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Active interactions between animals and technology: biohybrid approaches for animal behaviour research

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Animal Behaviour 2025年 224卷

作者： Papadopoulou, M. Ball, M. Bartashevich, P. Burns, A.L.J. Chiara, V. Clark, M.A. Costelloe, B.R. Fele, M. French, F. Hauert, S. Heinrich, M.K. Herbert-Read, J.E. Hoitt, J. Ioannou, C.C. Landgraf, T. Matchette, S.R. Polverino, G. Sankey, D.W.E. Scott, D.M. Sridhar, V.H. Strömbom, D. Trianni, V. Vo-Doan, T.T. King, A.J. Department of Biosciences Faculty of Science and Engineering Swansea University Swansea United Kingdom Department of Biology Lafayette College Easton PA United States Institute for Theoretical Biology Department of Biology Humboldt-Universität zu Berlin Berlin Germany Cluster of Excellence ‘Science of Intelligence’ Berlin Germany Department Fish Biology Fisheries and Aquaculture Leibniz Institute of Freshwater Ecology and Inland Fisheries Berlin Germany Faculty of Life Sciences Albrecht Daniel Thaer-Institute of Agricultural and Horticultural Sciences Humboldt-Universität zu Berlin Berlin Germany Museum and Institute of Zoology Polish Academy of Science Warszawa Poland School of Biological Sciences University of Bristol Bristol United Kingdom School of Natural Sciences Macquarie University Sydney Australia Centre for the Advanced Study of Collective Behaviour University of Konstanz Konstanz Germany Department of Biology University of Konstanz Konstanz Germany Department of Collective Behavior Max Planck Institute of Animal Behavior Konstanz Germany School of Computing and Digital Media London Metropolitan University London United Kingdom Bristol Robotics Laboratory University of Bristol Bristol United Kingdom IRIDIA Université Libre de Bruxelles Brussels Belgium Department of Zoology University of Cambridge Cambridge United Kingdom Department of Mathematics and Computer Science Freie Universität Berlin Berlin Germany Department of Ecological and Biological Sciences University of Tuscia Viterbo Italy School of Natural and Environmental Science Newcastle University Newcastle upon Tyne United Kingdom Centre for Ecology and Conservation Faculty of Environment Science and Economy University of Exeter Penryn Campus Cornwall United Kingdom School of Animal Rural and Environmental Sciences Nottingham Trent University Nottingham United Kingdom Department for the Ecology of Animal Societies Max Planck Institute of Animal Behavior Konstanz Germany Ins

Biohybrid approaches (where living and engineered components are combined) provide new opportunities for advancing animal behaviour research and its applications. This review article and accompanying special issue explores how different types of novel technologies can be used in the field of animal behaviour from three perspectives: (1) comprehension, (2) application and (3) integration. Under the perspective of ‘comprehension,’ we present examples of how technologies like virtual animals or robots can be used in experimental settings to interact with living animals in a standardized manner. Such interactions can advance our understanding of fundamental topics such as mate choice, social learning and collective behaviour. Under ‘application,’ we investigate the potential for technologies to monitor, react and interact with animals in a variety of scenarios. For example, we discuss how drones can be used to keep large herbivores away from valuable crops and robotic predators to deter invasive species. Under ‘integration,’ we discuss possibilities for the coexistence of engineered and biological systems, augmenting the capacity or resilience of either or both components. Integration can be physical, for example, livestock can have sensors sit in their inner body for temperature monitoring, or within the environment, where sensors or robots monitor and interact with animals, such as a short-term earthquake forecasting method. Based upon these three themes, we discuss and classify existing biohybrid animal behaviour research, including the four articles included in our special issue. We also consider the ethics of this emerging field, highlight the advantages and potential issues associated with using technologies to create biohybrid systems and emphasize how such technologies can support the advancement of animal behaviour research. © 2025 The Association for the Study of Animal Behaviour

关键词： behavioural control behavioural monitoring biomimetic robotics ethorobotics interspecies interaction sensory integration

POSTER: Layrub: Layer-centric GPU memory reuse and data migration in extreme-scale deep learning systems

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ACM SIGPLAN Notices 2018年第1期53卷 405-406页

作者： Liu, Bo Jiang, Wenbin Jin, Hai Shi, Xuanhua Ma, Yang Services Computing Technology and System Lab Cluster and Grid Computing Lab School of Computer Science and Technology Huazhong University of Science and Technology Wuhan430074 China

ISBN: (纸本)9781450349116

Growing accuracy and robustness of Deep Neural Networks (DNN) models are accompanied by growing model capacity (going deeper or wider). However, high memory requirements of those models make it difficult to execute the training process in one GPU. To address it, we first identify the memory usage characteristics for deep and wide convolutional networks, and demonstrate the opportunities of memory reuse on both intra-layer and inter-layer levels. We then present Layrub, a runtime data placement strategy that orchestrates the execution of training process. It achieves layer-centric reuse to reduce memory consumption for extreme-scale deep learning that cannot be run on one single GPU. © 2018 Owner/Author.

关键词： Deep neural networks

Saudi cloud infrastructure: a security analysis

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Science China(Information Sciences) 2017年第12期60卷 152-164页

作者： Wahid RAJEH Hai JIN Deqing ZOU Services Computing Technology and System Lab Big Data Technology and System LabCluster and Grid Computing Lab School of Computer Science and TechnologyHuazhong University of Science and Technology School of Computers and Information Technology University of Tabuk

The growing demand and dependence upon cloud services have garnered an increasing level of threat to user data and security. Some of such critical web and cloud platforms have become constant targets for persistent malicious attacks that attempt to breach security protocol and access user data and information in an unauthorized manner. While some of such security compromises may result from insider data and access leaks, a substantial proportion continues to remain attributed to security flaws that may exist within the core web technologies with which such critical infrastructure and services are developed. This paper explores the direct impact and significance of security in the Software Development Life Cycle(SDLC) through a case study that covers some 70 public domain web and cloud platforms within Saudi Arabia. Additionally, the major sources of security vulnerabilities within the target platforms as well as the major factors that drive and influence them are presented and discussed through experimental evaluation. The paper reports some of the core sources of security flaws within such critical infrastructure by implementation with automated security auditing and manual static code analysis. The work also proposes some effective approaches, both automated and manual, through which security can be ensured through-out the SDLC and safeguard user data integrity within the cloud.

关键词： cloud security vulnerability detection web security Saudi infrastructure cloud service

MalScan: Fast Market-Wide Mobile Malware Scanning by Social-Network Centrality Analysis

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MalScan: Fast Market-Wide Mobile Malware Scanning by Social-...

IEEE International Conference on Automated Software Engineering (ASE)

作者： Yueming Wu Xiaodi Li Deqing Zou Wei Yang Xin Zhang Hai Jin Cluster and Grid Computing Lab Services Computing Technology and System Lab National Engineering Research Center for Big Data Technology and System School of Cyber Science and Engineering Huazhong University of Science and Technology Wuhan China University of Texas at Dallas Shenzhen Huazhong University of Science and Technology Research Institute School of Computer Science and Technology Huazhong University of Science and Technology Wuhan China

Malware scanning of an app market is expected to be scalable and effective. However, existing approaches use either syntax-based features which can be evaded by transformation attacks or semantic-based features which are usually extracted by performing expensive program analysis. Therefor, in this paper, we propose a lightweight graph-based approach to perform Android malware detection. Instead of traditional heavyweight static analysis, we treat function call graphs of apps as social networks and perform social-network-based centrality analysis to represent the semantic features of the graphs. Our key insight is that centrality provides a succinct and fault-tolerant representation of graph semantics, especially for graphs with certain amount of inaccurate information (e.g., inaccurate call graphs). We implement a prototype system, MalScan, and evaluate it on datasets of 15,285 benign samples and 15,430 malicious samples. Experimental results show that MalScan is capable of detecting Android malware with up to 98% accuracy under one second which is more than 100 times faster than two state-of-the-art approaches, namely MaMaDroid and Drebin. We also demonstrate the feasibility of MalScan on market-wide malware scanning by performing a statistical study on over 3 million apps. Finally, in a corpus of dataset collected from Google-Play app market, MalScan is able to identify 18 zero-day malware including malware samples that can evade detection of existing tools.

关键词： Malware Social networking (online) Feature extraction Semantics Analysis of variance Static analysis Robustness

SDPMN: Privacy preserving MapReduce network using SDN

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arXiv 2018年

作者： Li, He Jin, Hai Services Computing Technology System Lab Cluster Grid Computing Lab School of Computer Science and Technology Huazhong University of Science and Technology Wuhan430074 China

MapReduce is a popular programming model and an associated implementation for parallel processing big data in the distributed environment. Since large scaled MapReduce data centers usually provide services to many users, it is an essential problem to preserve the privacy between different applications in the same network. In this paper, we propose SDPMN, a framework that using software defined network (SDN) to distinguish the network between each application, which is a manageable and scalable method. We design this framework based on the existing SDN structure and Hadoop networks. Since the rule space of each SDN device is limited, we also propose the rule placement optimization for this framework to maximize the hardware supported isolated application networks. We state this problem in a general MapReduce network and design a heuristic algorithm to find the solution. From the simulation based evaluation, with our algorithm, the given network can support more privacy preserving application networks with SDN switches. Copyright © 2018, The Authors. All rights reserved.

关键词： MapReduce

Echo: An Edge-Centric Code Offloading System with Quality of Service Guarantee

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arXiv 2018年

作者： Lin, Li Liao, Xiaofei Service Computing Technology and System Lab Cluster and Grid Computing Lab School of Computer Science and Technology Huazhong University of Science and Technology Wuhan430074 China

Code offloading is promising to accelerate mobile applications and save energy of mobile devices by shifting some computation to cloud. However, existing code offloading systems suffer from a long communication delay between mobile devices and cloud. To address this challenge, in this paper, we consider to deploy edge nodes in the proximity of mobile devices, and study how they benefit code offloading. We design an edge-centric code offloading system, called Echo, over a three-layer computing hierarchy consisting of mobile devices, edge and cloud. A critical problem needs to be addressed by Echo is to decide which method should be offloaded to which computing platform (edge or cloud). Different from existing offloading systems that let mobile devices individually make offloading decisions, Echo implements a centralized decision engine at the edge node. This edge-centric design can fully exploit the limited hardware resources at the edge to provide an offloading service with Quality of Service guarantee. Furthermore, we propose some novel mechanisms, e.g., lazy object transmission and differential object update, to further improve system performance. The results of a small-scale real deployment and trace-driven simulations show that Echo significantly outperforms existing code offloading systems at both execution time and energy consumption. Copyright © 2018, The Authors. All rights reserved.

关键词： Edge computing

A Quantum Secret Sharing Scheme Using Orbital Angular Momentum onto Multiple Spin States Based on Fibonacci Compression Encoding

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Communications in Theoretical Physics 2018年第10期70卷 384-390页

作者： Hong Lai Ming-Xing Luo Yong-Jian Xu Josef Pieprzyk Jun Zhang Lei Pan Mehmet A.Orgun School of Computer and Information Science and Centre for Research and Innovation in Software Engineering（RISE） Southwest UniversityChongqing 400715China Information Security and National Computing Grid Laboratory School of Information Science and TechnologySouthwest Jiaotong UniversityChengdu 610031China Data61 Commonwealth Scientific and Industrial Research OrganisationSydneyAustralia Institute of Computer Science Polish Academy of SciencesWarsaw01-248Poland School of Software and Electrical Engineering Swinburne University of TechnologyHawthornVIC3122Australia School of Information Technology Deakin UniversityGeelongVIC3220Australia Department of Computing Macquarie UniversitySydneyNSW 2109Australia Faculty of Information Technology Macao University of Science and TechnologyAvenida Wai LongTaipa999078Macao

Since the use of a quantum channel is very expensive for transmitting large messages, it is vital to develop an effective quantum compression encoding scheme that is easy to implement. Given that, with the single-photon spin-orbit entanglement, we propose a quantum secret sharing scheme using orbital angular momentum onto multiple spin states based on Fibonacci compression encoding. In our proposed scheme, we can represent the frequency of any secret message which is typically collection of bits encodings of text or integers as a bitstring using the base Fibonacci sequence, which is encoded multiple spin states for secret shares transmitted to participants. We demonstrate that Fibonacci compression encoding carries excellent properties that enable us to achieve more robust quantum secret sharing schemes with fewer number of photons.

关键词： spin-orbit entanglement multiple spin states Fibonacci compression encoding quantum secretsharing

Metrics Reloaded: Recommendations for image analysis validation

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arXiv 2022年

作者： Maier-Hein, Lena Reinke, Annika Godau, Patrick Tizabi, Minu D. Buettner, Florian Christodoulou, Evangelia Glocker, Ben Isensee, Fabian Kleesiek, Jens Kozubek, Michal Reyes, Mauricio Riegler, Michael A. Wiesenfarth, Manuel Emre Kavur, A. Sudre, Carole H. Baumgartner, Michael Eisenmann, Matthias Heckmann-Nötzel, Doreen Rädsch, Tim Acion, Laura Antonelli, Michela Arbel, Tal Bakas, Spyridon Benis, Arriel Blaschko, Matthew B. Jorge Cardoso, M. Cheplygina, Veronika Cimini, Beth A. Collins, Gary S. Farahani, Keyvan Ferrer, Luciana Galdran, Adrian Ginneken, Bram Van Haase, Robert Hashimoto, Daniel A. Hoffman, Michael M. Huisman, Merel Jannin, Pierre Kahn, Charles E. Kainmueller, Dagmar Kainz, Bernhard Karargyris, Alexandros Karthikesalingam, Alan Kenngott, Hannes Kofler, Florian Kopp-Schneider, Annette Kreshuk, Anna Kurc, Tahsin Landman, Bennett A. Litjens, Geert Madani, Amin Maier-Hein, Klaus Martel, Anne L. Mattson, Peter Meijering, Erik Menze, Bjoern Moons, Karel G.M. Müller, Henning Nichyporuk, Brennan Nickel, Felix Petersen, Jens Rajpoot, Nasir Rieke, Nicola Saez-Rodriguez, Julio Sánchez, Clara I. Shetty, Shravya Smeden, Maarten Van Summers, Ronald M. Taha, Abdel A. Tiulpin, Aleksei Tsaftaris, Sotirios A. Calster, Ben Van Varoquaux, Gaël Jäger, Paul F. Heidelberg Division of Intelligent Medical Systems and HI Helmholtz Imaging Germany Faculty of Mathematics and Computer Science and Medical Faculty Heidelberg University Heidelberg Germany NCT Heidelberg a partnership between DKFZ University Medical Center Heidelberg Germany Faculty of Mathematics and Computer Science Heidelberg University Heidelberg Germany Heidelberg Division of Intelligent Medical Systems Germany partner site Frankfurt/Mainz a partnership between DKFZ and UCT Frankfurt-Marburg Germany Heidelberg Goethe University Frankfurt Germany Department of Medicine Goethe University Frankfurt Germany Department of Informatics Frankfurt Cancer Insititute Germany Department of Computing Imperial College London London United Kingdom Heidelberg Division of Medical Image Computing and HI Applied Computer Vision Lab Germany Institute for AI in Medicine University Medicine Essen Essen Germany Centre for Biomedical Image Analysis Faculty of Informatics Masaryk University Brno Czech Republic ARTORG Center for Biomedical Engineering Research University of Bern Bern Switzerland Department of Radiation Oncology University Hospital Bern University of Bern Bern Switzerland Simula Metropolitan Center for Digital Engineering Oslo Norway UiT The Arctic University of Norway Romsø Norway Heidelberg Division of Biostatistics Germany Heidelberg Division of Intelligent Medical Systems Division of Medical Image Computing HI Applied Computer Vision Lab Germany MRC Unit for Lifelong Health and Ageing UCL Centre for Medical Image Computing Department of Computer Science University College London London United Kingdom School of Biomedical Engineering and Imaging Science King’s College London London United Kingdom Heidelberg Division of Medical Image Computing Germany Instituto de Cálculo CONICET – Universidad de Buenos Aires Buenos Aires Argentina Centre for Medical Image Computing University College London London United Kingdom McGill University Montréal

Increasing evidence shows that flaws in machine learning (ML) algorithm validation are an underestimated global problem. Particularly in automatic biomedical image analysis, chosen performance metrics often do not reflect the domain interest, thus failing to adequately measure scientific progress and hindering translation of ML techniques into practice. To overcome this, we created Metrics Reloaded, a comprehensive framework guiding researchers in the problem-aware selection of metrics. It was developed by a large international consortium in a multi-stage Delphi process and is based on the novel concept of a problem fingerprint – a structured representation of the given problem that captures all aspects that are relevant for metric selection, from the domain interest to the properties of the target structure(s), data set and algorithm output. Based on the problem fingerprint, users are guided through the process of choosing and applying appropriate validation metrics while being made aware of potential pitfalls. Metrics Reloaded targets image analysis problems that can be interpreted as a classification task at image, object or pixel level, namely image-level classification, object detection, semantic segmentation, and instance segmentation tasks. To improve the user experience, we implemented the framework in the Metrics Reloaded online tool. Following the convergence of ML methodology across application domains, Metrics Reloaded fosters the convergence of validation methodology. Its applicability is demonstrated for various biomedical use cases. © 2022, CC BY.

关键词： Semantic Segmentation

Efficient Time-Evolving Stream Processing at Scale

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arXiv 2018年

作者： Huang, Yu Services Computing Technology and System Lab Big Data Technology and System Lab Cluster and Grid Computing Lab School of Computer Science and Technology Huazhong University of Science and Technology Wuhan430074 China

—Time-evolving stream datasets exist ubiquitously in many real-world applications where their inherent hot keys often evolve over times. Nevertheless, few existing solutions can provide efficient load balance on these time-evolving datasets while preserving low memory overhead. In this paper, we present a novel grouping approach (named FISH), which can provide the efficient time-evolving stream processing at scale. The key insight of this work is that the keys of time-evolving stream data can have a skewed distribution within any bounded distance of time interval. This enables to accurately identify the recent hot keys for the real-time load balance within a bounded scope. We therefore propose an epoch-based recent hot key identification with specialized intra-epoch frequency counting (for maintaining low memory overhead) and inter-epoch hotness decaying (for suppressing superfluous computation). We also propose to heuristically infer the accurate information of remote workers through computation rather than communication for cost-efficient worker assignment. We have integrated our approach into Apache Storm. Our results on a cluster of 128 nodes for both synthetic and real-world stream datasets show that FISH significantly outperforms state-of-the-art with the average and the 99th percentile latency reduction by 87.12% and 76.34% (vs. W-Choices), and memory overhead reduction by 99.96% (vs. Shuffle Grouping). Copyright © 2018, The Authors. All rights reserved.

关键词： Fish