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IEEE EMBS International Conference on Information Technology Applications in Biomedicine (ITAB)

作者： Shun-Cheng Chang Hsin-Pei Yu Yi-Hsien Hsieh Pochuang Wang Weichung Wang Tung-Hung Su Jia-Horng Kao Che Lin Graduate Institute of Communication Engineering National Taiwan University (NTU) Taipei Taiwan Department of Computer Science and Information Engineering NTU Taipei Taiwan Institute of Applied Mathematical Sciences NTU Taipei Taiwan Department of Internal Medicine Division of Gastroenterology and Hepatology National Taiwan University Hospital Taipei Taiwan Department of Electrical Engineering NTU Taipei Taiwan Center for Advanced Computing and Imaging in Biomedicine NTU Taipei Taiwan Smart Medicine and Health Informatics Program NTU Taipei Taiwan

ISBN: (数字)9798350351552

ISBN: (纸本)9798350351569

Deep learning has revolutionized medical imaging, offering advanced methods for accurate diagnosis and treatment planning. The BCLC staging system is crucial for staging Hepatocellular Carcinoma (HCC), a high-mortality cancer. An automated BCLC staging system could significantly enhance diagnosis and treatment planning efficiency. However, we found that BCLC staging, which is directly related to the size and number of liver tumors, aligns well with the principles of the Multiple Instance Learning (MIL) framework. To effectively achieve this, we proposed a new preprocessing technique called Masked Cropping and Padding(MCP), which addresses the variability in liver volumes and ensures consistent input sizes. This technique preserves the structural integrity of the liver, facilitating more effective learning. Furthermore, we introduced Re ViT, a novel hybrid model that integrates the local feature extraction capabilities of Convolutional Neural Networks (CNNs) with the global context modeling of Vision Transformers (ViTs). Re ViT leverages the strengths of both architectures within the MIL framework, enabling a robust and accurate approach for BCLC staging. We will further explore the trade-off between performance and interpretability by employing TopK Pooling strategies, as our model focuses on the most informative instances within each bag.

关键词： Visualization Accuracy Three-dimensional displays Liver Transformers Planning Convolutional neural networks Context modeling Biomedical imaging Tumors

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A study for understanding of tourist person trip pattern based on log data of Wi-Fi access points

A study for understanding of tourist person trip pattern bas...

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IEEE International Conference on Big Data

作者： Yu Ichifuji Yoshihide Matsuo Noriaki Koide Nobuhiro Akashi Yoshitaka Terai Toru Kobayashi Center for Information and Communication Technology Nagasaki University Nagasaki Japan Information and Society Research Division National Institute of Informatics Tokyo Japan Tourism promotion division Nagasaki Prefectural Government Nagasaki Japan Nagasaki Business Department Nippon Telegraph and Telephone WEST Corporation Nagasaki Japan Computer and Information Science Program School of Engineering Nagasaki University Nagasaki Japan

ISBN: (纸本)9781467390064

Statistical tourism data are critical to supporting tourism policy decisions. Such data are normally compiled via questionnaires or interviews, which requires both time and money, thus making such data unusable for policy decision-making to occur in real-time. To support real-time policy decision-making, we focused on person trip data for promoting tourism. The city government can reflect such data on tourism events and guidebooks if it has a grasp of tourist person trip patterns. In this paper, we focused on using the log data of Wi-Fi access points available at each tourist spot. Wi-Fi access points have log data that keep track of the timestamps of users connecting and disconnecting from the Wi-Fi. We can visualize the movements of tourists using these data; however, there is bias among Wi-Fi users. Therefore, we must evaluate the Wi-Fi log data to verify they are representative of almost all tourists. More specifically, we evaluated log data for Goto City to determine whether the government's data were equivalent to the log data. We also showed the possibility of visualizing tourist movement history based on our log data.

关键词： IEEE 802.11 Standard Urban areas Sensors Government History Data visualization Mobile communication

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Application of Interpolation Image by using Bi-Cubic Algorithm

Application of Interpolation Image by using Bi-Cubic Algorit...

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2018 Workshop on Multidisciplinary and Its Applications: Applied Mathematics, computer Science, Information Systems, and Information Technology, WMA-Mathcomtech 2018

作者： Abdullah, Dahlan Fajriana, F. Maryana, M. Rosnita, Lidya Utama Siahaan, Andysah Putera Rahim, Robbi Harliana, P. Harmayani, H. Ginting, Zainuddin Erliana, Cut Ita Irwansyah, Defi Zulmiardi, Z. Khaddafi, Muammar Milanie, Feby Aspan, Henry Huda, Ismul Saddhono, Kundharu Mulyaningsih, Indrya Moonti, Roy Marthen Parwito, P. Djanggih, Hardianto Amalia, Ainna Winarno, Edy Hadikurniawati, Wiwien Department of Informatics Universitas Malikussaleh Aceh Indonesia School of Computer and Communication Engineering Universiti Malaysia Perlis Malaysia Department of Informatics Engineering Sekolah Tinggi Teknik Harapan Medan Indonesia Department of Informatics AMIK Intel Com Global Indo Indonesia Department of Chemical Engineering Universitas Malikussaleh Aceh Indonesia Department of Industrial Engineering Universitas Malikussaleh Aceh Indonesia Department of Mechanical Engineering Universitas Malikussaleh Aceh Indonesia Department of Accounting Universitas Malikussaleh Aceh Indonesia Universitas Pembangunan Panca Budi Medan Indonesia Universitas Syiah Kuala Aceh Indonesia Graduate Program Universitas Sebelas Maret Surakarta Indonesia Indonesian Language Teaching Department Institut Agama Islam Negeri Syekh Nurjati Cirebon Indonesia Department of Law Universitas Gorontalo Gorontalo Indonesia Department of Agrotechnology Universitas Ratu Samban Bengkulu Indonesia Department of Law Universitas Tompotika Luwuk Banggai Luwuk Indonesia Islamic Institut of Miftahul Ula Kertosono Nganjuk-East-Java Indonesia Faculty of Information Technology Universitas Stikubank Semarang Indonesia

Image magnification is one of the branches in digital image processing that is often required in various applications such as in the field of medicine, multimedia, and in satellite imagery. As technology grows, more and more methods are used for image enlargement. In this study, the image enlargement process performs by using Bi-Cubic spline interpolation method, and the result of image try to compare between the original one and picture after enlargement. © Published under licence by IOP Publishing Ltd.

关键词： Satellite imagery

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ENIGMA-Meditation: Worldwide Consortium for Neuroscientific Investigations of Meditation Practices

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Biological Psychiatry: Cognitive Neuroscience and Neuroimaging 2025年第4期10卷 425-436页

作者： Ganesan, Saampras Barrios, Fernando A. Batta, Ishaan Bauer, Clemens C.C. Braver, Todd S. Brewer, Judson A. Brown, Kirk Warren Cahn, Rael Cain, Joshua A. Calhoun, Vince D. Cao, Lei Chetelat, Gaël Ching, Christopher R.K. Creswell, J. David Dagnino, Paulina Clara Davanger, Svend Davidson, Richard J. Deco, Gustavo Dutcher, Janine M. Escrichs, Anira Eyler, Lisa T. Fani, Negar Farb, Norman A.S. Fialoke, Suruchi Fresco, David M. Garg, Rahul Garland, Eric L. Goldin, Philippe Hafeman, Danella M. Jahanshad, Neda Kang, Yoona Khalsa, Sahib S. Kirlic, Namik Lazar, Sara W. Lutz, Antoine McDermott, Timothy J. Pagnoni, Giuseppe Piguet, Camille Prakash, Ruchika S. Rahrig, Hadley Reggente, Nicco Saccaro, Luigi F. Sacchet, Matthew D. Siegle, Greg J. Tang, Yi-Yuan Thomopoulos, Sophia I. Thompson, Paul M. Torske, Alyssa Treves, Isaac N. Tripathi, Vaibhav Tsuchiyagaito, Aki Turner, Matthew D. Vago, David R. Valk, Sofie Zeidan, Fadel Zalesky, Andrew Turner, Jessica A. King, Anthony P. Department of Biomedical Engineering The University of Melbourne Carlton VIC Australia Contemplative Studies Centre Melbourne School of Psychological Sciences The University of Melbourne Melbourne VIC Australia Systems Lab of Neuroscience Neuropsychiatry and Neuroengineering The University of Melbourne Parkville VIC Australia Universidad Nacional Autónoma de México Instituto de Neurobiolgía México Querétaro Mexico Center for Translational Research in Neuroimaging and Data Science: Georgia State University Georgia Institute of Technology and Emory University Atlanta GA United States Department of Psychology Northeastern University Boston Massachusetts Brain and Cognitive Science McGovern Institute for Brain Research Massachusetts Institute of Technology Cambridge Massachusetts Department of Psychological and Brain Sciences Washington University St. Louis Missouri Department of Behavioral and Social Sciences Brown University School of Public Health Providence Rhode Island Department of Psychology Carnegie Mellon University Pittsburgh PA United States University of Southern California Department of Psychiatry & Behavioral Sciences Los Angeles California University of Southern California Center for Mindfulness Science Los Angeles California Institute for Advanced Consciousness Studies Santa Monica California Department of Psychiatry and Behavioral Health The Ohio State University College of Medicine Columbus OH United States Normandie University Université de Caen Normandie INSERM U1237 Neuropresage Team Cyceron Caen France Imaging Genetics Center Mark and Mary Stevens Neuroimaging and Informatics Institute Keck School of Medicine of the University of Southern California Los Angeles California Desert-Pacific Mental Illness Research Education and Clinical Center VA San Diego Healthcare System San Diego California Computational Neuroscience Group Center for Brain and Cognition Department of Information and Communication Technologies Universitat Pompeu Fa

Meditation is a family of ancient and contemporary contemplative mind-body practices that can modulate psychological processes, awareness, and mental states. Over the last 40 years, clinical science has manualized meditation practices and designed various meditation interventions that have shown therapeutic efficacy for disorders including depression, pain, addiction, and anxiety. Over the past decade, neuroimaging has been used to examine the neuroscientific basis of meditation practices, effects, states, and outcomes for clinical and nonclinical populations. However, the generalizability and replicability of current neuroscientific models of meditation have not yet been established, because they are largely based on small datasets entrenched with heterogeneity along several domains of meditation (e.g., practice types, meditation experience, clinical disorder targeted), experimental design, and neuroimaging methods (e.g., preprocessing, analysis, task-based, resting-state, structural magnetic resonance imaging). These limitations have precluded a nuanced and rigorous neuroscientific phenotyping of meditation practices and their potential benefits. Here, we present ENIGMA (Enhancing Neuro Imaging Genetics through Meta Analysis)–Meditation, the first worldwide collaborative consortium for neuroscientific investigations of meditation practices. ENIGMA-Meditation will enable systematic meta- and mega-analyses of globally distributed neuroimaging datasets of meditation using shared, standardized neuroimaging methods and tools to improve statistical power and generalizability. Through this powerful collaborative framework, existing neuroscientific accounts of meditation practices can be extended to generate novel and rigorous neuroscientific insights that account for multidomain heterogeneity. ENIGMA-Meditation will inform neuroscientific mechanisms that underlie therapeutic action of meditation practices on psychological and cognitive attributes, thereby advancing the f

关键词： Consortium ENIGMA Magnetic resonance imaging (MRI) Meditation Mindfulness Neuroimaging

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Cell2Sentence: Teaching Large Language Models the Language of Biology 41

Cell2Sentence: Teaching Large Language Models the Language o...

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41st International Conference on Machine Learning, ICML 2024

作者： Levine, Daniel Rizvi, Syed Asad Lévy, Sacha Pallikkavaliyaveetil, Nazreen Zhang, David Chen, Xingyu Ghadermarzi, Sina Wu, Ruiming Zheng, Zihe Vrkic, Ivan Zhong, Anna Raskin, Daphne Han, Insu de Oliveira Fonseca, Antonio Henrique Caro, Josue Ortega Karbasi, Amin Dhodapkar, Rahul M. van Dijk, David Department of Computer Science Yale University New HavenCT United States School of Engineering Applied Science University of Pennsylvania PhiladelphiaPA United States School of Computer and Communication Sciences Swiss Federal Institute of Technology Lausanne Lausanne Switzerland Department of Neuroscience Yale School of Medicine New HavenCT United States Wu Tsai Institute Yale University New HavenCT United States Google United States Yale Institute for Foundations of Data Science New HavenCT United States Yale School of Engineering and Applied Science New HavenCT United States Roski Eye Institute University of Southern California Los AngelesCA United States Yale School of Medicine New HavenCT United States Cardiovascular Research Center Yale School of Medicine New HavenCT United States Interdepartmental Program in Computational Biology & Bioinformatics Yale University New HavenCT United States

We introduce Cell2Sentence (C2S), a novel method to directly adapt large language models to a biological context, specifically single-cell transcriptomics. By transforming gene expression data into"cell sentences," C2S bridges the gap between natural language processing and biology. We demonstrate cell sentences enable the finetuning of language models for diverse tasks in biology, including cell generation, complex cell-type annotation, and direct data-driven text generation. Our experiments reveal that GPT-2, when fine-tuned with C2S, can generate biologically valid cells based on cell type inputs, and accurately predict cell types from cell sentences. This illustrates that language models, through C2S finetuning, can acquire a significant understanding of single-cell biology while maintaining robust text generation capabilities. C2S offers a flexible, accessible framework to integrate natural language processing with transcriptomics, utilizing existing models and libraries for a wide range of biological applications. Copyright 2024 by the author(s)

关键词： Gene expression

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Enhancing Deep Reinforcement Learning: A Tutorial on Generative Diffusion Models in Network Optimization

arXiv

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arXiv 2023年

作者： Du, Hongyang Zhang, Ruichen Liu, Yinqiu Wang, Jiacheng Lin, Yijing Li, Zonghang Niyato, Dusit Kang, Jiawen Xiong, Zehui Cui, Shuguang Ai, Bo Zhou, Haibo Kim, Dong In The School of Computer Science and Engineering The Energy Research Institute @ NTU Interdisciplinary Graduate Program Nanyang Technological University Singapore The School of Computer Science and Engineering Nanyang Technological University Singapore The State Key Laboratory of Networking and Switching Technology Beijing University of Posts and Telecommunications China The School of Information and Communication Engineering University of Electronic Sciences and Technology of China Chengdu China The School of Automation Guangdong University of Technology China The Pillar of Information Systems Technology and Design Singapore University of Technology and Design Singapore Shenzhen China The State Key Laboratory of Rail Traffic Control and Safety Beijing Jiaotong University Beijing100044 China School of Electronic Science and Engineering Nanjing University Jiangsu Nanjing210093 China The Department of Electrical and Computer Engineering Sungkyunkwan University Suwon16419 Korea Republic of

Generative Diffusion Models (GDMs) have emerged as a transformative force in the realm of Generative Artificial Intelligence (GenAI), demonstrating their versatility and efficacy across various applications. The ability to model complex data distributions and generate high-quality samples has made GDMs particularly effective in tasks such as image generation and reinforcement learning. Furthermore, their iterative nature, which involves a series of noise addition and denoising steps, is a powerful and unique approach to learning and generating data. This paper serves as a comprehensive tutorial on applying GDMs in network optimization tasks. We delve into the strengths of GDMs, emphasizing their wide applicability across various domains, such as vision, text, and audio generation. We detail how GDMs can be effectively harnessed to solve complex optimization problems inherent in networks. The paper first provides a basic background of GDMs and their applications in network optimization. This is followed by a series of case studies, showcasing the integration of GDMs with Deep Reinforcement Learning (DRL), incentive mechanism design, Semantic communications (SemCom), Internet of Vehicles (IoV) networks, etc. These case studies underscore the practicality and efficacy of GDMs in real-world scenarios, offering insights into network design. We conclude with a discussion on potential future directions for GDM research and applications, providing major insights into how they can continue to shape the future of network optimization. © 2023, CC BY.

关键词： Reinforcement learning

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Deep Learning in Smart Healthcare: A GAN-based Approach for Imbalanced Alzheimer's Disease Classification

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Procedia computer Science 2024年 241卷 146-153页

作者： Hina Tufail Abdul Ahad Ira Puspitasari Ibraheem Shayea Paulo Jorge Coelho Ivan Miguel Pires Department of Computer Science University of Management and Technology Sialkot Pakistan Information System Study Program Faculty of Science and Technology Universitas Airlangga School of Software Northwestern Polytechnical University Xian Shaanxi P.R. China Department of Electronics and Communication Engineering Istanbul Technical University(ITU) Turkey Polytechnic University of Leiria Leiria Portugal Institute for Systems Engineering and Computers at Coimbra (INESC Coimbra) Coimbra Portugal Instituto de Telecomunicações Escola Superior de Tecnologia e Gestão de Águeda Universidade de Aveiro Águeda Portugal

Alzheimer's disease (AD) is a type of dementia that leads to memory loss and impairment, which afects patients’ lives badly. It is not curable yet, but its progression can be slowed down if detected at earlier stages. In this research study, we propose a transfer learning-based convolutional neural network (CNN) model to classify magnetic resonance imaging (MRI) into one of four stages of Alzheimer's disease. One of the major limitations of the deep learning-based classification model is the non-availability of healthcare datasets related to AD. The widely used Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset has a major class imbalance issue. We propose a generative adversarial network (GAN) based data augmentation technique to overcome the data imbalance. This promotes the investigation of applying GANs to generate synthetic samples for minority classes in Alzheimer's disease datasets to enhance classification performance. The results show the progression in the overall classification process of AD.

关键词： Alzheimer disease (AD) Deep learning Convolutional Neural Network (CNN) computer-aided diagnosis (CAD)

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DEA and Fuzzy Simple Additive Weighting for Benchmarking Qualitative Data 1

DEA and Fuzzy Simple Additive Weighting for Benchmarking Qua...

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1st International Conference of SNIKOM 2018, ICoSNIKOM 2018

作者： Abdullah, Dahlan Hartono, H. Ongko, Erianto Erliana, Cut Ita Irwansyah, Defi Iskandar, Akbar Sari, Ayu Esteka Abdussakir Yuniningsih Siregar, Nurintan Asyiah Kahar, Muhammad Syahrul Waliulu, Raditya Faisal Amalia, Ainna Kurniasih, Nuning Arifin, Muhammad Muzid, Syafiul Department of Informatics Universitas Malikussaleh Aceh Indonesia Department of Computer Science STMIK IBBI Medan Indonesia Department of Informatics Akademi Teknologi Industri Immanuel Medan Indonesia Department of Industrial Engineering Universitas Malikussaleh Aceh Indonesia Department of Informatics STMIK AKBA Makassar Indonesia Department of Management STIE Sakti Alam Kerinci Jambi Indonesia Department of Mathematics Education State Islamic University of Malang Malang Indonesia Department of Economic and Business Universitas Pembangunan Nasional Veteran Surabaya Indonesia Department of Management STIE Labuhanbatu Sumatera Utara Indonesia Mathematics Education Department Universitas Muhammadiyah Sorong Sorong Indonesia Informatics Engineering Department Universitas Muhammadiyah Sorong Sorong Indonesia Islamic Institut of Miftahul Ula Kertosono Nganjuk East Java Indonesia Faculty of Communication Sciences Library and Information Science Program Universitas Padjadjaran Bandung Indonesia Department of Information System Faculty of Engineering Universitas Muria Kudus Indonesia Information System Department Universitas Muria Kudus Indonesia

Data Envelopment Analysis (DEA) is one method that is often used in the benchmarking process. The benchmarking process with DEA is often faced with problems where there is a Decision Making Unit (DMU) both Input and Output which is not in the form of qualitative data but in the form of qualitative data. Qualitative data requires an assessment from the appraiser so that it can become quantitative data. This study will use the Fuzzy Simple Additive Weighting method to convert qualitative data into quantitative. The results of this study will produce a model that integrates DEA with Fuzzy Simple Additive Weighting. © Published under licence by IOP Publishing Ltd.

关键词： Data envelopment analysis

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Energy Preservation in MANET Using Self-Adaptive CH Selection with Advanced Genetic Algorithm

Energy Preservation in MANET Using Self-Adaptive CH Selectio...

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Advanced engineering and Technologies (ICONNIC), International Conference on

作者： Bonifacius Vicky Indriyono Natalinda Pamungkas Fatima Hashim Abbas Ery Mintorini Mohammed Almohamadi Sarmad Nozad Mahmood Sameer Alani Ahmed H. Alkhayyat Eko Hari Rachmawanto Information System University of Dian Nuswantoro Kediri Indonesia Medical Laboratories Techniques Department Al-Mustaqbal University College Hillah Babil Iraq Visual Communication Design University of Dian Nuswantoro Kediri Indonesia College of Information Technology Imam Ja'afar Al-Sadiq University Al-Muthanna Iraq Computer Technology Engineering College of Engineering Technology Al-Kitab University Iraq Medical Laboratories Techniques University of Mashreq Research center Baghdad Iraq College of technical engineering University of Mashreq The Islamic University Najaf Iraq Study Program in Informatics Engineering University of Dian Nuswantoro Semarang Indonesia

Mobile Adhoc Networks (MANETs) is an emerging technology in both the industrial and academic research. The major drawback in MANETs is improving the battery capacity. MANETs are dynamic in nature therefore during communication it consumes more energy that reduces the overall energy efficiency of the network. Many past and present researches are concern about this problem. In this paper, Energy Preservation in MANETs using Self-Adaptive Cluster Head Selection with Advanced Genetic Algorithm (EPMSA-CHAG) approach is proposed where the CH selection is performed using two segments; they are initial parameter based on CH selection and Advanced Genetic Algorithm (AGA) based CH selection. At the initial stage the parameters which are considered for the CH selection are node degree, node stability, distance, residual energy, and speed and delivery rate. Using these parameters are the best fit for CH selection is chosen then in order to find the optimal best fit from the best fit calculation, Advanced Genetic Algorithm (AGA). The proposed EPMSA-CHAG approach is simulated using NS2 and the parameters which are considered for the performance analysis are packet delivery rate, energy efficiency, end to end delay, routing overhead and throughput. The methods that are taken for the comparative analysis are HLSPM-CHSR and HAMBO-CHLD. From the results calculated it is proven that the proposed EPMSA-CHAG approach achieved high packet delivery rate, energy efficiency and throughput as well as lower end to end delay and routing overhead when compared with the earlier methods HLSPM-CHSR and HAMBO-CHLD.

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GEOAIDA applied to SPOT satellite image interpretation

GEOAIDA applied to SPOT satellite image interpretation

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GRSS/ISPRS Joint Workshop on Remote Sensing and Data Fusion over Urban Areas

作者： S. Muller R.Q. Feitosa G.L. Abelha Mota D.P. da Costa V.V. da Silva K. Tanisaki Institute of Communication Theory and Signal Processing University of Hanover Hanover Germany Department of Electrical Engineering Catholic University of Rio de Janeiro Rio de Janeiro Brasil Department of Computer Engineering State University of Rio de Janeiro Rio de Janeiro Brasil Applied Geology Department State University of Rio de Janeiro Rio de Janeiro Brasil Radioecology and Global Change Laboratory and Researcher of Geomatic Program State University of Rio de Janeiro Rio de Janeiro Brasil

This paper investigates the application of a knowledge-based approach, founded on semantic networks, to the automatic land use mapping assisted by low resolution satellite images. Like the visual photo-interpretation, the automatic image interpretation considers scene and sensors knowledge, delivered by an expert photo-interpreter, as well as additional information about the region like the digital elevation model, the position of the emergent rocks, the mapping of the water bodies and the road-network. By this means, the analysis of a scene can be automatically performed, mimicking the reasoning of the photo-interpreter. The implementation of such proposal employed the GEOAIDA [J. Buckner et al., June 2001] system, a flexible environment for image interpretation developed at the University of Hanover, which exploits semantic networks to structure the domain specific knowledge. In the reported experiments, a multispectral SPOT 3 XS image was analysed resulting were evaluated and compared with a manually made reference map of the investigated scene. The automatically obtained results were evaluated and compared with a manually made reference map of the investigated scene. The experimental results demonstrate the potential of a knowledge-based approach for low resolution satellite images interpretation.

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