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检索条件"机构=Department of Architecture and Computer Technology"

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Creation of a Database Including a Set of Biological Features Related to Protein Sequences and Their Corresponding Alignment

Creation of a Database Including a Set of Biological Feature...

引用

Annual IEEE Symposium on computer-Based Medical Systems

作者： F. Ortuño H. Pomares I. Rojas O. Valenzuela Department of Computer Architecture and Technology University of Granada Granada Spain

There are currently several biological databases related to proteins depending on the information we are interested to extract. Therefore, since a heterogeneous set of features will be needed (domains, structures, ontology terms, etc), several quite different databases should be consulted. The handling of different databases can become difficult, as each database could provide a different nomenclature for the same proteins. Anyway, these databases usually provides some mapping tools in order to determine the correspondence among the different nomenclatures used for the same protein. The main goal of this paper is to provide a biological database including a huge amount of protein information in order to be used for different purposes in bioinformatics. This database will be designed as a flexible and extensible tool and it could be extended and updated when new proteins are annotated or the included ones are modified.

关键词： Proteins Databases Bioinformatics Software Ontologies Educational institutions

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Concurrency bug localization using shared memory access pairs 14

Concurrency bug localization using shared memory access pair...

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2014 19th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, PPoPP 2014

作者： Wang, Wenwen Wu, Chenggang Yew, Pen-Chung Yuan, Xiang Wang, Zhenjiang Li, Jianjun Feng, Xiaobing State Key Laboratory of Computer Architecture Institute of Computing Technology Chinese Academy of Sciences China University of Chinese Academy of Sciences Beijing China Department of Computer Science and Engineering University of Minnesota at Twin-Cities United States

ISBN: (纸本)9781450326568

Non-determinism in concurrent programs makes their debugging much more challenging than that in sequential programs. To mitigate such difficulties, we propose a new technique to automatically locate buggy shared memory accesses that triggered concurrency bugs. Compared to existing fault localization techniques that are based on empirical statistical approaches, this technique has two advantages. First, as long as enough successful runs of a concurrent program are collected, the proposed technique can locate buggy memory accesses to the shared data even with only one single failed run captured, as opposed to the need of capturing multiple failed runs in other statistical approaches. Second, the proposed technique is more precise because it considers memory accesses in those failed runs that terminate prematurely.

关键词： Program debugging

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Concurrency bug localization using shared memory access pairs

Concurrency bug localization using shared memory access pair...

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关键词： Memory architecture

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BPM/BPM+: Software-based dynamic memory partitioning mechanisms for mitigating dram bank-/channel-level interferences in multicore systems

BPM/BPM+: Software-based dynamic memory partitioning mechani...

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作者： Liu, Lei Cui, Zehan Li, Yong Bao, Yungang Chen, Mingyu Wu, Chengyong State Key Laboratory of Computer Architecture Institute of Computing Technology Chinese Academy of Sciences China Graduate School CAS China Department of ECE University of Pittsburgh United States

The main memory system is a shared resource in modern multicore machines that can result in serious interference leading to reduced throughput and unfairness. Many new memory scheduling mechanisms have been proposed to address the interference problem. However, these mechanisms usually employ relative complex scheduling logic and need modifications to Memory Controllers (MCs), which incur expensive hardware design and manufacturing overheads. This article presents a practical software approach to effectively eliminate the interference without any hardware modifications. The key idea is to modify the OS memory management system and adopt a page-coloring-based Bank-level Partitioning Mechanism (BPM) that allocates dedicated DRAM banks to each core (or thread). By using BPM, memory requests from distinct programs are segregated across multiple memory banks to promote locality/fairness and reduce interference. We further extend BPM to BPM+ by incorporating channel-level partitioning, on which we demonstrate additional gain over BPM in many cases. To achieve benefits in the presence of diverse application memory needs and avoid performance degradation due to resource underutilization, we propose a dynamic mechanism upon BPM/BPM+ that assigns appropriate bank/channel resources based on application memory/bandwidth demands monitored through PMU (performance- monitoring unit) and a low-overhead OS page table scanning process. We implement BPM/BPM+ in Linux 2.6.32.15 kernel and evaluate the technique on four-core and eight-core real machines by running a large amount of randomly generated multiprogrammed and multithreaded workloads. Experimental results show that BPM/BPM+ can improve the overall system throughput by 4.7%/5.9%, on average, (up to 8.6%/9.5%) and reduce the unfairness by an average of 4.2%/6.1% (up to 15.8%/13.9%). © 2014 ACM.

关键词： Scheduling

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Fusion Coherence: Scalable Cache Coherence for Heterogeneous Kilo-Core System

Fusion Coherence: Scalable Cache Coherence for Heterogeneous...

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10th Annual Conference of Advanced computer architecture, ACA 2014

作者： Pei, Songwen Kim, Myoung-Seo Gaudiot, Jean-Luc Xiong, Naixue Department of Computer Science and Engineering University of Shanghai for Science and Technology Shanghai 200093 China State Key Laboratory of Computer Architecture Institute of Computing Technology Chinese Academy of Sciences Beijing 100190 China Department of Electrical Engineering and Computer Science University of California Irvine CA 92697 United States School of Computer Science Colorado Technical University Springs CO 80907 United States

ISBN: (纸本)9783662444900

Future heterogeneous systems will integrate CPUs and GPUs on a single chip to achieve high computing performance as well as high throughput. In general, it would discard the current discrete pattern and will build a uniformed shared memory system avoiding explicit data movement among CPUs and GPUs connected by high throughput NoC. We propose a scalable cache coherence solution Fusion Coherence for Heterogeneous Kilo-core System architecture by integrating CPUs and GPUs on a single chip to mitigate the coherence bandwidth side effects of GPU memory requests as well as overhead of copying data among memories of CPUs and GPUs. The Fusion Coherence coalesces L3 data cache of CPUs and GPUs based on a uniformed physical memory, further integrates a region directory and cuckoo directory into two levels of cache coherence directory without modifying cache coherence protocol. According to the experimental results with a subset of Rodina benchmarks, it is effective to decrease the overhead of data transfer and get an average execution speedup by 2.4x. The highest speedup is approximate to 4x for data-intensive applications. © Springer-Verlag Berlin Heidelberg 2014.

关键词： Program processors

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A leader election service for crash-recovery and omission environments

引用

8th International Conference on Ubiquitous Computing and Ambient Intelligence, UCAmI 2014

作者： Fernández-Campusano, Christian Cortiñas, Roberto Larrea, Mikel Computer Architecture and Technology Department University of the Basque Country UPV/EHU Paseo Manuel de Lardizabal 1 San Sebastián20018 Spain

ISBN: (纸本)9783319131016

Leader election is a key service for many dependable ubiquitous systems. It eases the consistent management of replicas in current highly available computing scenarios. This paper presents our work on the design of a leader election service for crash-recovery and omission environments, in order to support fault-tolerant agreement protocols, e.g., Paxos. © Springer International Publishing Switzerland 2014.

关键词： Fault tolerance

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A Synthesis of Low Component Count for Current-mode PID, PI and PD Controllers Employing Single CCTA and Grounded Elements

A Synthesis of Low Component Count for Current-mode PID, PI ...

引用

International Conference on Telecommunications and Signal Processing

作者： Supawat Lawanwisut Somchai Srisakultiew Montree Siripruchyanun Department of Information and Communication Engineering Faculty of Industrial Technology Thepsatri Rajabhat University Department of Computer Engineering Faculty of Engineering and Architecture Rajamangala University of Technology Isan Department of Teacher Training in Electrical Engineering Faculty of Technical Education King Mongkut's University of Technology North Bangkok

ISBN: (纸本)9781479984992

This paper presents a synthesis of current-mode PI, PD and PID controllers employing current conveyor transconductance amplifier (CCTA). The features of these controllers are that: the output parameters can be an electronically controlled by adjusting corresponding bias currents, circuit description of the PID controller is simply formulated, it consists of only one CCTA cooperating with 2 grounded resistors and 2 grounded capacitors, PI and PD controllers are composed of single CCTA, 2 grounded resistors, 2 grounded capacitors and 3 grounded resistors, a grounded capacitor, respectively. This proposed circuit is very suitable to develop into an integrated circuit. The given results of the PSpice simulation agree well with the theoretical anticipation. The maximum power consumption in a closed-loop control system obtained from the PID controller and current-mode low-pass filter are approximately 0.393mW and PI and PD controllers are 0.379mW and 0.367mW, respectively at ±1.5V supply voltages.

关键词： PID controller PI controller PD controller CCTA Current-mode Low component

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Controlling physically based virtual musical instruments using the gloves 14th

Controlling physically based virtual musical instruments usi...

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14th International conference on New Interfaces for Musical Expression, NIME 2014

作者： Serafin, Stefania Perner-Wilson, Hannah Trento, Stefano Madgwick, Sebastian Grani, Francesco Mitchell, Tom Department of Architecture Design and Media Technology Aalborg University Copenhagen Denmark Plusea United Kingdom Mechanical Engineering Department University of Bristol United Kingdom Department of Computer Science and Creative Technologies UWE Bristol United Kingdom

In this paper we propose an empirical method to develop mapping strategies between a gestural-based interface (the Gloves) and physically based sound synthesis models. An experiment was conducted to investigate which gestures listeners associate with sounds synthesised using physical models, corresponding to three categories of sound: sustained, iterative and impulsive. The results of the experiment show that listeners perform similar gestures when controlling sounds from the different categories. We used such gestures in order to create the mapping strategy between the Gloves and the physically based synthesis engine. © 2020 Steering Committee of the International Conference on New Interfaces for Musical Expression.

关键词： Mapping

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The effect of evolutionary coupling on software defects: An industrial case study on a legacy system 14

The effect of evolutionary coupling on software defects: An ...

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8th ACM/IEEE International Symposium on Empirical Software Engineering and Measurement, ESEM 2014

作者： Kirbas, Serkan Sen, Alper Caglayan, Bora Bener, Ayse Mahmutogullari, Rasim Department of Computer Engineering Bogazici University Istanbul Turkey Mathematics Mechanical and Industrial Engineering Ryerson University Toronto Canada Garanti Technology Architecture and Security Management Dept. Istanbul Turkey

ISBN: (纸本)9781450327749

Evolutionary coupling is defined as the implicit relationship between two or more software artifacts that are frequently changed together. In this study we investigate the effect of evolutionary coupling on defect proneness of a large financial legacy software in an industrial software development environment. We collected historical data for 5 years from 3 different software repositories containing 150 thousand files on 274 modules. Our results indicate that there is a positive correlation between evolutionary coupling and defect measures. Furthermore, we built linear and logistic regression models by using evolutionary coupling measures in order to explain defects. Although regression analysis results show that evolutionary coupling measures can be useful to explain defects, especially for modules in which high correlation is detected, explanatory power decreases dramatically with the decreasing correlation. © 2014 Authors.

关键词： Defects

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The challenges of social media technology to management engineering courses

The challenges of social media technology to management engi...

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2014 International Conference on computer, Intelligent Computing and Education technology, CICET 2014

作者： Xie, H. Shi, Y. Liang, T. Li, S. Department of Technology Illinois State University Normal IL United States Department of Computer and Information Science Xi'an Technological University Shaanxi China Department of Systems Engineering University of Arkansas Little Rock AR United States School of Management Xi'an University of Architecture and Technology Xi'an China

ISBN: (纸本)9781138026391

The use of social media involves employing web and mobile technologies to support interactive dialogue and mediate human communication. With the influence of social media in political, economic, and recreational fields, higher educational institutions start to recognize and utilize the idea of adopting the emerging technology in education processes. This paper highlights the difficulty that educators face in the age of social media. The paper discusses how to teach an increasingly networked generation that is ready to search for the opinions of their peers (who may be anonymous) on the internet besides what they learn from classroom teaching. Particularly, this paper discusses the challenges, opportunities, and possible practice of using social media in management engineering courses. The paper suggests using Cooperative Learning as the instructional method to let students work together in small groups to enable and organize students to participate the authentic and focused learning activities. © 2014 Taylor & Francis Group, London, UK.

关键词： Students

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