Liu, Xiao-Jing Liu, Ya-Qing Liu, Yu-Rong Lu, Fang-Jun Lu, Hong Lu, Xue-Feng Luo, Qi Luo, Tao Ma, Bin-Yuan Ma, Fu-Li Ma, Rui-Can Ma, Xiang Maccary, Romain Mao, Ji-Rong Meng, Bin Nie, Jian-Yin Orlandini, Mauro Ou, Ge Peng, Jing-Qiang Peng, Wen-Xi Qiao, Rui Qu, Jin-Lu Ren, Xiao-Qin Shi, Jing-Yan Shi, Qi Song, Li-Ming Song, Xin-Ying Su, Ju Sun, Gong-Xing Sun, Liang Sun, Xi-Lei Tan, Wen-Jun Tan, Ying Tao, Lian Tuo, You-Li Turpin, Damien Wang, Jin-Zhou Wang, Chen Wang, Chen-Wei Wang, Hong-Jun Wang, Hui Wang, Jin Wang, Ling-Jun Wang, Peng-Ju Wang, Ping Wang, Wen-Shuai Wang, Xiang-Yu Wang, Xi-Lu Wang, Yu-Sa Wang, Yue Wen, Xiang-Yang Wu, Bo-Bing Wu, Bai-Yang Wu, Hong Xiao, Sheng-Hui Xiao, Shuo Xiao, Yun-Xiang Xie, Sheng-Lun Xiong, Shao-Lin Xiong, Sen-Lin Xu, Dong Xu, He Xu, Yan-Jun Xu, Yan-Bing Xu, Ying-Chen Xu, Yu-Peng Xue, Wang-Chen Yang, Sheng Yang, Yan-Ji Yang, Zi-Xu Ye, Wen-Tao Yi, Qi-Bin Yi, Shu-Xu Yin, Qian-Qing You, Yuan Yu, Yun-Wei Yu, Wei Yu, Wen-Hui Zeng, Ming Zhang, Bing Zhang, Bin-Bin Zhang, Da-Li Zhang, Fan Zhang, Hong-Mei Zhang, Juan Key Laboratory of Particle Astrophysics Institute of High Energy Physics Chinese Academy of Sciences 19B Yuquan Road Beijing100049 China Institut für Astronomie und Astrophysik Kepler Center for Astro and Particle Physics Eberhard Karls Universität Sand 1 Tübingen72076 Germany College of Physics Hebei Key Laboratory of Photophysics Research and Application Hebei Normal University Hebei Shijiazhuang050024 China Department of Physics and Earth Science University of Ferrara Via Saragat 1 Ferrara44122 Italy Department of Astronomy Beijing Normal University Beijing100875 China CAS Key Laboratory for Research in Galaxies and Cosmology Department of Astronomy University of Science and Technology of China Hefei230026 China Department of Astronomy Tsinghua University Beijing100084 China Southwest Jiaotong University Chengdu610092 China INAF Osservatorio di Astrofisica e Scienza dello Spazio di Bologna Via Piero Gobetti 101 Bologna40129 Italy University of Chinese Academy of Sciences Chinese Academy of Sciences Beijing100049 China College of physics Sciences Technology Hebei University No. 180 Wusi Dong Road Lian Chi District Hebei Baoding071002 China INFN - Sezione di Ferrara Via Saragat 1 Ferrara44122 Italy Physics and Space Science College China West Normal University China Yunnan Observatories Chinese Academy of Sciences Yunnan Province Kunming650011 China Key Laboratory of Space Astronomy and Technology National Astronomical Observatories Chinese Academy of Sciences Beijing100012 China School of Astronomy and Space Science Nanjing University Nanjing210093 China School of Physics and Optoelectronics Xiangtan University Yuhu District Hunan Xiangtan411105 China Guizhou Provincial Key Laboratory of Radio Astronomy and Data Processing Guizhou Normal University Guiyang550001 China Institute of Astrophysics Central China Normal University Wuhan430079 China Nevada Center for Astrophysics Department of Physics and Astronomy University of

GRB 221009A is the brightest gamma-ray burst ever detected since the discovery of this kind of energetic explosions. However, an accurate measurement of the prompt emission properties of this burst is very challenging due to its exceptional brightness. With joint observations of Insight-HXMT and GECAM-C, we made an unprecedentedly accurate measurement of the emission during the first ∼1800 s of GRB 221009A, including its precursor, main emission (ME, which dominates the burst in flux), flaring emission and early afterglow, in the hard X-ray to soft gamma-ray band from ∼ 10 keV to ∼ 6 MeV. Based on the GECAM-C unsaturated data of the ME, we measure a record-breaking isotropic equivalent energy (Eiso) of ∼ 1.5 × 1055 erg, which is about eight times the total rest-mass energy of the Sun. The early afterglow data require a significant jet break between 650 s and 1100 s, most likely at ∼ 950 s from the afterglow starting time TAG, which corresponds to a jet opening angle of ∼ 0.7◦ (ηγn)1/8, where n is the ambient medium density in units of cm−3 and ηγ is the ratio between γ-ray energy and afterglow kinetic energy. The beaming-corrected total γ-ray energy Eγ is ∼ 1.15 × 1051 (ηγn)1/4 erg, which is typical for long GRBs. These results suggest that this GRB may have a special central engine, which could launch and collimate a very narrowly beamed jet with an ordinary energy budget, leading to exceptionally luminous gamma-ray radiation per unit solid angle. Alternatively, more GRBs might have such a narrow and bright beam, which are missed by an unfavorable viewing angle or have been detected without distance measurement. Copyright © 2023, The Authors. All rights reserved.

关键词： Gamma rays

来源：评论

学校读者我要写书评

暂无评论

The chemical evolution of the solar neighbourhood for planet-hosting stars

arXiv

引用

arXiv 2023年

作者： Pignatari, Marco Trueman, Thomas C.L. Womack, Kate A. Gibson, Brad K. Côté, Benoit Turrini, Diego Sneden, Christopher Mojzsis, Stephen J. Stancliffe, Richard J. Fong, Paul Lawson, Thomas V. Keegans, James D. Pilkington, Kate Passy, Jean-Claude Beers, Timothy C. Lugaro, Maria ELKH Konkoly Thege M. út 15–17 BudapestH-1121 Hungary CSFK MTA Centre of Excellence Konkoly Thege Miklós út 15-17. BudapestH-1121 Hungary E. A. Milne Centre for Astrophysics Department of Physics and Mathematics University of Hull HU6 7RX United Kingdom INAF - Turin Astrophysical Observatory Via Osservatorio 20 Pino Torinese10025 Italy INAF - Institute of Space Astrophysics and Planetology Via Fosso del Cavaliere 100 Rome00133 Italy ICSC National Research Centre for High Performance Computing Big Data and Quantum Computing Via Magnanelli 2 Casalecchio di Reno40033 Italy Department of Astronomy and McDonald Observatory The University of Texas AustinTX78712 United States NuGrid Collaboration Joint Institute for Nuclear Astrophysics Center for the Evolution of the Elements United States Department of Physics and Astronomy University of Victoria VictoriaBCV8P 5C2 Canada Pázmány Péter sétány 1/c BudapestH-1117 Hungary H.H. Wills Physics Laboratory University of Bristol Tyndall Avenue BristolBS8 1TL United Kingdom Centre of Excellence for Data Science Artificial Intelligence and Modelling University of Hull HU6 7RX United Kingdom Astrophysics Group Lennard-Jones Laboratories Keele University KeeleST5 5BG United Kingdom School of Physical Sciences The Open University Milton KeynesMK7 6AA United Kingdom Max Planck Institute for Intelligent Systems Tübingen Germany Department of Physics and Astronomy University of Notre Dame Notre DameIN46556 United States ELTE Eötvös Loránd University Institute of Physics Pázmány Péter sétány 1/A Budapest1117 Hungary School of Physics and Astronomy Monash University VIC3800 Australia

Theoretical physical-chemical models for the formation of planetary systems depend on data quality for the Sun’s composition, that of stars in the solar neighbourhood, and of the estimated "pristine" compositions for stellar systems. The effective scatter and the observational uncertainties of elements within a few hundred parsecs from the Sun, even for the most abundant metals like carbon, oxygen and silicon, are still controversial. Here we analyse the stellar production and the chemical evolution of key elements that underpin the formation of rocky (C, O, Mg, Si) and gas/ice giant planets (C, N, O, S). We calculate 198 galactic chemical evolution (GCE) models of the solar neighbourhood to analyse the impact of different sets of stellar yields, of the upper mass limit for massive stars contributing to GCE (Mup) and of supernovae from massive-star progenitors which do not eject the bulk of the iron-peak elements (faint supernovae). Even considering the GCE variation produced via different sets of stellar yields, the observed dispersion of elements reported for stars in the Milky Way disk is not reproduced. Among others, the observed range of super-solar [Mg/Si] ratios, sub-solar [S/N], and the dispersion of up to 0.5 dex for [S/Si] challenge our models. The impact of varying Mup depends on the adopted supernova yields. Thus, observations do not provide a constraint on the Mup parametrization. When including the impact of faint supernova models in GCE calculations, elemental ratios vary by up to 0.1-0.2 dex in the Milky Way disk;this modification better reproduces observations. Copyright © 2023, The Authors. All rights reserved.

关键词： Dispersions

来源：评论

学校读者我要写书评

暂无评论

Petri Net Control Method for Pipe-line Systems and Its Implementation via CIF3 ⁎

引用

IFAC-PapersOnLine 2019年第24期52卷 261-266页

作者： YuHao Fu JiLiang Luo Huifeng Wu Jianhong Ye Yi-sheng Huang College Information Science and Engineering Huaqiao University Xiamen 361021 China College Information Science and Engineering Huaqiao University Xiamen 361021 China and also with Fujian Engineering Research Center of Motor Control and System Optimal Schedule Xiamen 361021 China Institute of Intelligent and Software Technology Hangzhou Dianzi University Hangzhou 310018 China Computer Science and Technology Huaqiao University Xiamen 361021 China and also with Fujian Provincial Key Laboratory of Data Intensive Computing Quanzhou 362000 China Department of Electrical Engineering National Ilan University Taiwan

As for a pipe-line system subjected to complex operations, an approach is proposed to synthesize the controller via Petri nets (PNs) such that the plant is run as concurrently as possible and the loads of equipments are balanced. A P-timed and labeled PN is designed to model the whole process of a pipe-line system, where tasks, including transporting material from one tank to another and cleaning tank, are represented by operational places, and level sensors amounted in tanks are represented by labels assigned to transitions. Further, monitor places are designed to resolve the conflict relations among tasks due to the shared valves and pipes. An method is presented to translate an PN controller into a CIF3 (Compositional Interchange Format) model, which can be converted into a PLC program in the CIF3 tool. A beer filtration plant is taken as an example to illustrate the approach, and its simulation experiments are carried out to verify the theoretic results.

关键词： Chemical plant Valve control Petri net CIF3

来源：评论

学校读者我要写书评

暂无评论

Multi-Thread Concurrent Compression Algorithm for Genomic Big data

Multi-Thread Concurrent Compression Algorithm for Genomic Bi...

引用

IEEE International Conference on Parallel and Distributed computing, Applications and Technologies (PDCAT)

作者： Yimu Ji Shuai Chen Haichang Yao Houzhi Fang Kui Li Shangdong Liu Zhengyuan Xie Kairui Wang School of Computer Science Nanjing University of Posts and Telecommunications Institute of High Performance Computing and Big Data Nanjing University of Posts and Telecommunications Nanjing Center of HPC China Jiangsu HPC and Intelligent Processing Engineer Research Center Nanjing China School of Computer Science Nanjing University of Posts and Telecommunications Nanjing China School of Computer Science Nanjing University of Posts and Telecommunications School of Computer and Software Nanjing Institute of Industry Technology Nanjing China University of Toronto Toronto Canada BSc Mathematics with Finance University of Liverpool Liverpool United Kingdom

ISBN: (数字)9781728126166

ISBN: (纸本)9781728126173

At present, there are many excellent genome compression algorithms with high genome compression ratio. However, there is a lack of highly efficient compression algorithms for simultaneous compression of a large number of genomes. This manuscript presents an algorithm, which is called FastLNGC, for simultaneous compression of a large amount of genome data based on multi-thread concurrency. This algorithm is based on the LNGC (Large Number of Genomes Compressor) algorithm, and adopts multi-thread technology to achieve concurrent processing of genome data compression. A large number of experiments show that FastLNGC has better performance on compression of a large number of genes. The source code of FastLNGC is available at https://***/APandaThief/FastLNGC.

关键词： Bioinformatics Genomics Compression algorithms Instruction sets Telecommunications Computer science Concurrent computing

来源：评论

学校读者我要写书评

暂无评论

Harmonized-Multinational qEEG norms (HarMNqEEG)

引用

NEUROIMAGE 2022年 256卷 119190-119190页

作者： Li, Min Wang, Ying Lopez-Naranjo, Carlos Hu, Shiang Reyes, Ronaldo Cesar Garcia Paz-Linares, Deirel Areces-Gonzalez, Ariosky Hamid, Aini Ismafairus Abd Evans, Alan C. Savostyanov, Alexander N. Calzada-Reyes, Ana Villringer, Arno Tobon-Quintero, Carlos A. Garcia-Agustin, Daysi Yao, Dezhong Dong, Li Aubert-Vazquez, Eduardo Reza, Faruque Razzaq, Fuleah Abdul Omar, Hazim Abdullah, Jafri Malin Galler, Janina R. Ochoa-Gomez, John F. Prichep, Leslie S. Galan-Garcia, Lidice Morales-Chacon, Lilia Valdes-Sosa, Mitchell J. Trondle, Marius Zulkifly, Mohd Faizal Mohd Rahman, Muhammad Riddha Bin Abdul Milakhina, Natalya S. Langer, Nicolas Rudych, Pavel Koenig, Thomas Virues-Alba, Trinidad A. Lei, Xu Bringas-Vega, Maria L. Bosch-Bayard, Jorge F. Valdes-Sosa, Pedro Antonio [a]The Clinical Hospital of Chengdu Brain Science Institute MOE Key Lab for Neuroinformation School of Life Science and Technology University of Electronic Science and Technology of China Chengdu China [b]Cuban Center for Neurocience La Habana Cuba [c]McGill Centre for Integrative Neuroscience Ludmer Centre for Neuroinformatics and Mental Health Montreal Neurological Institute Canada [d]Department of Neurosciences School of Medical Sciences Universiti Sains Malaysia Universiti Sains Malaysia Health Campus Kota Bharu Kelantan 16150 Malaysia [e]Brain and Behaviour Cluster School of Medical Sciences Universiti Sains Malaysia Health Campus Kota Bharu Kelantan 16150 Malaysia [f]Hospital Universiti Sains Malaysia Universiti Sains Malaysia Health Campus Kota Bharu Kelantan 16150 Malaysia [g]Humanitarian Institute Novosibirsk State University Novosibirsk 630090 Russia [h]Laboratory of Psychophysiology of Individual Differences Federal State Budgetary Scientific Institution Scientific Research Institute of Neurosciences and Medicine Novosibirsk 630117 Russia [i]Laboratory of Psychological Genetics at the Institute of Cytology and Genetics Siberian Branch of the Russian Academy of Sciences Novosibirsk 630090 Russia [j]University of Pinar del Río “Hermanos Saiz Montes de Oca” Pinar del Río Cuba [k]Department of Neurology Max Planck Institute for Human Cognitive and Brain Sciences Leipzig Germany [l]Department of Cognitive Neurology University Hospital Leipzig Leipzig Germany [m]Center for Stroke Research Charité-Universitätsmedizin Berlin Berlin Germany [n]Grupo Neuropsicología y Conducta - GRUNECO Faculty of Medicine Universidad de Antioquia Colombia [o]Research Department Institución Prestadora de Servicios de Salud IPS Universitaria Colombia [p]The Cuban center aging longevity and health Havana Cuba [q]Research Unit of NeuroInformation Chinese Academy of Medical Sciences Chengdu 2019RU035 China [r]School of Electrical Engineering Zhengzhou University Zhengzhou 4500

This paper extends frequency domain quantitative electroencephalography (qEEG) methods pursuing higher sensitivity to detect Brain Developmental Disorders. Prior qEEG work lacked integration of cross-spectral information omitting important functional connectivity descriptors. Lack of geographical diversity precluded accounting for site-specific variance, increasing qEEG nuisance variance. We ameliorate these weaknesses. (i) Create lifespan Riemannian multinational qEEG norms for cross-spectral tensors. These norms result from the HarMNqEEG project fostered by the Global Brain Consortium. We calculate the norms with data from 9 countries, 12 devices, and 14 studies, including 1564 subjects. Instead of raw data, only anonymized metadata and EEG cross spectral tensors were shared. After visual and automatic quality control, developmental equations for the mean and standard deviation of qEEG traditional and Riemannian DPs were calculated using additive mixed-effects models. We demonstrate qEEG "batch effects " and provide methods to calculate harmonized z-scores. (ii) We also show that harmonized Riemannian norms produce z-scores with increased diagnostic accuracy predicting brain dysfunction produced by malnutrition in the first year of life and detecting COVID induced brain dysfunction. (iii) We offer open code and data to calculate different individual z-scores from the HarMNqEEG dataset. These results contribute to developing bias-free, low-cost neuroimaging technologies applicable in various health settings.

关键词： Quantitative EEG EEG cross-spectrum Riemannian geometry Batch effects Z-score Harmonization Malnutrition Covid induced brain dysfunction Developmental Brain Chart

来源：评论

学校读者我要写书评

暂无评论

From FAIR to CURE: Guidelines for Computational Models of Biological Systems

arXiv

引用

arXiv 2025年

作者： Sauro, Herbert M. Agmon, Eran Blinov, Michael L. Gennari, John H. Hellerstein, Joe Heydarabadipour, Adel Hunter, Peter Jardine, Bartholomew E. May, Elebeoba Nickerson, David P. Smith, Lucian P. Bader, Gary D. Bergmann, Frank Boyle, Patrick M. Dräger, Andreas Faeder, James R. Feng, Song Freire, Juliana Fröhlich, Fabian Glazier, James A. Gorochowski, Thomas E. Helikar, Tomas Hoops, Stefan Imoukhuede, Princess Keating, Sarah M. Konig, Matthias Laubenbacher, Reinhard Loew, Leslie M. Lopez, Carlos F. Lytton, William W. McCulloch, Andrew Mendes, Pedro Myers, Chris J. Myers, Jerry G. Mulugeta, Lealem Niarakis, Anna van Niekerk, David D. Olivier, Brett G. Patrie, Alexander A. Quardokus, Ellen M. Radde, Nicole Rohwer, Johann M. Sahle, Sven Schaff, James C. Sego, T.J. Shin, Janis Snoep, Jacky L. Vadigepalli, Rajanikanth Wiley, H. Steve Waltemath, Dagmar Moraru, Ion Department of Bioengineering University of Washington SeattleWA98195-5061 United States Intelligent Systems Engineering and Biocomplexity Institute Indiana University Street BloomingtonIN47408 United States Center for Cardiovascular Biology University of Washington SeattleWA98195-5061 United States eScience Institute University of Washington SeattleWA98195-5061 United States Institute for Stem Cell and Regenerative Medicine University of Washington SeattleWA98195-5061 United States School of Biological Sciences University of Bristol 24 Tyndall Avenue BristolBS8 1TQ United Kingdom Departments of Physiology & Pharmacology Neurology Downstate Health Science University BrooklynNY11203 United States Department of Neurology Kings County Hospital BrooklynNY11203 United States NASA-John H. Glenn Research Center MS 110-3 21000 Brookpark Road ClevelandOH44135 United States Center for Cell Analysis and Modeling UConn Health 263 Farmington Avenue FarmingtonCT06030-6406 United States Amsterdam Institute for Life and Environment Vrije Universiteit Amsterdam De Boelelaan 1108 Amsterdam1081 HZ Netherlands Department of Pathology and Genomic Medicine Thomas Jefferson University 1020 Locust St PhiladelphiaPA19107 United States Biological Sciences Division Pacific Northwest National Laboratory 902 Battelle Blvd RichlandWA99354 United States Auckland Bioengineering Institute University of Auckland Auckland1010 New Zealand Center of Integrative Biology University of Toulouse III-Paul Sabatier 165 Rue Marianne Grunberg-Manago Toulouse31400 France Lifeware Group Inria Building Alan Turing 1 Rue Honoré d’Estienne d’Orves Palaiseau91120 France Multiscale Modeling Group Altos Labs Redwood CityCA94065 United States partner site Tübingen Tübingen Germany Ottfried-Müller-Str. 37 Tübingen72076 Germany 06120 Germany Department of Computer Science Center for Data Science New York University New YorkNY11201 United States Department of Bi

Guidelines for managing scientific data have been established under the FAIR principles requiring that data be Findable, Accessible, Interoperable, and Reusable. In many scientific disciplines, especially computational biology, both data and models are key to progress. For this reason, and recognizing that such models are a very special type of "data", we argue that computational models, especially mechanistic models prevalent in medicine, physiology and systems biology, deserve a complementary set of guidelines. We propose the CURE principles, emphasizing that models should be Credible, Understandable, Reproducible, and Extensible. We delve into each principle, discussing verification, validation, and uncertainty quantification for model credibility;the clarity of model descriptions and annotations for understandability;adherence to standards and open science practices for reproducibility;and the use of open standards and modular code for extensibility and reuse. We outline recommended and baseline requirements for each aspect of CURE, aiming to enhance the impact and trustworthiness of computational models, particularly in biomedical applications where credibility is paramount. Our perspective underscores the need for a more disciplined approach to modeling, aligning with emerging trends such as Digital Twins and emphasizing the importance of data and modeling standards for interoperability and reuse. Finally, we emphasize that given the non-trivial effort required to implement the guidelines, the community moves to automate as many of the guidelines as possible. © 2025, CC BY.

关键词：

来源：评论

学校读者我要写书评

暂无评论

建议与咨询留下您的常用邮箱和电话号码，以便我们向您反馈解决方案和替代方法

时间限定

文献类型

馆藏选择

核心期刊

语言

文献类型

帮助

文字说明：

检索规则说明：

检索范例：

分类表

所选分类

限定检索结果

文献类型

馆藏范围

日期分布

学科分类号

主题

机构

作者

语言

请选择保存的检索档案：

请选择收藏分类：

通借通还

建议与咨询 留下您的常用邮箱和电话号码，以便我们向您反馈解决方案和替代方法

时间限定

文献类型

馆藏选择

核心期刊

语言

文献类型

帮助

文字说明：

检索规则说明：

检索范例：

分类表

所选分类

限定检索结果

文献类型

馆藏范围

日期分布

学科分类号

主题

机构

作者

语言

请选择保存的检索档案： 新增检索档案 确定 取消

请选择收藏分类： 新增自定义分类 确定 取消

通借通还

建议与咨询留下您的常用邮箱和电话号码，以便我们向您反馈解决方案和替代方法

请选择保存的检索档案：

请选择收藏分类：