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arXiv 2022年

作者： Lou, Wei Li, Haofeng Li, Guanbin Han, Xiaoguang Wan, Xiang Shenzhen Research Institute of Big Data Guangdong Provincial Key Laboratory of Big Data Computing The Chinese University of Hong Kong at Shenzhen Shenzhen518172 China The School of Computer Science and Engineering Sun Yat-sen University Guangzhou510006 China Pazhou Lab Guangzhou510330 China

Recently deep neural networks, which require a large amount of annotated samples, have been widely applied in nuclei instance segmentation of H&E stained pathology images. However, it is inefficient and unnecessary to label all pixels for a dataset of nuclei images which usually contain similar and redundant patterns. Although unsupervised and semi-supervised learning methods have been studied for nuclei segmentation, very few works have delved into the selective labeling of samples to reduce the workload of annotation. Thus, in this paper, we propose a novel full nuclei segmentation framework that chooses only a few image patches to be annotated, augments the training set from the selected samples, and achieves nuclei segmentation in a semi-supervised manner. In the proposed framework, we first develop a novel consistency-based patch selection method to determine which image patches are the most beneficial to the training. Then we introduce a conditional single-image GAN with a component-wise discriminator, to synthesize more training samples. Lastly, our proposed framework trains an existing segmentation model with the above augmented samples. The experimental results show that our proposed method could obtain the same-level performance as a fully-supervised baseline by annotating less than 5% pixels on some benchmarks. Copyright © 2022, The Authors. All rights reserved.

关键词： Generative adversarial networks

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Classification of Breast Thermal Images into Healthy/Cancer Group Using Pre-Trained Deep Learning Schemes

Classification of Breast Thermal Images into Healthy/Cancer ...

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2022 International Conference on Machine Learning and data Engineering, ICMLDE 2022

作者： Kadry, Seifedine Crespo, Rubén González Herrera-Viedma, Enrique Krishnamoorthy, Sujatha Rajinikanth, Venkatesan Faculty of Applied Computing and Technology Noroff University College Kristiansand94612 Norway Computer Science Department School of Engineering and Technology Universidad Internacional de la Rioja Andalusia26006 Spain Research Institute in Data Science and Computational Intelligence University of Granada Granada Spain Zhejiang Bioinformatics International Science and Technology Cooperation Center Wenzhou-Kean University Zhejiang Province China Wenzhou Municipal Key Lab of Applied Biomedical and Biopharmaceutical Informatics Wenzhou-Kean University Zhejiang Province China Department of Computer Science and Engineering Saveetha School of Engineering SIMATS Tamil Nadu Chennai602105 India

In the women's community, Breast Cancer (BC) is a severe disease. The World Health Organization reported in 2020 that 2.26 million deaths occur due to BC. BC is curable if detected early. Since thermal imaging is non-invasive and supports disease detection, it is commonly used in clinics. Compared to other methods, it keeps BC early and accurate. The proposed work aims to evaluate the performance of the Pretrained Deep-Learning Methods (PDLM) in detecting BC using the thermal images collected from the benchmark dataset. It includes the following stages: primary image processing, deep feature mining, handcrafted feature mining, feature optimization using Firefly-Algorithm (FA), classification and validation. Visual lab thermal images were used in the study. The investigational outcome of this study authenticates that the VGG16, along with the DT, provides better detection accuracy (95.5%) compared to other classifiers used in this study. To justify the significance of the implemented technique, the proposed work not only improved accuracy, but also improved precision, sensitivity, specificity, and F1-Scores. © 2023 The Authors. Published by Elsevier B.V.

关键词： Classification (of information)

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INMO: A Model-Agnostic and Scalable Module for Inductive Collaborative Filtering

arXiv

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arXiv 2021年

作者： Wu, Yunfan Cao, Qi Shen, Huawei Tao, Shuchang Cheng, Xueqi Data Intelligence System Research Center Institute of Computing Technology CAS University of Chinese Academy of Sciences Beijing China Data Intelligence System Research Center Institute of Computing Technology CAS China CAS Key Lab of Network Data Science and Technology Institute of Computing Technology CAS University of Chinese Academy of Sciences Beijing China

Collaborative filtering is one of the most common scenarios and popular research topics in recommender systems. Among existing methods, latent factor models, i.e., learning a specific embedding for each user/item by reconstructing the observed interaction matrix, have shown excellent performances. However, such user-specific and item-specific embeddings are intrinsically transductive, making it difficult to deal with new users and new items unseen during training. Besides, the number of model parameters heavily depends on the number of all users and items, restricting its scalability to real-world applications. To solve the above challenges, in this paper, we propose a novel model-agnostic and scalable Inductive Embedding Module for collaborative filtering, namely INMO. INMO generates the inductive embeddings for users (items) by characterizing their interactions with some template items (template users), instead of employing an embedding lookup table. Under the theoretical analysis, we further propose an effective indicator for the selection of template users/items. Our proposed INMO can be attached to existing latent factor models as a pre-module, inheriting the expressiveness of backbone models, while bringing the inductive ability and reducing model parameters. We validate the generality of INMO by attaching it to both Matrix Factorization (MF) and LightGCN, which are two representative latent factor models for collaborative filtering. Extensive experiments on three public benchmarks demonstrate the effectiveness and efficiency of INMO in both transductive and inductive recommendation scenarios. © 2021, CC BY.

关键词： Recommender systems

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JARVIS-Leaderboard:a large scale benchmark of materials design methods

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npj Computational Materials 2024年第1期10卷 2280-2296页

作者： Kamal Choudhary Daniel Wines Kangming Li Kevin F.Garrity Vishu Gupta Aldo H.Romero Jaron T.Krogel Kayahan Saritas Addis Fuhr Panchapakesan Ganesh Paul R.C.Kent Keqiang Yan Yuchao Lin Shuiwang Ji Ben Blaiszik Patrick Reiser Pascal Friederich Ankit Agrawal Pratyush Tiwary Eric Beyerle Peter Minch Trevor David Rhone Ichiro Takeuchi Robert B.Wexler Arun Mannodi-Kanakkithodi Elif Ertekin Avanish Mishra Nithin Mathew Mitchell Wood Andrew Dale Rohskopf Jason Hattrick-Simpers Shih-Han Wang Luke E.K.Achenie Hongliang Xin Maureen Williams Adam J.Biacchi Francesca Tavazza Material Measurement Laboratory National Institute of Standards and TechnologyGaithersburgMD20899USA Department of Materials Science and Engineering University of Toronto27 King’s College CirTorontoONCanada Department of Electrical and Computer Engineering Northwestern UniversityEvanstonIL 60208USA Lewis-Sigler Institute for Integrative Genomics Princeton UniversityPrincetonNJ 08544USA Ludwig Institute for Cancer Research Princeton UniversityPrincetonNJ 08544USA Department of Physics and Astronomy West Virginia UniversityMorgantownWV 26506USA Materials Science and Technology Division Oak Ridge National LaboratoryOak RidgeTN 37831USA Center for Nanophase Materials Science Oak Ridge National LaboratoryOak RidgeTN 37831USA Computational Sciences and Engineering Division Oak Ridge National LaboratoryOak RidgeTN 37831USA Department of Computer Science and Engineering Texas A&M UniversityCollege StationTX 77843USA Globus University of ChicagoChicagoIL 60637USA Data Science and Learning Division Argonne National LabLemontIL 60439USA Institute of Nanotechnology Karlsruhe Institute of TechnologyKaiserstraße 1276131 KarlsruheGermany Institute of Theoretical Informatics Karlsruhe Institute of TechnologyKaiserstraße 1276131 KarlsruheGermany Department of Chemistry and Biochemistry and Institute for Physical Science and Technology University of MarylandCollege ParkMD 20742USA Department of Physics Applied Physics and AstronomyRensselaer Polytechnic InstituteTroyNY12180USA Department of Materials Science and Engineering University of MarylandCollege ParkMD20742USA Department of Chemistry and Institute of Materials Science and Engineering Washington University in St.LouisSt.LouisMO63130USA School of Materials Engineering Purdue UniversityWest LafayetteIN47907USA Department of Mechanical Science and Engineering University of Illinois Urbana-ChampaignUrbanaIllinois 61801USA Materials Research Laboratory University of Illinois Urbana-ChampaignUrbanaIL 61801USA Theore

Lack of rigorous reproducibility and validation are significant hurdles for scientific development across many *** science,in particular,encompasses a variety of experimental and theoretical approaches that require careful *** efforts have been developed previously to mitigate these ***,a comprehensive comparison and benchmarking on an integrated platform with multiple data modalities with perfect and defect materials data is still *** work introduces JARVIS-Leaderboard,an open-source and community-driven platform that facilitates benchmarking and enhances *** platform allows users to set up benchmarks with customtasks and enables contributions in the form of dataset,code,and meta-data *** cover the following materials design categories:Artificial Intelligence(AI),Electronic Structure(ES).

关键词： rigorous perfect enable

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Automatically derived stateful network functions including non-field attributes

Automatically derived stateful network functions including n...

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IEEE International Conference on Trust, Security and Privacy in computing and Communications (TrustCom)

作者： Bin Yuan Shengyao Sun Xianjun Deng Deqing Zou Haoyu Chen Shenghui Li Hai Jin School of Cyber Science and Engineering Huazhong University of Science and Technology Wuhan China National Engineering Research Center for Big Data Technology and System Services Computing Technology and System Lab Hubei Engineering Research Center on Big Data Security Shenzhen Research Institute Huazhong University of Science and Technology Shenzhen China School of Computer Science and Technology Huazhong University of Science and Technology Wuhan China Cluster and Grid Computing Lab

ISBN: (纸本)9781665416597

The modern network consists of thousands of network devices from different suppliers that perform distinct code-pendent functions, such as routing, switching, modifying header fields, and access control across physical and virtual networks. Because of the network complexity, the network is prone to a wide range of errors, such as false-positive configuration, software errors, or unexpected interactions across protocols. These errors can lead to loops, sub-optimal routing, path leaks, black holes, and access control violations that make services unavailable, vulnerable to exploitation, or prone to attacks (e.g., DDoS attacks). To mitigate these problems, network operators deploy many different stateful network functions, like firewalls, NATs, load balancers, and intrusion-prevention boxes. They have become an important part of networks today, so it is critical to verify that these network functions are the same as expected deployments. All static network verification tools are meant to rigorously check network software or configuration for bugs before deployment. They usually use handwritten models or limited derivation models that are error-prone and ignore the fact that even the same type of network functions (from different vendors) still have different implementation details. In this paper, we propose a tool that can automatically synthesize more realistic and high-fidelity models that include stateful network functions with non-field attributes. We design an inferring algorithm, implement the transformation between data packages and symbolic packages, and obtain a finite state machine that can accurately express the actions of black-box network functions for a given configuration.

关键词： Access control Performance evaluation Privacy Protocols Computational modeling Switches Routing

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基于污点和概率的逃逸恶意软件多路径探索

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Security and Safety 2023年第3期2卷 83-106页

作者：徐钫洲张网羌卫中金海 National Engineering Research Center for Big Data Technology and System Wuhan 430074China Services Computing Technology and System Lab Cluster and Grid Computing LabWuhan 430074China Hubei Key Laboratory of Distributed System Security Hubei Engineering Research Center on Big Data SecurityWuhan 430074China School of Cyber Science and Engineering Huazhong University of Science and TechnologyWuhan 430074China School of Computer Science and Technology Huazhong University of Science and TechnologyWuhan 430074China Jinyinhu Laboratory Wuhan 430040China

Static analysis is often impeded by malware obfuscation techniques,such as encryption and packing,whereas dynamic analysis tends to be more resistant to obfuscation by leveraging concrete execution ***,malware can employ evasive techniques to detect the analysis environment and alter its behavior *** known evasive techniques can be explicitly dismantled,the challenge lies in generically dismantling evasions without full knowledge of their conditions or implementations,such as logic bombs that rely on uncertain conditions,let alone unsupported evasive techniques,which contain evasions without corresponding dismantling strategies and those leveraging unknown *** this paper,we present Antitoxin,a prototype for automatically exploring evasive *** utilizes multi-path exploration guided by taint analysis and probability calculations to effectively dismantle evasive *** probabilities of branch execution are derived from dynamic coverage,while taint analysis helps identify paths associated with evasive techniques that rely on uncertain ***,Antitoxin prioritizes branches with lower execution probabilities and those influenced by taint analysis for multi-path *** is achieved through forced execution,which forcefully sets the outcomes of branches on selected ***,Antitoxin employs active anti-evasion countermeasures to dismantle known evasive techniques,thereby reducing exploration ***,Antitoxin provides valuable insights into sensitive behaviors,facilitating deeper manual *** experiments on a set of highly evasive samples demonstrate that Antitoxin can effectively dismantle evasive techniques in a generic *** probability calculations guide the multi-path exploration of evasions without requiring prior knowledge of their conditions or implementations,enabling the dismantling of unsupported techniques such as C2 and signific

关键词： Malware analysis dynamic binary instrumentation forced execution taint analysis evasion detection

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Double variance reduction: a smoothing trick for composite optimization problems without first-order gradient 24

Double variance reduction: a smoothing trick for composite o...

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Proceedings of the 41st International Conference on Machine Learning

作者： Hao Di Haishan Ye Yueling Zhang Xiangyu Chang Guang Dai Ivor W. Tsang Center for Intelligent Decision-Making and Machine Learning School of Management Xi'an Jiaotong University China and SGIT AI Lab State Grid Corporation of China International Business School Beijing Foreign Studies University Beijing China Center for Intelligent Decision-Making and Machine Learning School of Management Xi'an Jiaotong University China SGIT AI Lab State Grid Corporation of China CFAR and IHPC Agency for Science Technology and Research (A*STAR) Singapore and College of Computing and Data Science NTU Singapore

Variance reduction techniques are designed to decrease the sampling variance, thereby accelerating convergence rates of first-order (FO) and zeroth-order (ZO) optimization methods. However, in composite optimization problems, ZO methods encounter an additional variance called the coordinate-wise variance, which stems from the random gradient estimation. To reduce this variance, prior works require estimating all partial derivatives, essentially approximating FO information. This approach demands O(d) function evaluations (d is the dimension size), which incurs substantial computational costs and is prohibitive in high-dimensional scenarios. This paper proposes the Zeroth-order Proximal Double Variance Reduction (ZPDVR) method, which utilizes the averaging trick to reduce both sampling and coordinate-wise variances. Compared to prior methods, ZPDVR relies solely on random gradient estimates, calls the stochastic zeroth-order oracle (SZO) in expectation O(1) times per iteration, and achieves the optimal O(d(n+κ) log(1/ε)) SZO query complexity in the strongly convex and smooth setting, where κ represents the condition number and ε is the desired accuracy. Empirical results validate ZPDVR's linear convergence and demonstrate its superior performance over other related methods.

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A deep learning system for predicting time to progression of diabetic retinopathy

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NATURE MEDICINE 2024年第2期30卷 358-359页

作者： [Anonymous] Shanghai Belt and Road International Joint Laboratory for Intelligent Prevention and Treatment of Metabolic Disorders Department of Computer Science and Engineering School of Electronic Information and Electrical Engineering Shanghai Jiao Tong University Department of Endocrinology and Metabolism Shanghai Sixth People’s Hospital Affiliated to Shanghai Jiao Tong University School of Medicine Shanghai Diabetes Institute Shanghai Clinical Center for Diabetes Shanghai China MOE Key Laboratory of AI School of Electronic Information and Electrical Engineering Shanghai Jiao Tong University Shanghai China Department of Ophthalmology Huadong Sanatorium Wuxi China Department of Ophthalmology Shanghai Sixth People’s Hospital Affiliated to Shanghai Jiao Tong University School of Medicine Shanghai China Department of Ophthalmology and Visual Sciences The Chinese University of Hong Kong Hong Kong China Singapore Eye Research Institute Singapore National Eye Centre Singapore Singapore Department of Computer Science and Engineering The Hong Kong University of Science and Technology Hong Kong China Department of Chemical and Biological Engineering The Hong Kong University of Science and Technology Hong Kong China State Key Laboratory of Ophthalmology Zhongshan Ophthalmic Center Sun Yat-sen University Guangdong Provincial Key Laboratory of Ophthalmology and Visual Science Guangzhou China Department of Ophthalmology Peking Union Medical College Hospital Peking Union Medical College Chinese Academy of Medical Sciences Beijing China Medical Records and Statistics Office Shanghai Sixth People’s Hospital Affiliated to Shanghai Jiao Tong University School of Medicine Shanghai China Department of Geriatrics Tongji Hospital Tongji Medical College Huazhong University of Science and Technology Wuhan China National Engineering Research Center for Big Data Technology and System Services Computing Technology and System Lab Cluster and Grid Computing Lab School of Computer Science and Tech

We developed and validated a deep learning system (termed DeepDR Plus) in a diverse, multiethnic, multi-country dataset to predict personalized risk and time to progression of diabetic retinopathy. We show that DeepDR Plus can be integrated into the clinical workflow to promote individualized intervention strategies for the management of diabetic retinopathy.

关键词： Diabetes complications Machine learning Predictive markers

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AdaFuse: Adaptive Medical Image Fusion Based on Spatial-Frequential Cross Attention

arXiv

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arXiv 2023年

作者： Gu, Xianming Wang, Lihui Deng, Zeyu Cao, Ying Huang, Xingyu Zhu, Yue-Min Engineering Research Center of Text Computing & Cognitive Intelligence Ministry of Education Key Laboratory of Intelligent Medical Image Analysis and Precise Diagnosis of Guizhou Province State Key Laboratory of Public Big Data College of Computer Science and Technology Guizhou University Guiyang550025 China University Lyon INSA Lyon CNRS Inserm IRP Metislab CREATIS UMR5220 U1206 Lyon69621 France

Multi-modal medical image fusion is essential for the precise clinical diagnosis and surgical navigation since it can merge the complementary information in multi-modalities into a single image. The quality of the fused image depends on the extracted single modality features as well as the fusion rules for multi-modal information. Existing deep learning-based fusion methods can fully exploit the semantic features of each modality, they cannot distinguish the effective low and high frequency information of each modality and fuse them adaptively. To address this issue, we propose AdaFuse, in which multimodal image information is fused adaptively through frequency-guided attention mechanism based on Fourier transform. Specifically, we propose the cross-attention fusion (CAF) block, which adaptively fuses features of two modalities in the spatial and frequency domains by exchanging key and query values, and then calculates the cross-attention scores between the spatial and frequency features to further guide the spatial-frequential information fusion. The CAF block enhances the high-frequency features of the different modalities so that the details in the fused images can be retained. Moreover, we design a novel loss function composed of structure loss and content loss to preserve both low and high frequency information. Extensive comparison experiments on several datasets demonstrate that the proposed method outperforms state-of-the-art methods in terms of both visual quality and quantitative metrics. The ablation experiments also validate the effectiveness of the proposed loss and fusion strategy. © 2023, CC BY.

关键词： Deep learning

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Transductive learning for unsupervised text style transfer

arXiv

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arXiv 2021年

作者： Xiao, Fei Pang, Liang Lan, Yanyan Wang, Yan Shen, Huawei Cheng, Xueqi Data Intelligence System Research Center Cas Key Lab of Network Data Science and Technology Institute of Computing Technology Chinese Academy of Sciences Institute for Ai Industry Research Tsinghua University University of Chinese Academy of Sciences Tencent Ai Lab

Unsupervised style transfer models are mainly based on an inductive learning approach, which represents the style as embeddings, decoder parameters, or discriminator parameters and directly applies these general rules to the test cases. However, the lacking of parallel corpus hinders the ability of these inductive learning methods on this task. As a result, it is likely to cause severe inconsistent style expressions, like the salad is rude. To tackle this problem, we propose a novel transductive learning approach in this paper, based on a retrieval-based context-aware style representation. Specifically, an attentional encoderdecoder with a retriever framework is utilized. It involves top-K relevant sentences in the target style in the transfer process. In this way, we can learn a context-aware style embedding to alleviate the above inconsistency problem. In this paper, both sparse (BM25) and dense retrieval functions (MIPS) are used, and two objective functions are designed to facilitate joint learning. Experimental results show that our method outperforms several strong baselines. The proposed transductive learning approach is general and effective to the task of unsupervised style transfer, and we will apply it to the other two typical methods in the future. © 2021, CC BY.

关键词： Embeddings

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