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Medical Knowledge Graph:Data Sources,Construction,Reasoning,and Applications

Big Data Mining and Analytics 2023年第2期6卷 201-217页

作者： Xuehong Wu Junwen Duan Yi Pan Min Li Computer Science and Engineering Central South UniversityChangsha 410083China School of Computer Science Hunan First Normal UniversityChangsha 410006China School of Computer Science and Engineering Central South UniversityChangsha 410083China Computer Science and Control Engineering Shenzhen Institute of Advanced TechnologyChinese Academy of SciencesShenzhen 518000China

Medical knowledge graphs(MKGs)are the basis for intelligent health care,and they have been in use in a variety of intelligent medical ***,understanding the research and application development of MKGs will be crucial for future relevant research in the biomedical *** this end,we offer an in-depth review of MKG in this *** research begins with the examination of four types of medical information sources,knowledge graph creation methodologies,and six major themes for MKG ***,three popular models of reasoning from the viewpoint of knowledge reasoning are discussed.A reasoning implementation path(RIP)is proposed as a means of expressing the reasoning procedures for *** addition,we explore intelligent medical applications based on RIP and MKG and classify them into nine major ***,we summarize the current state of MKG research based on more than 130 publications and future challenges and opportunities.

关键词： medical knowledge graph knowledge graph construction knowledge reasoning intelligent medical applications intelligent healthcare

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IoT enabled plant leaf disease segmentation and multi-classification using mayfly bald eagle optimization-enabled machine learning

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Multimedia Tools and Applications 2024年第21期83卷 59747-59781页

作者： Mishra, Monalisa Choudhury, Prasenjit Pati, Bibudhendu Department of Computer Science and Engineering National Institute of Technology Durgapur India Department of Computer Science Rama Devi Women’s University Bhubaneswar India

Agricultural production is critical to the economy. This is one of the reasons why disease detection in plants is so important in agricultural settings, as plant disease is rather common. Farmers are not engaged in increasing their agricultural productivity daily since there are no technologies in the previous system to detect diseases in various crops in an agricultural environment. With the exponential population growth, food scarcity is a huge concern globally. In addition to this, the productivity of agricultural products has been highly impacted by the rapid increase in phytopathological adversities. The main challenges in leaf segmentation and plant disease identification are prior knowledge is required for segmentation, the implementation still lacks the accuracy of results, and more tweaking is required. To reduce the devastating impacts of illnesses on the economy, early detection of illnesses in plants is therefore essential. This paper describes an approach for segmenting and detecting plant leaf diseases based on images acquired via the Internet of Things (IoT) network. Here, a plant leaf area is segmented with a UNet, whose trainable parameters are optimized using the Mayfly Bald Eagle Optimization (MBEO) algorithm. Further, plant type classification is carried out by the Deep batch normalized AlexNet (DbneAlexNet), optimized by the Sine Cosine Algorithm-based Rider Neural Network (SCA-based RideNN). Finally, the DbneAlexNet, with weights adapted by the MBEO algorithm, is used to identify plant disease. The Plant Village dataset is used to evaluate the proposed DbneAlexNet-MBEO for plant-type classification and disease detection. The efficiency of the UNet-MBEO for segmentation is examined based on the Dice coefficient and Intersectin over Union (IOU) and has achieved superior values of 0.927 and 0.907. Moreover, the DbneAlexNet-MBEO is examined considering accuracy, Test Negative Rate (TNR), and Test Positive Rate (TPR) and offered superior values of 0

关键词： Classification (of information)

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Intrusion detection system and fuzzy ant colony optimization based secured routing in wireless sensor networks

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Soft Computing 2024年第17-18期28卷 10345-10367页

作者： Subramani, Shalini Selvi, M. School of Computer Science and Engineering Vellore Institute of Technology Vellore India

Recent advances in wireless sensor networks (WSNs) have brought the sensor based monitoring developments to the surface in many applications. In such a scenario, the security of communication is a major challenge in the effective delivery of the collected data due to the presence of malicious nodes. Moreover, since security and minimization of energy consumption are critical factors in designing techniques for multi-hop secure routing in wireless sensor networks, it is necessary to address the issues of security in the routing process. Hence, this paper proposes a novel intrusion detection system for enhancing the security and Fuzzy based Ant Colony Optimization based Secured Quality of Service Routing Protocol (F-ACO-SQoSRP) for increasing the security of communication and network performance in WSNs. Using this proposed intrusion detection system (IDS), the proposed model identifies the distinct and malicious behaviours of nodes. Additionally, a clustering algorithm has been proposed in this work, wherein the cluster head selection (CHS) is based on quality of service (QoS) measures and the trust values of nodes are measured using the intrusion detection system results. The proposed ACO based routing framework also predicts the best optimum and secured path to allow for effective communication across each link. The simulation results obtained from this work proved that the proposed secured routing algorithm provides better performance in terms of security using robust trust values, increase in packet delivery ratio and network lifetime reduction in delay and energy consumption when this work is compared with the existing secured routing systems. © The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2024.

关键词： Quality of service

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Explainable AI model for PDFMal detection based on gradient boosting model

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Neural Computing and Applications 2024年第34期36卷 21607-21622页

作者： Elattar, Mona Younes, Ahmed Gad, Ibrahim Elkabani, Islam Department of Computer Science Faculty of Science Tanta University Tanta31527 Egypt Department of Mathematics and Computer Science Faculty of Science Alexandria University Alexandria21511 Egypt Faculty of Computer Science and Engineering Al Alamein International University Alamein51718 Egypt

Portable document formats (PDFs) are widely used for document exchange due to their widespread usage and versatility. However, PDFs are highly vulnerable to malware attacks, which pose significant security risks. Existing defense mechanisms often struggle to effectively detect and mitigate these threats, highlighting the need for more robust solutions. This paper introduces a robust framework that uses advanced tree-based ensemble models to detect malicious PDFs using the Evasive-PDFMal2022 dataset. The proposed model achieves a recall rate of 100%, an accuracy rate of 99.95%, and a fast inference time of 0.1723 s. Furthermore, the framework exhibits minimal false positive and false negative rates, ensuring a high level of precision in distinguishing between malicious and benign PDFs. Shapley additive explanations are used to improve the interpretability and reliability of the model’s predictions. The results highlight the effectiveness of the proposed model in improving PDF document security and addressing the challenges posed by malware attacks. © The Author(s) 2024.

关键词： Explainable artificial intelligence (XAI) Malicious PDF Malware detection Tree-based ensemble models

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SUNet++: A Deep Network with Channel Attention for Small-Scale Object Segmentation on 3D Medical Images

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Tsinghua science and Technology 2023年第4期28卷 628-638页

作者： Lan Zhang Kejia Zhang Haiwei Pan College of Computer Science and Technology Harbin Engineering UniversityHarbin 150001China

As a deep learning network with an encoder-decoder architecture,UNet and its series of improved versions have been widely used in medical image segmentation with great ***,when used to segment targets in 3D medical images such as magnetic resonance imaging(MRI),computed tomography(CT),these models do not model the relevance of images in vertical space,resulting in poor accurate analysis of consecutive slices of the same *** the other hand,the large amount of detail lost during the encoding process makes these models incapable of segmenting small-scale tumor *** at the scene of small-scale target segmentation in 3D medical images,a fully new neural network model SUNet++is proposed on the basis of UNet and UNet++.SUNet++improves the existing models mainly in three aspects:1)the modeling strategy of slice superposition is used to thoroughly excavate the three dimensional information of the data;2)by adding an attention mechanism during the decoding process,small scale targets in the picture are retained and amplified;3)in the up-sampling process,the transposed convolution operation is used to further enhance the effect of the *** order to verify the effect of the model,we collected and produced a dataset of hyperintensity MRI liver-stage images containing over 400 cases of liver *** results on both public and proprietary datasets demonstrate the superiority of SUNet++in small-scale target segmentation of three-dimensional medical images.

关键词： 3D medical images small-scale target segmentation attention mechanism

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Deep learning-based software engineering: progress,challenges, and opportunities

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science China(Information sciences) 2025年第1期68卷 57-144页

作者： Xiangping CHEN Xing HU Yuan HUANG He JIANG Weixing JI Yanjie JIANG Yanyan JIANG Bo LIU Hui LIU Xiaochen LI Xiaoli LIAN Guozhu MENG Xin PENG Hailong SUN Lin SHI Bo WANG Chong WANG Jiayi WANG Tiantian WANG Jifeng XUAN Xin XIA Yibiao YANG Yixin YANG Li ZHANG Yuming ZHOU Lu ZHANG School of Journalism and Communication Sun Yat-sen University School of Software Technology Zhejiang University School of Software Engineering Sun Yat-sen University School of Software Dalian University of Technology School of Computer Science and Technology Beijing Institute of Technology Key Laboratory of High Confidence Software Technologies (Peking University) Ministry of EducationSchool of Computer Science Peking University State Key Laboratory for Novel Software Technology Nanjing University School of Computer Science and Engineering Beihang University Institute of Information Engineering Chinese Academy of Sciences School of Computer Science Fudan University State Key Laboratory of Complex & Critical Software Environment (CCSE) School of Software Beihang University School of Computer and Information Technology Beijing Jiaotong University School of Computer Science and Technology Harbin Institute of Technology School of Computer Science Wuhan University Huawei Technologies

Researchers have recently achieved significant advances in deep learning techniques, which in turn has substantially advanced other research disciplines, such as natural language processing, image processing, speech recognition, and software engineering. Various deep learning techniques have been successfully employed to facilitate software engineering tasks, including code generation, software refactoring, and fault localization. Many studies have also been presented in top conferences and journals, demonstrating the applications of deep learning techniques in resolving various software engineering tasks. However,although several surveys have provided overall pictures of the application of deep learning techniques in software engineering,they focus more on learning techniques, that is, what kind of deep learning techniques are employed and how deep models are trained or fine-tuned for software engineering tasks. We still lack surveys explaining the advances of subareas in software engineering driven by deep learning techniques, as well as challenges and opportunities in each subarea. To this end, in this study, we present the first task-oriented survey on deep learning-based software engineering. It covers twelve major software engineering subareas significantly impacted by deep learning techniques. Such subareas spread out through the whole lifecycle of software development and maintenance, including requirements engineering, software development, testing, maintenance, and developer collaboration. As we believe that deep learning may provide an opportunity to revolutionize the whole discipline of software engineering, providing one survey covering as many subareas as possible in software engineering can help future research push forward the frontier of deep learning-based software engineering more systematically. For each of the selected subareas,we highlight the major advances achieved by applying deep learning techniques with pointers to the available datasets i

关键词： deep learning software engineering software benchmark software artifact representation survey

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Rumor detection using dual embeddings and text-based graph convolutional network

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Discover Artificial Intelligence 2024年第1期4卷 1-15页

作者： Pattanaik, Barsha Mandal, Sourav Tripathy, Rudra M. Sekh, Arif Ahmed School of Computer Science and Engineering XIM University Odisha Bhubaneswar752050 India Department of Computer Science UiT The Arctic University Tromsø9017 Norway

Social media platforms like Twitter and Facebook have gradually become vital for communication and information exchange. However, this often leads to the spread of unreliable or false information, such as harmful rumors. Currently, graph convolutional networks (GCNs), particularly TextGCN, have shown promise in text classification tasks, including rumor detection. Their success is due to their ability to identify structural patterns in rumors and effectively use neighborhood information. We present a novel rumor detection model using TextGCN, which utilizes a word-document graph to represent rumor texts. This model uses dual embedding from two pre-trained transformer models: generative pre-trained transformers (GPT) and bidirectional encoder representations from transformers (BERT). These embeddings serve as node representations within the graph, enhancing rumor detection. Combining these deep neural networks effectively extracts significant contextual features from rumors. This graph undergoes convolution, and through graph-based learning, the model detects a rumor. We evaluated our model using publicly available rumor datasets, such as PHEME, Twitter15, and Twitter16. It achieved 88.64% accuracy on the PHEME dataset, surpassing similar models, and performed well on Twitter15 and Twitter16 with accuracies of 81.98% and 83.41%, respectively. © The Author(s) 2024.

关键词： Tweets

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An optimized deep network-based intermediate code generation for the mathematical expression

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Multimedia Tools and Applications 2024年第17期84卷 1-24页

作者： Sharada, H.N. Anami, Basavaraj Allagi, Shridhar Department of Computer Science & amp Engineering SDM College of Engineering and Technology Karnataka Dharwad580002 India Department of Computer Science & amp Engineering KLE Institute of Technology Karnataka Hubli580030 India

In recent times, the system's mathematical expression and operation have gained greater reach in engineering and mathematics. It is vital to solving more complex expressions and equations in a short time. The most existing methodology was degraded in the recognition performance and provided inaccurate output. Therefore, a novel Squirrel-based Spiking Neural Model (SbSNM) was presented for the intermediate code generation from the mathematical expression relation data. Initially, the input ME relation data was preprocessed to remove noise and tokenized by the spiking neural features. The tokenized expressions were arranged into a syntax tree structure, and then intermediate code was generated by the squirrel functions. Finally, the differentiation was calculated and given as output. Subsequently, the performance parameters were evaluated for the presented SbSNM. The overall accuracy obtained by the presented model is 99.25% which is higher than the other existing techniques and also brought a higher precision and recall rate and f1-score. © The Author(s), under exclusive licence to Springer science+Business Media, LLC, part of Springer Nature 2024.

关键词： Neural networks

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A Novel Optimized Deep Convolutional Neural Network for Efficient Seizure Stage Classification

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computers, Materials & Continua 2024年第12期81卷 3903-3926页

作者： Umapathi Krishnamoorthy Shanmugam Jagan Mohammed Zakariah Abdulaziz S.Almazyad K.Gurunathan Department of Biomedical Engineering KIT-Kalaignarkarunanidhi Institute of TechnologyCoimbatore641402India Department of Computer Sciences and Engineering Vel Tech Rangarajan Dr.Sagunthala R&D Institute of Science and TechnologyChennai600062India Department of Computer Sciences and Engineering College of Applied ScienceKing Saud UniversityRiyadh11543Saudi Arabia Department of Computer Engineering College of Computer and Information SciencesKing Saud UniversityRiyadh11543Saudi Arabia Department of Computer Science and Engineering Mount Zion College of Engineering and TechnologyPudukkottai622507India

Brain signal analysis from electroencephalogram(EEG)recordings is the gold standard for diagnosing various neural disorders especially epileptic *** signals are highly chaotic compared to normal brain signals and thus can be identified from EEG *** the current seizure detection and classification landscape,most models primarily focus on binary classification—distinguishing between seizure and non-seizure *** effective for basic detection,these models fail to address the nuanced stages of seizures and the intervals between *** identification of per-seizure or interictal stages and the timing between seizures is crucial for an effective seizure alert *** granularity is essential for improving patient-specific interventions and developing proactive seizure management *** study addresses this gap by proposing a novel AI-based approach for seizure stage classification using a Deep Convolutional Neural Network(DCNN).The developed model goes beyond traditional binary classification by categorizing EEG recordings into three distinct classes,thus providing a more detailed analysis of seizure *** enhance the model’s performance,we have optimized the DCNN using two advanced techniques:the Stochastic Gradient Algorithm(SGA)and the evolutionary Genetic Algorithm(GA).These optimization strategies are designed to fine-tune the model’s accuracy and ***,k-fold cross-validation ensures the model’s reliability and generalizability across different data *** and validated on the Bonn EEG data sets,the proposed optimized DCNN model achieved a test accuracy of 93.2%,demonstrating its ability to accurately classify EEG *** summary,the key advancement of the present research lies in addressing the limitations of existing models by providing a more detailed seizure classification system,thus potentially enhancing the effectiveness of real-time seizure prediction and management systems in clinic

关键词： Bonn EEG dataset cross-validation genetic algorithm batch normalization seizure classification stochastic gradient

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A Semi-Tensor Product Based All Solutions Boolean Satisfiability Solver

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Journal of computer science & Technology 2023年第3期38卷 702-713页

作者：潘鸿洋储飞 Faculty of Electrical Engineering and Computer Science Ningbo UniversityNingbo 315211China

Boolean satisfiability (SAT) is widely used as a solver engine in electronic design automation (EDA). Typically, SAT is used to determine whether one or more groups of variables can be combined to form a true formula. All solutions SAT (AllSAT) is a variant of the SAT problem. In the fields of formal verification and pattern generation, AllSAT is particularly useful because it efficiently enumerates all possible solutions. In this paper, a semi-tensor product (STP) based AllSAT solver is proposed. The solver can solve instances described in both the conjunctive normal form (CNF) and circuit form. The implementation of our method differs from incremental enumeration because we do not add blocking conditions for existing solutions, but rather compute the matrices to obtain all the solutions in one pass. Additionally, the logical matrices support a variety of logic operations. Results from experiments with MCNC benchmarks using CNF-based and circuit-based forms show that our method can accelerate CPU time by 8.1x (238x maximum) and 19.9x (72x maximum), respectively.

关键词： all solutions Boolean satisfiability(AllSAT) semi-tensor product of matrices conjunctive normal form(CNF)satisfiability circuit satisfiability

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