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Sentence Bag Graph Formulation for Biomedical Distant Supervision Relation Extraction

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arXiv 2023年

作者： Zhang, Hao Liu, Yang Liu, Xiaoyan Liang, Tianming Sharma, Gaurav Xue, Liang Guo, Maozu The School of Computer Science and Technology Harbin Institute of Technology Harbin150001 China The Department of Electrical and Computer Engineering University of Rochester RochesterNY14627 United States The *** HangZhou 310000 China The School of Electrical and Information Engineering Beijing University of Civil Engineering and Architecture Beijing100044 China The Beijing Key Laboratory of Intelligent Processing for Building Big Data Beijing University of Civil Engineering and Architecture Beijing100044 China

We introduce a novel graph-based framework for alleviating key challenges in distantly-supervised relation extraction and demonstrate its effectiveness in the challenging and important domain of biomedical data. Specifically, we propose a graph view of sentence bags referring to an entity pair, which enables message-passing based aggregation of information related to the entity pair over the sentence bag. The proposed framework alleviates the common problem of noisy labeling in distantly supervised relation extraction and also effectively incorporates inter-dependencies between sentences within a bag. Extensive experiments on two large-scale biomedical relation datasets and the widely utilized NYT dataset demonstrate that our proposed framework significantly outperforms the state-of-the-art methods for biomedical distant supervision relation extraction while also providing excellent performance for relation extraction in the general text mining domain. Copyright © 2023, The Authors. All rights reserved.

关键词： Message passing

Automatic Deep Active Contour Model Based on Local Image Characteristics

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Automatic Deep Active Contour Model Based on Local Image Cha...

IEEE International Conference on Systems, Man and Cybernetics

作者： Haijun You Kai Li Junying Chen Key Laboratory of Big Data and Intelligent Robot (SCUT) Ministry of Education School of Software Engineering South China University of Technology Guangzhou China Department of Ultrasound Third Affiliated Hospital of Sun Yat-sen University Guangzhou China

In recent years, convolutional neural networks have made remarkable achievements in medical image segmentation. Unclear margins and fuzzy boundary regions are formed surrounding the thyroid gland area under the influence of artifacts and speckles, which increases the difficulty of thyroid ultrasound image segmentation. However, building an effective CNN model usually requires massive computing resources, long training time, and large amounts of carefully labeled data. In this work, we develop a fast, compact, accurate and robust image segmentation model for automatic thyroid segmentation in medical ultrasound images. We propose an automatic deep active contour (DAC) model based on local image characteristics, which utilizes the deep neural network model to obtain the initial contour and constructs external energy items based on the local image characteristics of contour points. Compared with the deep neural network model, the DAC model requires less training data, and the segmentation performance of the DAC model on a small dataset can reach that of the deep neural network model on a larger dataset. The proposed DAC model can be used for automatic thyroid segmentation in medical ultrasound images, which does not require massive computing resources, long training time, and large amounts of carefully labeled data.

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Block-Structured Optimization for Subgraph Detection in Interdependent Networks

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arXiv 2022年

作者： Jie, Fei Wang, Chunpai Chen, Feng Li, Lei Wu, Xindong Key Laboratory of Knowledge Engineering with Big Data Hefei University of Technology Ministry of Education Hefei China School of Computer Science and Information Engineering Hefei University of Technology Hefei China Department of Computer Science University at Albany – SUNY AlbanyNY United States Erik Jonsson School of Engineering & Computer Science The University of Texas at Dallas DallasTX United States Mininglamp Academy of Sciences Mininglamp Technologies Beijing China Institute of Big Knowledge Science Hefei University of Technology Hefei China

We propose a generalized framework for block-structured nonconvex optimization, which can be applied to structured subgraph detection in interdependent networks, such as multi-layer networks, temporal networks, networks of networks, and many others. Specifically, we design an effective, efficient, and parallelizable projection algorithm, namely Graph Block-structured Gradient Projection (GBGP), to optimize a general non-linear function subject to graph-structured constraints. We prove that our algorithm: 1) runs in nearly-linear time on the network size;2) enjoys a theoretical approximation guarantee. Moreover, we demonstrate how our framework can be applied to two very practical applications and conduct comprehensive experiments to show the effectiveness and efficiency of our proposed algorithm. Copyright © 2022, The Authors. All rights reserved.

关键词： Functions

Dark-state solution and symmetries of the two-qubit multimode asymmetric quantum Rabi model

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arXiv 2023年

作者： Lei, Ze-Feng Tian, Junlong Peng, Jie Hunan Key Laboratory for Micro-Nano Energy Materials and Devices School of Physics and Optoelectronics Xiangtan University Hunan411105 China Department of Electronic Science College of Big Data and Information Engineering Guizhou University Guiyang550025 China

We study the two-qubit asymmetric quantum Rabi model (AQRM) and find its dark-state solution. Such solutions have at most one photon and constant eigenenergy in the whole coupling regime, causing level crossings in the spectrum, although there is no explicit conserved quantity except energy. We find an operator in the eigenenergy basis to label all the degeneracies with its eigenvalues, and compare it with the well-known hidden symmetry which exists when bias parameter ϵ is a multiple of half of the resonator frequency ω. Extended to the multimode case, we find symmetries related with conserved bosonic number operators, which also cause level crossings. This provides a perspective for symmetry studies on generalized Rabi models. © 2023, CC BY.

关键词： Eigenvalues and eigenfunctions

Why Does Little Robustness Help? A Further Step Towards Understanding Adversarial Transferability

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arXiv 2023年

作者： Zhang, Yechao Hu, Shengshan Zhang, Leo Yu Shi, Junyu Li, Minghui Liu, Xiaogeng Wan, Wei Jin, Hai School of Cyber Science and Engineering Huazhong University of Science and Technology China School of Software Engineering Huazhong University of Science and Technology China School of Information and Communication Technology Griffith University Australia School of Computer Science and Technology Huazhong University of Science and Technology China National Engineering Research Center for Big Data Technology and System Services Computing Technology and System Lab Hubei Key Laboratory of Distributed System Security China Hubei Engineering Research Center on Big Data Security China Cluster and Grid Computing Lab

Adversarial examples for deep neural networks (DNNs) have been shown to be transferable: examples that successfully fool one white-box surrogate model can also deceive other black-box models with different architectures. Although a bunch of empirical studies have provided guidance on generating highly transferable adversarial examples, many of these findings fail to be well explained and even lead to confusing or inconsistent advice for practical use. In this paper, we take a further step towards understanding adversarial transferability, with a particular focus on surrogate aspects. Starting from the intriguing "little robustness" phenomenon, where models adversarially trained with mildly perturbed adversarial samples can serve as better surrogates for transfer attacks, we attribute it to a trade-off between two dominant factors: model smoothness and gradient similarity. Our research focuses on their joint effects on transferability, rather than demonstrating the separate relationships alone. Through a combination of theoretical and empirical analyses, we hypothesize that the data distribution shift induced by off-manifold samples in adversarial training is the reason that impairs gradient similarity. Building on these insights, we further explore the impacts of prevalent data augmentation and gradient regularization on transferability and analyze how the trade-off manifest in various training methods, thus building a comprehensive blueprint for the regulation mechanisms behind transferability. Finally, we provide a general route for constructing superior surrogates to boost transferability, which optimizes both model smoothness and gradient similarity simultaneously, e.g., the combination of input gradient regularization and sharpness-aware minimization (SAM), validated by extensive experiments. In summary, we call for attention to the united impacts of these two factors for launching effective transfer attacks, rather than optimizing one while ignoring the other,

关键词： Deep neural networks

Vulnerability Detection with Graph Simplification and Enhanced Graph Representation Learning

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Vulnerability Detection with Graph Simplification and Enhanc...

International Conference on Software engineering (ICSE)

作者： Xin-Cheng Wen Yupan Chen Cuiyun Gao Hongyu Zhang Jie M. Zhang Qing Liao School of Computer Science and Technology Harbin Institute of Technology Shenzhen China Peng Cheng Laboratory and Guangdong Provincial Key Laboratory Novel Security Intelligence Technologies School of Big Data and Software Engineering Chongqing University China Department of Informatics King's College London UK Peng Cheng Laboratory

Prior studies have demonstrated the effectiveness of Deep Learning (DL) in automated software vulnerability detection. Graph Neural Networks (GNNs) have proven effective in learning the graph representations of source code and are commonly adopted by existing DL-based vulnerability detection methods. However, the existing methods are still limited by the fact that GNNs are essentially difficult to handle the connections between long-distance nodes in a code structure graph. Besides, they do not well exploit the multiple types of edges in a code structure graph (such as edges representing data flow and control flow). Consequently, despite achieving state-of-the-art performance, the existing GNN-based methods tend to fail to capture global information (i.e., long-range dependencies among nodes) of code graphs. To mitigate these issues, in this paper, we propose a novel vulnerability detection framework with grAph siMplification and enhanced graph rePresentation LEarning, named AMPLE. AMPLE mainly contains two parts: 1) graph simplification, which aims at reducing the distances between nodes by shrinking the node sizes of code structure graphs; 2) enhanced graph representation learning, which involves one edge-aware graph convolutional network module for fusing heterogeneous edge information into node representations and one kernel-scaled representation module for well capturing the relations between distant graph nodes. Experiments on three public benchmark datasets show that AMPLE outperforms the state-of-the-art methods by 0.39%-35.32% and 7.64%-199.81% with respect to the accuracy and F1 score metrics, respectively. The results demonstrate the effectiveness of AMPLE in learning global information of code graphs for vulnerability detection.

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A Framework for Autonomous Vehicle Testing Using Semantic Models

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A Framework for Autonomous Vehicle Testing Using Semantic Mo...

IEEE International Conference on Artificial Intelligence Testing (AITest)

作者： Yejun He Muslim Razi Jerry Gao Chuanqi Tao Ministry Key Laboratory for Safety-Critical Software Development and Verification Nanjing University of Aeronautics and Astronautics Nanjing Jiangsu China Computer Engineering Department and Applied Data Science Department San Jose State University San Jose USA

With the rapid development of big data and artificial intelligence, autonomous vehicles (AV) have achieved great success in diverse application domains. Although the current development of autonomous driving technology has been greatly improved, the accident rate of driverless vehicles still rises. Therefore, how to ensure the quality of AVs using different testing technologies has become an important issue. Traditional testing approaches such as decision tables and state charts struggle with diversified test inputs. Hence, there is a strong demand for new test models for AV testing. In this paper, we present a model-based testing framework that utilizes semantic trees and 3-dimensional (3D) test tables to model driving scenarios into individual test cases. Using the proposed framework, we generate fine-grained examples corresponding to the real world. Also, we evaluate the behavior of the Apollo AV system in 30 scenarios in SVL simulator. The results show that the scenarios generated by our framework can cover most conditions occurring, thus addressing the challenge of testing AVs for safety and reliability.

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FaceBench: A Multi-View Multi-Level Facial Attribute VQA dataset for Benchmarking Face Perception MLLMs

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arXiv 2025年

作者： Wang, Xiaoqin Ma, Xusen Hou, Xianxu Ding, Meidan Li, Yudong Chen, Junliang Chen, Wenting Peng, Xiaoyang Shen, Linlin Computer Vision Institute College of Computer Science and Software Engineering Shenzhen University China National Engineering Laboratory for Big Data System Computing Technology Shenzhen University China Guangdong Provincial Key Laboratory of Intelligent Information Processing China AIAC Xi’an Jiaotong-Liverpool University China Tsinghua University China The Hong Kong Polytechnic University Hong Kong City University of Hong Kong Hong Kong Sun Yat-sen University China

Multimodal large language models (MLLMs) have demonstrated remarkable capabilities in various tasks. However, effectively evaluating these MLLMs on face perception remains largely unexplored. To address this gap, we introduce FaceBench, a dataset featuring hierarchical multi-view and multi-level attributes specifically designed to assess the comprehensive face perception abilities of MLLMs. Initially, we construct a hierarchical facial attribute structure, which encompasses five views with up to three levels of attributes, totaling over 210 attributes and 700 attribute values. Based on the structure, the proposed FaceBench consists of 49,919 visual question-answering (VQA) pairs for evaluation and 23,841 pairs for fine-tuning. Moreover, we further develop a robust face perception MLLM baseline, Face-LLaVA, by training with our proposed face VQA data. Extensive experiments on various mainstream MLLMs and Face-LLaVA are conducted to test their face perception ability, with results also compared against human performance. The results reveal that, the existing MLLMs are far from satisfactory in understanding the fine-grained facial attributes, while our Face-LLaVA significantly outperforms existing open-source models with a small amount of training data and is comparable to commercial ones like GPT-4o and Gemini. The dataset will be released at https://***/CVI-SZU/FaceBench. Copyright © 2025, The Authors. All rights reserved.

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Downstream-agnostic Adversarial Examples

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Downstream-agnostic Adversarial Examples

International Conference on Computer Vision (ICCV)

作者： Ziqi Zhou Shengshan Hu Ruizhi Zhao Qian Wang Leo Yu Zhang Junhui Hou Hai Jin School of Cyber Science and Engineering Huazhong University of Science and Technology National Engineering Research Center for Big Data Technology and System Services Computing Technology and System Lab Hubei Key Laboratory of Distributed System Security Hubei Engineering Research Center on Big Data Security School of Cyber Science and Engineering Wuhan University School of Information and Communication Technology Griffith University Department of Computer Science City University of Hong Kong School of Computer Science and Technology Huazhong University of Science and Technology Cluster and Grid Computing Lab

Self-supervised learning usually uses a large amount of unlabeled data to pre-train an encoder which can be used as a general-purpose feature extractor, such that downstream users only need to perform fine-tuning operations to enjoy the benefit of "large model". Despite this promising prospect, the security of pre-trained encoder has not been thoroughly investigated yet, especially when the pre-trained encoder is publicly available for commercial *** this paper, we propose AdvEncoder, the first framework for generating downstream-agnostic universal adversarial examples based on the pre-trained encoder. AdvEncoder aims to construct a universal adversarial perturbation or patch for a set of natural images that can fool all the downstream tasks inheriting the victim pre-trained encoder. Unlike traditional adversarial example works, the pre-trained encoder only outputs feature vectors rather than classification labels. Therefore, we first exploit the high frequency component information of the image to guide the generation of adversarial examples. Then we design a generative attack framework to construct adversarial perturbations/patches by learning the distribution of the attack surrogate dataset to improve their attack success rates and transferability. Our results show that an attacker can successfully attack downstream tasks without knowing either the pre-training dataset or the downstream dataset. We also tailor four defenses for pre-trained encoders, the results of which further prove the attack ability of AdvEncoder. Our codes are available at: https://***/CGCL-codes/AdvEncoder.

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