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Automatic Segmentation and Alignment of Uterine Shapes from 3D Ultrasound Data

computers in Biology and Medicine 2024年 178卷 108794-108794页

作者： Boneš, Eva Gergolet, Marco Bohak, Ciril Lesar, Žiga Marolt, Matija University of Ljubljana Faculty of Computer and Information Science Večna pot 113 Ljubljana1000 Slovenia University of Ljubljana Faculty of Medicine Vrazov trg 2 Ljubljana1000 Slovenia King Abdullah University of Science and Technology Visual Computing Center Thuwal23955-6900 Saudi Arabia

Background: The uterus is the most important organ in the female reproductive system. Its shape plays a critical role in fertility and pregnancy outcomes. Advances in medical imaging, such as 3D ultrasound, have significantly improved the exploration of the female genital tract, thereby enhancing gynecological healthcare. Despite well-documented data for organs like the liver and heart, large-scale studies on the uterus are lacking. Existing classifications, such as VCUAM and ESHRE/ESGE, provide different definitions for normal uterine shapes but are not based on real-world measurements. Moreover, the lack of comprehensive datasets significantly hinders research in this area. Our research, part of the larger NURSE study, aims to fill this gap by establishing the shape of a normal uterus using real-world 3D vaginal ultrasound scans. This will facilitate research into uterine shape abnormalities associated with infertility and recurrent miscarriages. Methods: We developed an automated system for the segmentation and alignment of uterine shapes from 3D ultrasound data, which consists of two steps: automatic segmentation of the uteri in 3D ultrasound scans using deep learning techniques, and alignment of the resulting shapes with standard geometrical approaches, enabling the extraction of the normal shape for future analysis. The system was trained and validated on a comprehensive dataset of 3D ultrasound images from multiple medical centers. Its performance was evaluated by comparing the automated results with manual annotations provided by expert clinicians. Results: The presented approach demonstrated high accuracy in segmenting and aligning uterine shapes from 3D ultrasound data. The segmentation achieved an average Dice similarity coefficient (DSC) of 0.90. Our method for aligning uterine shapes showed minimal translation and rotation errors compared to traditional methods, with the preliminary average shape exhibiting characteristics consistent with expert finding

关键词： Alignment

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TraceStream: Anomalous Service Localization based on Trace Stream Clustering with Online Feedback

TraceStream: Anomalous Service Localization based on Trace S...

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International Symposium on Software Reliability Engineering (ISSRE)

作者： Tong Zhou Chenxi Zhang Xin Peng Zhenghui Yan Pairui Li Jianming Liang Haibing Zheng Wujie Zheng Yuetang Deng School of Computer Science Fudan University China Shanghai Key Laboratory of Data Science Fudan University China Shanghai Collaborative Innovation Center of Intelligent Visual Computing China Tencent Inc. China

Modern large-scale service-based systems such as microservice systems have become increasingly complex, making it hard to localize anomalous services when various issues emerge. Traces record the workflows of requests through service instances and have been widely used in anomaly detection and root cause analysis. Existing trace-based approaches widely use statistical methods or learning-based techniques to detect trace anomalies and localize anomalous services. However, these approaches often suffer from the concept drift problem, i.e., the statistical properties of traces change over time in unforeseen ways. In this paper, we propose TraceStream, an anomalous service localization approach based on trace data stream clustering. TraceStream uses data stream clustering to discover potential anomalous trace clusters in evolving trace data and uses spectrum analysis to localize anomalous services based on the clusters. Moreover, TraceStream can effectively incorporate the online feedback of operation engineers based on the trace clusters to improve the accuracy for localizing anomalous services. Our evaluation confirms that TraceStream can effectively detect anomalies and localize anomalous services in an evolving microservice system. It can effectively incorporate human feedback to further improve the performance of anomalous service localization. Moreover, TraceStream is efficient and its efficiency can be further improved by sampling a small portion of traces by cluster.

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Learning Photometric Feature Transform for Free-Form Object Scan

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IEEE Transactions on visualization and computer Graphics 2024年 PP卷 PP页

作者： Feng, Xiang Kang, Kaizhang Pei, Fan Ding, Huakeng You, Jinjiang Tan, Ping Zhou, Kun Wu, Hongzhi Zhejiang University State Key Lab of CAD & CG Hangzhou310058 China King Abdullah University of Science and Technology Visual Computing Center Thuwal23955-6900 Saudi Arabia The Hong Kong University of Science and Technology Department of Electronic and Computer Engineering SAR Hong Kong Hong Kong

We propose a novel framework to automatically learn to aggregate and transform photometric measurements from multiple unstructured views into spatially distinctive and view-invariant low-level features, which are subsequently fed to a multi-view stereo pipeline to enhance 3D reconstruction. The illumination conditions during acquisition and the feature transform are jointly trained on a large amount of synthetic data. We further build a system to reconstruct both the geometry and anisotropic reflectance of a variety of challenging objects from hand-held scans. The effectiveness of the system is demonstrated with a lightweight prototype, consisting of a camera and an array of LEDs, as well as an off-the-shelf tablet. Our results are validated against reconstructions from a professional 3D scanner and photographs, and compare favorably with state-of-the-art techniques. © 1995-2012 IEEE.

关键词： Photometry

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GenRec: Unifying Video Generation and Recognition with Diffusion Models

arXiv

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arXiv 2024年

作者： Weng, Zejia Yang, Xitong Xing, Zhen Wu, Zuxuan Jiang, Yu-Gang Shanghai Key Lab of Intell. Info. Processing School of CS Fudan University China Shanghai Collaborative Innovation Center of Intelligent Visual Computing China Department of Computer Science University of Maryland United States

Video diffusion models are able to generate high-quality videos by learning strong spatial-temporal priors on large-scale datasets. In this paper, we aim to investigate whether such priors derived from a generative process are suitable for video recognition, and eventually joint optimization of generation and recognition. Building upon Stable Video Diffusion, we introduce GenRec, the first unified framework trained with a random-frame conditioning process so as to learn generalized spatial-temporal representations. The resulting framework can naturally supports generation and recognition, and more importantly is robust even when visual inputs contain limited information. Extensive experiments demonstrate the efficacy of GenRec for both recognition and generation. In particular, GenRec achieves competitive recognition performance, offering 75.8% and 87.2% accuracy on SSV2 and K400, respectively. GenRec also performs the best on class-conditioned image-to-video generation, achieving 46.5 and 49.3 FVD scores on SSV2 and EK-100 datasets. Furthermore, GenRec demonstrates extraordinary robustness in scenarios that only limited frames can be observed. Code will be available at https://***/wengzejia1/GenRec. Copyright © 2024, The Authors. All rights reserved.

关键词： Spatio-temporal data

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SPTNET: Span-based Prompt Tuning for Video Grounding

SPTNET: Span-based Prompt Tuning for Video Grounding

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IEEE International Conference on Multimedia and Expo (ICME)

作者： Yiren Zhang Yuanwu Xu Mohan Chen Yuejie Zhang Rui Feng Shang Gao School of Computer Science Shanghai Key Laboratory of Intelligent Information Processing Shanghai Collaborative Innovation Center of Intelligent Visual Computing Fudan University School of Information Technology Deakin University

When a Pre-trained Language Model (PLM) is adopted in video grounding task, it usually acts as a text encoder without having its knowledge fully utilized. Also, there exists an inconsistency problem between the pre-training and downstream objectives. To solve the issues, we propose a new paradigm, named Span-based Prompt Tuning (SPTNet). It can convert the video grounding task into a cloze form. Specifically, a query is first changed into a form with mask token by a template, then the video and the query embeddings are integrated through a cross-modal transformer. The start and end points of the query matching time span are predicted with the embedding of the mask token. Experimental results on two public benchmarks ActivityNet Captions and Charades-STA show that our SPTNet achieves surpassing performance compared with state-of-the-art methods.

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Conditional Video-Text Reconstruction Network with Cauchy Mask for Weakly Supervised Temporal Sentence Grounding

Conditional Video-Text Reconstruction Network with Cauchy Ma...

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IEEE International Conference on Multimedia and Expo (ICME)

作者： Jueqi Wei Yuanwu Xu Mohan Chen Yuejie Zhang Rui Feng Shang Gao School of Computer Science Shanghai Key Laboratory of Intelligent Information Processing Shanghai Collaborative Innovation Center of Intelligent Visual Computing Fudan University School of Information Technology Deakin University

Temporal sentence grounding aims to detect the target segment most related to a given query in an untrimmed video. To alleviate the expensive annotation cost for temporal labels, researchers paid more attention to weakly supervised setting. Prior studies neglected the utilization of video representation reconstruction, which led to an unbalanced alignment learning. Moreover, they used different strategies to generate proposals which ignored the temporal structure in a query. In this paper, we propose a novel Conditional Video-Text Reconstruction Network (CVTRN). It supports conditional reconstruction of video and text representation. Specifically, video and text features are fused to compute semantic alignment, which is the condition of reconstruction. A new mask strategy for mask conditioned sentence reconstruction is also devised. This strategy focuses more on boundary regions than the widely used Gaussian mask in previous methods. Experimental results on two public benchmark datasets show that our CVTRN outperforms the state-of-the-art methods.

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3D Human Mesh Estimation from Virtual Markers

3D Human Mesh Estimation from Virtual Markers

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Conference on computer Vision and Pattern Recognition (CVPR)

作者： Xiaoxuan Ma Jiajun Su Chunyu Wang Wentao Zhu Yizhou Wang School of Computer Science Center on Frontiers of Computing Studies Peking University Microsoft Research Asia Inst. for Artificial Intelligence Peking University Nat'l Eng. Research Center of Visual Technology

Inspired by the success of volumetric 3D pose estimation, some recent human mesh estimators propose to estimate 3D skeletons as intermediate representations, from which, the dense 3D meshes are regressed by exploiting the mesh topology. However, body shape information is lost in extracting skeletons, leading to mediocre performance. The advanced motion capture systems solve the problem by placing dense physical markers on the body surface, which allows to extract realistic meshes from their non-rigid motions. However, they cannot be applied to wild images without markers. In this work, we present an intermediate representation, named virtual markers, which learns 64 landmark keypoints on the body surface based on the large-scale mocap data in a generative style, mimicking the effects of physical markers. The virtual markers can be accurately detected from wild images and can reconstruct the intact meshes with realistic shapes by simple interpolation. Our approach outperforms the state-of-the-art methods on three datasets. In particular, it surpasses the existing methods by a notable margin on the SURREAL dataset, which has diverse body shapes. Code is available at https://***/ShirleyMaxx/VirtualMarker

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Meta-Transfer Learning Based Cross-Domain Gesture Recognition Using WiFi Channel State Information

引用

IEEE Transactions on Consumer Electronics 2025年

作者： Dai, Penglin Zhou, Junfei Ma, Jialong Zhang, Hao Wu, Xiao Southwest Jiaotong University School of Computing and Artificial Intelligence Chengdu611756 China Ministry of Education Engineering Research Center of Sustainable Urban Intelligent Transportation China Tangshan Institute of Southwest Jiaotong University Tangshan063000 China Chongqing University of Posts and Telecommunications College of Computer Science and Technology Key Laboratory of Data Engineering and Visual Computing Chongqing400065 China

Gesture recognition plays a crucial role in a wide range of consumer electronics applications, including human-computer interaction and virtual reality, by enabling the identification and interpretation of human gestures. In recent times, WiFi-based gesture recognition has garnered significant attention due to its privacy protection and unobtrusive nature. However, this approach heavily depends on neural network-based models and is notably influenced by environmental conditions, such as specific location and orientation. To address these environmental impacts, we propose a network framework that leverages transfer learning and meta-learning. The primary focus is on utilizing transfer learning to train a convolutional neural network (ResNet) for feature extraction, enabling the extraction of domain-independent features specifically related to gestures, rather than being influenced by environmental factors. Additionally, we employ the meta-learning algorithm MAML to train the fully connected network for gesture classification. Following training, a small set of samples can be utilized for rapid adaptation to diverse domains, maintaining high accuracy across different domains to achieve cross-domain gesture recognition. Our performance evaluation is based on the Widar 3.0 dataset, encompassing both in-domain and cross-domain scenarios. The simulation results demonstrate that our proposed algorithm surpasses Widar3.0 and WiGRUNT by approximately 7.9% and 1.12% in gesture recognition accuracy across all scenarios. © 2025 IEEE.

关键词： Wi-Fi

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Open-VCLIP: Transforming CLIP to an Open-vocabulary Video Model via Interpolated Weight Optimization

arXiv

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arXiv 2023年

作者： Weng, Zejia Yang, Xitong Li, Ang Wu, Zuxuan Jiang, Yu-Gang Shanghai Key Laboratory of Intelligent Information Processing School of Computer Science Fudan University China Shanghai Collaborative Innovation Center of Intelligent Visual Computing China Meta AI United States

Contrastive Language-Image Pretraining (CLIP) has demonstrated impressive zero-shot learning abilities for image understanding, yet limited effort has been made to investigate CLIP for zero-shot video recognition. We introduce Open-VCLIP, a simple yet effective approach that transforms CLIP into a strong zero-shot video classifier that can recognize unseen actions and events at test time. Our framework extends CLIP with minimal modifications to model spatial-temporal relationships in videos, making it a specialized video classifier, while striving for generalization. We formally show that training an Open-VCLIP is equivalent to continual learning with zero historical data. To address this problem, we propose Interpolated Weight Optimization, which utilizes the benefit of weight interpolation in both training and test time. We evaluate our method on three popular and challenging action recognition datasets following various zero-shot evaluation protocols and we demonstrate our approach outperforms state-of-the-art methods by clear margins. In particular, we achieve 87.9%, 58.3%, 81.1% zero-shot accuracy on UCF, HMDB and Kinetics-600 respectively, outperforming state-of-the-art methods by 8.3%, 7.8% and 12.2%. Code is released at https://***/wengzejia1/Open-VCLIP. Copyright © 2023, The Authors. All rights reserved.

关键词： Zero-shot learning

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MOSMOS: Multi-organ segmentation facilitated by medical report supervision

arXiv

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arXiv 2024年

作者： Tian, Weiwei Huang, Xinyu Hou, Junlin Ren, Caiyue Jiang, Longquan Zhao, Rui-Wei Jin, Gang Zhang, Yuejie Geng, Daoying Academy for Engineering and Technology Fudan University Shanghai200433 China School of Computer Science Shanghai Key Laboratory of Intelligent Information Processing Fudan University Shanghai200433 China Shanghai Collaborative Innovation Center of Intelligent Visual Computing China Shanghai200433 China Department of Computer Science and Engineering The Hong Kong University of Science and Technology China

Owing to a large amount of multi-modal data in modern medical systems, such as medical images and reports, Medical Vision-Language Pre-training (Med-VLP) has demonstrated incredible achievements in coarse-grained downstream tasks (i.e., medical classification, retrieval, and visual question answering). However, the problem of transferring knowledge learned from Med-VLP to fine-grained multi-organ segmentation tasks has barely been investigated. Multi-organ segmentation is challenging mainly due to the lack of large-scale fully annotated datasets and the wide variation in the shape and size of the same organ between individuals with different diseases. In this paper, we propose a novel pre-training & fine-tuning framework for Multi-Organ Segmentation by harnessing Medical repOrt Supervision (MOSMOS). Specifically, we first introduce global contrastive learning to maximally align the medical image-report pairs in the pre-training stage. To remedy the granularity discrepancy, we further leverage multi-label recognition to implicitly learn the semantic correspondence between image pixels and organ tags. More importantly, our pre-trained models can be transferred to any segmentation model by introducing the pixel-tag attention maps. Different network settings, i.e., 2D U-Net and 3D UNETR, are utilized to validate the generalization. We have extensively evaluated our approach using different diseases and modalities on BTCV, AMOS, MMWHS, and BRATS datasets. Experimental results in various settings demonstrate the effectiveness of our framework. This framework can serve as the foundation to facilitate future research on automatic annotation tasks under the supervision of medical reports. Copyright © 2024, The Authors. All rights reserved.

关键词： Semantics

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