The precise reconstruction of 3D objects from a single RGB image in complex scenes presents a critical challenge in virtual reality, autonomous driving, and robotics. Existing neural implicit 3D representation methods...
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We consider semidefinite programs (SDPs) with equality constraints. The variable to be optimized is a positive semidefinite matrix X of size n. Following the Burer–Monteiro approach, we optimize a factor Y of size n&...
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Machine learning models are changing the paradigm of molecular modeling, which is a fundamental tool for material science, chemistry, and computational biology. Of particular interest is the inter-atomic potential ene...
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Bayesian multinomial logistic-normal (MLN) models are popular for the analysis of sequence count data (e.g., microbiome or gene expression data) due to their ability to model multivariate count data with complex covar...
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Bayesian multinomial logistic-normal (MLN) models are popular for the analysis of sequence count data (e.g., microbiome or gene expression data) due to their ability to model multivariate count data with complex covariance structure. However, existing implementations of MLN models are limited to small datasets due to the non-conjugacy of the multinomial and logistic-normal distributions. Motivated by the need to develop efficient inference for Bayesian MLN models, we develop two key ideas. First, we develop the class of Marginally Latent Matrix-T Process (Marginally LTP) models. We demonstrate that many popular MLN models, including those with latent linear, non-linear, and dynamic linear structure are special cases of this class. Second, we develop an efficient inference scheme for Marginally LTP models with specific accelerations for the MLN subclass. Through application to MLN models, we demonstrate that our inference scheme are both highly accurate and often 4-5 orders of magnitude faster than MCMC.
In California's Central Valley, water management and crop health, particularly in rice cultivation, are critical. This paper details the application of Earth surface Mineral dust source InvesTigation (EMIT) hypers...
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ISBN:
(数字)9798350360325
ISBN:
(纸本)9798350360332
In California's Central Valley, water management and crop health, particularly in rice cultivation, are critical. This paper details the application of Earth surface Mineral dust source InvesTigation (EMIT) hyperspectral imaging, specifically employing Spectral Correlation Mapper (SCM) and Spectral Information Divergence (SID), for precise phenological analysis. By aligning EMIT data with Hyperion satellite references, we address spectral and geographical discrepancies. Our methodology includes seasonal sampling of spectral curves to capture the phenological stages of rice. Results show a strong correlation (R
2
= 0.86) between August EMIT and Reference dataset, emphasizing EMIT's utility in enhancing agricultural practices and water efficiency in the region, and highlighting the importance of understanding rice phenology for sustainable farming.
An accurate assessment of p53's functional statuses is critical for cancer genomic ***,there is a significant challenge in identifying tumors with non-mutational p53 inactivation which is not detectable through DN...
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An accurate assessment of p53's functional statuses is critical for cancer genomic ***,there is a significant challenge in identifying tumors with non-mutational p53 inactivation which is not detectable through DNA *** undetected cases are often misclassified as p53-normal,leading to inaccurate prognosis and downstream association *** address this issue,we built the support vector machine(SVM)models to systematically reassess p53's functional statuses in TP53 wild-type(TP53^(WT))tumors from multiple The Cancer Genome Atlas(TCGA)***-validation demonstrated the good performance of the SVM models with a mean area under the receiver operating characteristic curve(AUROC)of 0.9822,precision of 0.9747,and recall of *** study revealed that a significant proportion(87%-99%)of TP53^(WT) tumors actually had compromised p53 *** analyses uncovered that these genetically intact but functionally impaired(termed as predictively reduced function of p53 or TP53^(WT)-pRF)tumors exhibited genomic and pathophysiologic features akin to TP53-mutant tumors:heightened genomic instability and elevated levels of ***,patients with TP53^(WT)-pRF tumors experienced significantly shortened overall survival or progression-free survival compared to those with predictively normal function of p53(TP53^(WT)-pN)tumors,and these patients also displayed increased sensitivity to platinum-based chemotherapy and radiation therapy.
When group members claim a portion of limited resources, it is tempting to invest more effort to get a larger share. However, if everyone acts similarly, they all get the same piece they would obtain without extra eff...
An adaptive modeling method (AMM) that couples a deep neural network potential and a classical force field is introduced to address the accuracy-efficiency dilemma faced by the molecular simulation community. The AMM ...
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Imbalanced data classification problems appear quite commonly in real-world applications and impose great challenges to traditional classification approaches which work well only on balanced data but usually perform p...
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ISBN:
(纸本)9781665458429
Imbalanced data classification problems appear quite commonly in real-world applications and impose great challenges to traditional classification approaches which work well only on balanced data but usually perform poorly on the minority class when the data is imbalanced. Resampling preprocessing by oversampling the minority class or downsampling the majority class helps improve the performance but may suffer from overfitting or loss of information. In this paper we propose a novel method called pairwise robust support vector machine (PRSVM) to overcome the difficulty of imbalanced data classification. It adapts the non-convex robust support vector classification loss to the pairwise learning setting. In the training process, samples from the minority class and the majority class always appear as pairs. This automatically balances the impact of two classes. Simulations and real-world applications show that PRSVM is highly effective.
Acquisition of geospatial data by UAV has been acknowledged as an effective method of attaining reliable and quick high-resolution remote sensing data for analysis and decision-making in different applications such as...
Acquisition of geospatial data by UAV has been acknowledged as an effective method of attaining reliable and quick high-resolution remote sensing data for analysis and decision-making in different applications such as agriculture as it produces timely results, and it is affordable. UAVs coupled with other technological applications such as robotics, computing and deep learning facilitate the execution of precision agriculture. The execution of individual tree identification enables vivid description of the crop peak height and canopy for accurate estimation of issues related to crop growth such as biomass reduction, lodging, and stunted growth. A geospatial intelligence algorithm was developed to determine the lodging state of the crops. First, the optical imagery (RGB) was automatically annotated using maximum likelihood classification algorithm for faster acquisition of ground truth and to verify with the manually annotated image data for deep learning training. The acquired images were split for training of fine-tuned three deep learning methods including U-net, U-net++ and attention-residual Unet. The results show that each model has the tendency to learn patterns in data and predict lodged crops. Results from the analysis were validated by visual assessment of the time-series aerial images and validation data acquired from the ground truth data using k-fold cross validation approach.
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