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1st Indonesian Association for Pattern Recognition International Conference, INAPR 2018

作者： Assiroj, Priati Hananto, April Lia Fauzi, Ahmad Hendric Spits Warnars, Harco Leslie Computer Science Department BINUS Graduate Program - Doctor of Computer Science Bina Nusantara University Jakarta11480 Indonesia Faculty of Computing Universiti Teknologi Malaysia Skudai Johor Malaysia Information System Faculty of Technology and Computer Science United States Buana Perjuangan University Faculty of Technology and Computer Science Information Technology Karawang Indonesia

ISBN: (纸本)9781538694220

To maintain excellence in global hyper-competitive economies in the upcoming decades, manufacturers must improve the design, development, and distribution of subsequent product generations, production technologies, equipment, and processes. High-performance computing (HPC) solves the application of significant challenges using computer modeling, simulation, and analytical technology. By using HPC technology, products design will be faster, making and testing prototypes will save time, the production process can be simplified, the cost of innovation will decrease, and high-value innovation will be quickly developed. This study uses the PRISMA method, based on predetermined keywords and analyzes the algorithms, frameworks and programming languages and the processes that are most commonly used to optimize the Graphics Processing Unit (GPU). The results of this study can be a reference for future research on the implementation of High-Performance computing (HPC) Application by combine modeling, simulation, and analysis. © 2018 IEEE.

关键词： Graphics processing unit

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Correction: Characterizing country-specific human and ecosystem health impact and damage cost of agricultural pesticides: the case for Thailand

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The International Journal of Life Cycle Assessment 2022年第12期27卷 1377-1377页

作者： Mankong, Phatchari Fantke, Peter Phenrat, Tanapon Mungkalasiri, Jitti Gheewala, Shabbir H. Prapaspongsa, Trakarn Graduate Program in Environmental and Water Resources Engineering Department of Civil and Environmental Engineering Faculty of Engineering Mahidol University Nakhon Pathom Thailand Quantitative Sustainability Assessment Department of Environmental and Resource Engineering Technical University of Denmark Kongens Lyngby Denmark Department of Civil Engineering Faculty of Engineering Naresuan University Phitsanulok Thailand Technology and Informatics Institute for Sustainability (TIIS) National Metal and Materials Technology Center (MTEC) National Science and Technology Development Agency (NSTDA) Pathum Thani Thailand The Joint Graduate School of Energy and Environment (JGSEE) King Mongkut’s University of Technology Thonburi Bangkok Thailand Centre of Excellence On Energy Technology and Environment Ministry of Higher Education Science Research and Innovation Bangkok Thailand

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Performance Analysis of a Modified Conjugate Gradient Algorithm for Optimization Models

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IOP Conference Series: Materials science and Engineering 2021年第1期1115卷

作者： S E Olowo I M Sulaiman M Mamat A E Owoyemi M A Zaini Kalfin S H Yuningsih Department of Mathematics Kano University of science and Technology Kano Nigeria Faculty of Informatics and Computing Universiti Sultan Zainal Abidin Campus Kuala Nerus 22200 Terengganu Malaysia Department of General Studies. Federal College of Agricultural Produce Technology Kano Nigeria Institute of Engineering Mathematics Universiti Malaysia Perlis Kangar Malaysia Doctor Program of Mathematics Faculty of Mathematics and Natural Sciences Universitas Padjadjaran Indonesia Master Program of Mathematics Faculty of Mathematics and Natural Sciences Universitas Padjadjaran Indonesia

The Conjugate gradient (CG) algorithms is very important and widely used in solving optimization models. This is due to its simplicity as well as global convergence properties. Various line search procedures as usually employ in the analysis of the CG methods. Recently, many studies have been done aimed at improving the CG method. In this paper, an alternative formula for conjugate gradient coefficient has been proposed which possesses the global convergence properties under exact minimization condition. The result of the numerical computation has shown that this new coefficient performs better than the existing CG methods.

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A Robust Ensemble Algorithm for Ischemic Stroke Lesion Segmentation: Generalizability and Clinical Utility Beyond the ISLES Challenge

arXiv

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arXiv 2024年

作者： de la Rosa, Ezequiel Reyes, Mauricio Liew, Sook-Lei Hutton, Alexandre Wiest, Roland Kaesmacher, Johannes Hanning, Uta Hakim, Arsany Zubal, Richard Valenzuela, Waldo Robben, David Sima, Diana M. Anania, Vincenzo Brys, Arne Meakin, James A. Mickan, Anne Broocks, Gabriel Heitkamp, Christian Gao, Shengbo Liang, Kongming Zhang, Ziji Siddiquee, Md Mahfuzur Rahman Myronenko, Andriy Ashtari, Pooya Van Huffel, Sabine Jeong, Hyun-Su Yoon, Chi-Ho Kim, Chulhong Huo, Jiayu Ourselin, Sebastien Sparks, Rachel Clèrigues, Albert Oliver, Arnau Lladó, Xavier Chalcroft, Liam Pappas, Ioannis Bertels, Jeroen Heylen, Ewout Moreau, Juliette Hatami, Nima Frindel, Carole Qayyum, Abdul Mazher, Moona Puig, Domenec Lin, Shao-Chieh Juan, Chun-Jung Hu, Tianxi Boone, Lyndon Goubran, Maged Liu, Yi-Jui Wegener, Susanne Kofler, Florian Ezhov, Ivan Shit, Suprosanna Hernandez Petzsche, Moritz R. Menze, Bjoern Kirschke, Jan S. Wiestler, Benedikt Department of Quantitative Biomedicine University of Zurich Zurich Switzerland Department of Informatics Technical University Munich Germany Icometrix Leuven Belgium ARTORG Center for Biomedical Research University of Bern Bern Switzerland Department of Radiation Oncology University Hospital Bern University of Bern Switzerland University of Bern Bern Switzerland Chan Division of Occupational Science and Occupational Therapy University of Southern California Los AngelesCA United States Stevens Neuroimaging and Informatics Institute Department of Neurology Keck School of Medicine University of Southern California United States University Institute of Diagnostic and Interventional Neuroradiology Inselspital Bern Switzerland University Institute of Diagnostic and Interventional Neuroradiology University Hospital Bern Inselspital University of Bern Bern Switzerland Department of Diagnostic and Interventional neuroradiology University Medical Center Hamburg-Eppendorf Hamburg Germany Department of Medical Imaging Radboud University Medical Center Institute for Health Sciences Nijmegen Netherlands Deepwise AI Lab Beijing China Beijing University of Posts and Telecommunications Bejing China School of Computing and Augmented Intelligence Arizona State University TempeAZ United States NVIDIA Santa ClaraCA United States STADIUS Center for Dynamical Systems Signal Processing and Data Analytics KU Leuven Leuven Belgium Pohang Korea Republic of School of Biomedical Engineering & Imaging Sciences King’s College London United Kingdom Institute of Computer Vision and Robotics University of Girona Spain Wellcome Centre for Human Neuroimaging University College London London United Kingdom Laboratory of Neuro Imaging Stevens Institute for Neuroimaging and Informatics Keck School of Medicine University of Southern California Los Angeles United States KU Leuven Leuven Belgium CREATIS Université Lyon1 CNRS UMR5220 INSERM U1206 INSA-Lyon Villeurbanne696

Diffusion-weighted MRI (DWI) is essential for stroke diagnosis, treatment decisions, and prognosis. However, image and disease variability hinder the development of generalizable AI algorithms with clinical value. We address this gap by presenting a novel ensemble algorithm derived from the 2022 Ischemic Stroke Lesion Segmentation (ISLES) challenge. ISLES’22 provided 400 patient scans with ischemic stroke from various medical centers, facilitating the development of a wide range of cutting-edge segmentation algorithms by the research community. By assessing them against a hidden test set, we identified strengths, weaknesses, and potential biases. Through collaboration with leading teams, we combined top-performing algorithms into an ensemble model that overcomes the limitations of individual solutions. Our ensemble model combines the individual algorithms’ strengths and achieved superior ischemic lesion detection and segmentation accuracy (median Dice score: 0.82, median lesion-wise F1 score: 0.86) on our internal test set compared to individual algorithms. This accuracy generalized well across diverse image and disease variables. Furthermore, the model excelled in extracting clinical biomarkers like lesion types and affected vascular territories. Notably, in a Turing-like test, neuroradiologists consistently preferred the algorithm’s segmentations over manual expert efforts, highlighting increased comprehensiveness and precision. Validation using a real-world external dataset (N=1686) confirmed the model’s generalizability (median Dice score: 0.82, median lesion-wise F1 score: 0.86). The algorithm’s outputs also demonstrated strong correlations with clinical scores (admission NIHSS and 90-day mRS) on par with or exceeding expert-derived results, underlining its clinical relevance. This study offers two key findings. First, we present an ensemble algorithm that detects and segments ischemic stroke lesions on DWI across diverse scenarios on par with expert (neuro)rad

关键词： Diagnosis

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Community-based intervention in reducing flood impacts in Gambia

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IOP Conference Series: Earth and Environmental science 2021年第1期711卷

作者： A Jonga E Meilianda Nizamuddin Graduate Program School of Disaster Science Universitas Syiah Kuala Banda Aceh 23111 Indonesia Tsunami and Disaster Mitigation Research Centre (TDMRC) Universitas Syiah Kuala Banda Aceh 23111 Indonesia Civil Engineering Department Engineering Faculty Universitas Syiah Kuala Banda Aceh 23111 Indonesia Informatics Department Mathematics and Natural Science Faculty Universitas Syiah Kuala Banda Aceh 23111 Indonesia

Flood has caused significant damage to the agricultural sector, which results in low productivity and causes famine in Kaba-kama community of Basse in the Upper river region of the Gambia. This study analyses the potential role of the community's mitigation efforts to reduce the flood impact in the Gambia. The objective is to determine the influence of community-based intervention activities in reducing the flood impact at the community level. The primary data are obtained in this study from own previous experience by participating in the community work ('Te-setto') to mitigate the impact of flood, and interviews in a form of questionnaires to the members of the VDC in Kaba-kama community. Literature reviews from journals, books, and the final report about the disaster in 2018 by NDMA has served as a secondary source of data for the study. Notifiable, the community-based organization (Village Development Committee -VDC), is the key pioneer of the initiative. This study exemplifies the successful collective efforts by the communities and government in different regions and the country at large in practicing flood adaptive and mitigation strategies, which has potential to be implemented elsewhere in other famine-prone countries in the world.

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Prototype Selection Using Self-Organizing-Maps and Entropy for Overlapped Classes and Imbalanced Data

Prototype Selection Using Self-Organizing-Maps and Entropy f...

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International Joint Conference on Neural Networks

作者： Marcio Rubbo Leandro A. Silva Graduate Program in Electrical Engineering and Computing Mackenzie Presbyterian University Sao Paulo SP Brazil Computing and Informatics Faculty & Graduate Program in Electrical Engineering and Computing Mackenzie Presbyterian University Sao Paulo SP Brazil

The k nearest neighbor (kNN) is a traditional supervised classifier used in data mining tasks. However, when used in real applications, mainly in a dataset with class imbalance or class overlap, kNN suffers with problems in accuracy performance. In this paper, we propose three prototype selection methods using self-organizing maps (SOM) and information entropy to increase the effectiveness of the kNN classifier in datasets with these conditions. The methods, named SOMEntropyKnn, were able to increase the effectiveness of the kNN classifier in all the 14 datasets used in the experiment, increasing the accuracy performance from datasets with imbalance or overlap problems.

关键词： Prototypes Entropy Self-organizing feature maps Neurons Training Information entropy Electrical engineering

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Web Application Vulnerability Detection Using Taint Analysis and Black-box Testing

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IOP Conference Series: Materials science and Engineering 2020年第1期879卷

作者： Heribertus Yulianton Agung Trisetyarso Wayan Suparta Bahtiar Saleh Abbas Chul Ho Kang Computer Science Department Binus Graduate Program | Doctor of Computer Science Bina Nusantara University West Jakarta Indonesia Faculty of Information Technology Universitas Stikubank Semarang Department of Informatics Universitas Pembangunan Jaya

Web applications continue to grow however web attacks are also increasing, this shows an increase in web application vulnerabilities. Several methods have been used to detect vulnerabilities in web applications such as black-box testing, dynamic analysis, and static analysis. In this article, we propose a framework for detecting web application vulnerabilities by combining all three methods. The strengths of one method are used to overcome the weaknesses of another method. This framework is believed to provide better results than if each method was used separately.

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Detecting anomalous citation groups in journal networks

arXiv

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arXiv 2020年

作者： Kojaku, Sadamori Livan, Giacomo Masuda, Naoki Luddy School of Informatics Computing and Engineering Indiana University BloomingtonIN47408 United States Department of Computer Science University College London LondonWC1E 6EA United Kingdom Systemic Risk Centre London School of Economics and Political Science LondonWC2A 2AE United Kingdom Department of Mathematics University at Buffalo State University of New York BuffaloNY United States Computational and Data-Enabled Science and Engineering Program University at Buffalo State University of New York BuffaloNY14260-2900 United States Faculty of Science and Engineering Waseda University Tokyo169-8555 Japan

The ever-increasing competitiveness in the academic publishing market incentivizes journal editors to pursue higher impact factors. This translates into journals becoming more selective, and, ultimately, into higher publication standards. However, the fixation on higher impact factors leads some journals to artificially boost impact factors through the coordinated effort of a "citation cartel" of journals. "Citation cartel" behavior has become increasingly common in recent years, with several instances being reported. Here, we propose an algorithm—-named CIDRE—to detect anomalous groups of journals that exchange citations at excessively high rates when compared against a null model that accounts for scientific communities and journal size. CIDRE detects more than half of the journals suspended from Journal Citation Reports due to anomalous citation behavior in the year of suspension or in advance. Furthermore, CIDRE detects many new anomalous groups, where the impact factors of the member journals are lifted substantially higher by the citations from other member journals. We describe a number of such examples in detail and discuss the implications of our findings with regard to the current academic climate. Copyright © 2020, The Authors. All rights reserved.

关键词： Publishing

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Genome-wide association study −Driven drug repositioning for the treatment of insomnia

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Journal of Genetic Engineering and Biotechnology 2025年第2期23卷 100502页

作者： Satria, Rahmat Dani Adikusuma, Wirawan Sukorini, Usi Avitasari, Devy Eka Kusuma Harahap, Indra Sari Setia Lesmana, Mohammad Hendra Irham, Lalu Muhammad Fatimah Harahap, Nur Imma Rinastiti, Pranindya Wardhana, Donytra Arby Prabasaktya, Richardus Wisnandito Lin, Chiou-Feng Paramitasari, Aprilia Kusumadewi, Andrian Fajar Department of Clinical Pathology and Laboratory Medicine Faculty of Medicine Public Health and Nursing Universitas Gadjah Mada Yogyakarta 55281 Indonesia Integrated Laboratory Installation Dr Sardjito General Hospital Yogyakarta 55281 Indonesia Research Center for Computing Research Organization for Electronics and Informatics National Research and Innovation Agency (BRIN) Cibinong 16911 Indonesia Department of Pharmacy University of Muhammadiyah Mataram Mataram 83127 Indonesia Clinical Neurophysiology and Neuromuscular Division Department of Neurology Faculty of Medicine Public Health and Nursing Universitas Gadjah Mada - Dr Sardjito General Hospital Yogyakarta 55281 Indonesia Department of Nursing Faculty of Medicine Public Health and Nursing Universitas Gadjah Mada Yogyakarta 55281 Indonesia Faculty of Pharmacy Ahmad Dahlan University Yogyakarta Indonesia Integrated Clinical Laboratory Installation Universitas Gadjah Mada Academic Hospital Yogyakarta 55291 Indonesia Department of Microbiology and Immunology School of Medicine College of Medicine Taipei Medical University Taipei Taiwan Graduate Institute of Medical Sciences Taipei Medical University Taipei Taiwan International Ph.D. Program in Cell Therapy and Regenerative Medicine College of Medicine Taipei Medical University Taipei Taiwan Department of Psychiatry Faculty of Medicine Public Health and Nursing Universitas Gadjah Mada Yogyakarta 55281 Indonesia

Insomnia is a prevalent sleep disorder characterized by difficulty initiating or maintaining sleep, leading to severe health complications, increased mortality, and substantial socioeconomic burdens. Despite therapeutic advancements, effective pharmacological interventions remain limited, necessitating alternative approaches for drug discovery. This study aimed to identify potential therapeutic targets for insomnia by integrating gene network analysis, genomic data, and bioinformatics-driven drug repurposing strategies, aligning with the United Nations’ Sustainable Development Goal (SDG) 3: Good Health and Well-being. Insomnia-associated Single Nucleotide Polymorphisms (SNPs) were retrieved from the GWAS catalog, yielding 3,952 loci. Insomnia risk genes were identified by linking these loci to proximal SNPs (r² ≥ 0.8) in Asian populations using HaploReg v4.2, resulting in 1,765 candidate genes. A bioinformatics pipeline incorporating ten functional annotations and drug-gene interaction was employed to prioritize gene targets and identify novel repurposed drugs with potential biological relevance to insomnia. Drug-Gene Interaction Database (DGIdb) analysis identified seven druggable targets among 27 biologically significant insomnia risk genes, corresponding to 12 existing drugs. Notably, NRXN1 emerged as a highly promising target due to its strong functional annotation score and its known interaction with Duloxetine hydrochloride and nicotine polacrilex. This study underscores the potential of bioinformatics-driven gene network analysis in identifying drug repurposing candidates for insomnia. Further experimental validation is warranted to elucidate the therapeutic mechanisms of NRXN1 modulation in insomnia treatment. © 2025 The Author(s)

关键词： Bioinformatics Drug Repurposing GWAS Insomnia NRXN1

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Assessing Trustworthy AI in Times of COVID-19: Deep Learning for Predicting a Multiregional Score Conveying the Degree of Lung Compromise in COVID-19 Patients

IEEE Transactions on Technology and Society

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IEEE Transactions on Technology and Society 2022年第4期3卷 272-289页

作者： Allahabadi, Himanshi Amann, Julia Balot, Isabelle Beretta, Andrea Binkley, Charles Bozenhard, Jonas Bruneault, Frederick Brusseau, James Candemir, Sema Cappellini, Luca Alessandro Chakraborty, Subrata Cherciu, Nicoleta Cociancig, Christina Coffee, Megan Ek, Irene Espinosa-Leal, Leonardo Farina, Davide Fieux-Castagnet, Genevieve Frauenfelder, Thomas Gallucci, Alessio Giuliani, Guya Golda, Adam Van Halem, Irmhild Hildt, Elisabeth Holm, Sune Kararigas, Georgios Krier, Sebastien A. Kuhne, Ulrich Lizzi, Francesca Madai, Vince I. Markus, Aniek F. Masis, Serg Mathez, Emilie Wiinblad Mureddu, Francesco Neri, Emanuele Osika, Walter Ozols, Matiss Panigutti, Cecilia Parent, Brendan Pratesi, Francesca Moreno-Sanchez, Pedro A. Sartor, Giovanni Savardi, Mattia Signoroni, Alberto Sormunen, Hanna-Maria Spezzatti, Andy Srivastava, Adarsh Stephansen, Annette F. Theng, Lau Bee Tithi, Jesmin Jahan Tuominen, Jarno Umbrello, Steven Vaccher, Filippo Vetter, Dennis Westerlund, Magnus Wurth, Renee Zicari, Roberto V. Ey Netherlands Enterprise Intelligence Department Amsterdam1083 HP Netherlands Eth Zurich Health Ethics and Policy Lab Department of Health Sciences and Technology Zürich8092 Switzerland Center for Diplomatic and Strategic Studies Postgraduate Studies in Diplomacy and International Relations Paris75015 France Pisa56124 Italy Hackensack Meridian Health Bioethics Center EdisonNJ08820 United States University of Oxford Faculty of Philosophy OxfordOX2 6GG United Kingdom Collège André- Laurendeau Philosophie Department MontrealQCH8N 2J4 Canada Université du Québec À Montréal École des Médias MontrealQCH2L 2C4 Canada Pace University Philosophy Department New YorkNY10038 United States The Ohio State University Wexner Medical Center Department of Radiology ColumbusOH43210 United States Humanitas Research Hospital Department of Radiology Milan20089 Italy Humanitas University Department of Biomedical Sciences Milan20089 Italy University of New England Faculty of Science Agriculture Business and Law ArmidaleNSW2351 Australia University of Technology Sydney Faculty of Engineering and Information Technology SydneyNSW2007 Australia Scuola Superiore Sant'Anna European Centre of Excellence on the Regulation of Robotics and Ai Pisa56127 Italy University of Bremen Group of Computer Architecture Bremen28359 Germany New York University Grossman School of Medicine Division of Infectious Diseases and Immunology Department of Medicine New YorkNY10016 United States Digital Institute Ai Research Section Stockholm16731 Sweden Arcada University of Applied Sciences Department of Business Management and Analytics Helsinki00550 Finland University of Brescia Radiological Sciences and Public Health Department of Medical and Surgical Specialties Brescia25121 Italy Sncf Reseau Sa Ethique Groupe La Plaine93418 France Institute of Diagnostic and Interventional Radiology University Hospital Zurich Zürich8091 Switzerland Eindhoven University of Tech

This article's main contributions are twofold: 1) to demonstrate how to apply the general European Union's High-Level Expert Group's (EU HLEG) guidelines for trustworthy AI in practice for the domain of healthcare and 2) to investigate the research question of what does 'trustworthy AI' mean at the time of the COVID-19 pandemic. To this end, we present the results of a post-hoc self-assessment to evaluate the trustworthiness of an AI system for predicting a multiregional score conveying the degree of lung compromise in COVID-19 patients, developed and verified by an interdisciplinary team with members from academia, public hospitals, and industry in time of pandemic. The AI system aims to help radiologists to estimate and communicate the severity of damage in a patient's lung from Chest X-rays. It has been experimentally deployed in the radiology department of the ASST Spedali Civili clinic in Brescia, Italy, since December 2020 during pandemic time. The methodology we have applied for our post-hoc assessment, called Z-Inspection®, uses sociotechnical scenarios to identify ethical, technical, and domain-specific issues in the use of the AI system in the context of the pandemic. © 2020 IEEE.

关键词： COVID-19

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