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检索条件"机构=Department of Biomedical Engineering and Program in Bioinformatics"
187 条 记 录,以下是141-150 订阅
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Author Correction: Integration of human adipocyte chromosomal interactions with adipose gene expression prioritizes obesity-related genes from GWAS
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Nature communications 2018年 第1期9卷 3472页
作者: David Z Pan Kristina M Garske Marcus Alvarez Yash V Bhagat James Boocock Elina Nikkola Zong Miao Chelsea K Raulerson Rita M Cantor Mete Civelek Craig A Glastonbury Kerrin S Small Michael Boehnke Aldons J Lusis Janet S Sinsheimer Karen L Mohlke Markku Laakso Päivi Pajukanta Arthur Ko Department of Human Genetics David Geffen School of Medicine at UCLA Los Angeles CA 90095 USA. Bioinformatics Interdepartmental Program UCLA Los Angeles CA 90095 USA. Department of Genetics University of North Carolina Chapel Hill NC 27599 USA. Department of Biomedical Engineering University of Virginia Charlottesville VA 22904 USA. Big Data Institute University of Oxford Oxford OX3 7LF UK. Department of Twin Research and Genetic Epidemiology King's College London UK. Department of Biostatistics University of Michigan Ann Arbor MI 48109 USA. Department of Biomathematics David Geffen School of Medicine at UCLA Los Angeles CA 90095 USA. Institute of Clinical Medicine Internal Medicine University of Eastern Finland and Kuopio University Hospital Kuopio FI-70210 Finland. Molecular Biology Institute at UCLA Los Angeles CA 90095 USA. Department of Human Genetics David Geffen School of Medicine at UCLA Los Angeles CA 90095 USA. a5ko@ucla.edu. Molecular Biology Institute at UCLA Los Angeles CA 90095 USA. a5ko@ucla.edu.
In the original version of this Article, Supplementary Table 10 contained incorrect primer sequences for the mobility shift assay for SNP rs4776984. These errors have now been fixed and the corrected version of the Su...
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Learning Cellular Objectives from Fluxes by Inverse Optimization
Learning Cellular Objectives from Fluxes by Inverse Optimiza...
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IEEE Annual Conference on Decision and Control
作者: Qi Zhao Arion Stettner Ed Reznik Daniel Segre Ioannis Ch. Paschalidis Dept. of Electrical and Computer Eng. and Division of Systems Engineering Boston University Department of Biomedical Engineering Boston University Bioinformatics Program Department of Biology and Department of Biomedical Engineering Boston University
Flux Balance Analysis (FBA) is a widely used approach for studying biochemical networks, and in particular the genome-scale metabolic network reconstructions. It formulates the problem of predicting a cell's chemi... 详细信息
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Creation and analysis of biochemical constraint-based models: The COBRA Toolbox v3.0
arXiv
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arXiv 2017年
作者: Heirendt, Laurent Arreckx, Sylvain Pfau, Thomas Mendoza, Sebastián N. Richelle, Anne Heinken, Almut Haraldsdóttir, Hulda S. Wachowiak, Jacek Keating, Sarah M. Vlasov, Vanja Magnusdóttir, Stefania Ng, Chiam Yu Preciat, German Žagare, Alise Chan, Siu H.J. Aurich, Maike K. Clancy, Catherine M. Modamio, Jennifer Sauls, John T. Noronha, Alberto Bordbar, Aarash Cousins, Benjamin El Assal, Diana C. Valcarcel, Luis V. Apaolaza, Iñigo Ghaderi, Susan Ahookhosh, Masoud Guebila, Marouen Ben Kostromins, Andrejs Sompairac, Nicolas Le, Hoai M. Ma, Ding Sun, Yuekai Wang, Lin Yurkovich, James T. Oliveira, Miguel A.P. Vuong, Phan T. El Assal, Lemmer P. Kuperstein, Inna Zinovyev, Andrei Scott Hinton, H. Bryant, William A. Aragón Artacho, Francisco J. Planes, Francisco J. Stalidzans, Egils Maass, Alejandro Vempala, Santosh Hucka, Michael Saunders, Michael A. Maranas, Costas D. Lewis, Nathan E. Sauter, Thomas Palsson, Bernhard Ø. Thiele, Ines Fleming, Ronan M.T. Luxembourg Centre for Systems Biomedicine University of Luxembourg 6 avenue du Swing BelvauxL-4367 Luxembourg Life Sciences Research Unit University of Luxembourg 6 avenue du Swing BelvauxL-4367 Luxembourg University of Chile Blanco Encalada 2085 Santiago Chile Department of Pediatrics University of California San Diego School of Medicine San DiegoCA92093 United States Hinxton CambridgeCB10 1SD United Kingdom Department of Chemical Engineering Pennsylvania State University University University ParkPA16802 United States Department of Physics University of California San Diego 9500 Gilman Dr. San DiegoCA92093 United States Bioinformatics and Systems Biology Program University of California San Diego San DiegoCA United States Sinopia Biosciences San DiegoCA United States School of Computer Science Algorithms and Randomness Center Georgia Institute of Technology AtlantaGA United States Biomedical Engineering and Sciences Department TECNUN University of Navarra Paseo de Manuel Lardizabal 13 San Sebastian20018 Spain Institute of Microbiology and Biotechnology University of Latvia Jelgavas iela 1 RigaLV-1004 Latvia Department of Management Science and Engineering Stanford University StanfordCA94305-4026 United States Bioengineering Department University of California San Diego San DiegoCA United States Utah State University Research Foundation 1695 North Research Park Way North LoganUT84341 United States Centre for Integrative Systems Biology and Bioinformatics Department of Life Sciences Imperial College London London United Kingdom Department of Mathematics University of Alicante Spain California Institute of Technology Computing and Mathematical Sciences MC 305-16 1200 E. California Blvd. PasadenaCA91125 United States Mathomics Center for Mathematical Modeling University of Chile Beauchef 851 Santiago Chile Novo Nordisk Foundation Center for Biosustainability University of California San Diego San DiegoCA92093 Uni
COnstraint-Based Reconstruction and Analysis (COBRA) provides a molecular mechanistic framework for integrative analysis of experimental data and quantitative prediction of physicochemically and biochemically feasible... 详细信息
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Addendum: Shear-induced Notch-Cx37-p27 axis arrests endothelial cell cycle to enable arterial specification
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Nature communications 2018年 第1期9卷 720页
作者: Jennifer S Fang Brian G Coon Noelle Gillis Zehua Chen Jingyao Qiu Thomas W Chittenden Janis M Burt Martin A Schwartz Karen K Hirschi Department of Medicine Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. Yale Cardiovascular Research Center Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. Vascular Biology and Therapeutics Program Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. Yale Stem Cell Center Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. Computational Statistics and Bioinformatics Group Advanced Artificial Intelligence Research Laboratory WuXi NextCODE 55 Cambridge Parkway 8th Floor Cambridge MA 02142 USA. Department of Genetics Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. Division of Genetics and Genomics Boston Children's Hospital Harvard Medical School A-111 25 Shattuck Street Boston MA 02115 USA. Department of Biological Engineering Massachusetts Institute of Technology 21 Ames Street #56-651 Cambridge MA 02142 USA. Department of Physiology College of Medicine The University of Arizona 1501 N. Campbell Road Tucson AZ 85724 USA. Department of Cell Biology Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. Department of Biomedical Engineering Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. Department of Medicine Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. karen.hirschi@yale.edu. Yale Cardiovascular Research Center Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. karen.hirschi@yale.edu. Vascular Biology and Therapeutics Program Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. karen.hirschi@yale.edu. Yale Stem Cell Center Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. karen.hirschi@yale.edu. Department of Genetics Yale University School of Medicine 333 Cedar Street New Haven CT 06520 USA. karen.hirschi@yale.edu. Department of Biomedic
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Donor Selection for Hematopoietic Stem Cell Transplant Using Cost-Sensitive SVM
Donor Selection for Hematopoietic Stem Cell Transplant Using...
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International Conference on Machine Learning and Applications (ICMLA)
作者: Adarsh Sivasankaran Vladimir Cherkassky Mark Albrecht Eric Williams Martin Maiers Biomedical Informatics and Computational Biology Department of Electrical and Computer Engineering University of Minnesota Minneapolis Minnesota U.S.A. Bioinformatics Research National Marrow Donor Program Minneapolis Minnesota U.S.A.
Donor selection for Hematopoietic Stem Cell Transplant often requires physicians to manually select 3 to 5 donors from a list of 100s of genetically compatible donors as identified by HLA-based matching algorithms. Th... 详细信息
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Computational systems biology of metabolism in single- and multi- species microbial systems
Computational systems biology of metabolism in single- and m...
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Liaison Functions 2014 - Core programming Area at the 2014 AIChE Annual Meeting
作者: Zomorrodi, Ali R. Department of Biomedical Engineering Graduate Program in Bioinformatics Boston University BostonMA United States
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Methods for Evaluating Medical Tests and Biomarkers
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Diagnostic and Prognostic Research 2017年 第1期1卷 1-34页
作者: Gowri Gopalakrishna Miranda Langendam Patrick Bossuyt Mariska Leeflang Rob Scholten Anna Noel-Storr James Thomas Iain Marshall Byron Wallace Penny Whiting Clare Davenport Gowri GopalaKrishna Isabel de Salis Sue Mallett Robert Wolff Marie Westwood Jos Kleinen Richard Riley Gary Collins Hans Reitsma Karel Moons Antonia Zapf Katharina Kramer Annika Hoyer Oliver Kuss J. Ensor R. D. Riley J. J. Deeks E. C. Martin Gerta Rücker Martin Schumacher Susanne Steinhauser Joie Ensor Kym Snell Brian Willis Jon Deeks Thomas Debray Lavinia Ferrante di Ruffano Sian Taylor-Phillips Chris Hyde Stuart A. Taylor Gauraang Batnagar Lavinia Ferrante Di Ruffano Farah Seedat Aileen Clarke Sarah Byron Frances Nixon Rebecca Albrow Thomas Walker Carla Deakin Zhivko Zhelev Harriet Hunt Yaling Yang Lucy Abel James Buchanan Thomas Fanshawe Bethany Shinkins Laure Wynants Sabine Van Huffel Jan Verbakel Dirk Timmerman Ben Van Calster Aeliko Zwinderman Jason Oke Jack O’Sullivan Rafael Perera Brian Nicholson Hannah L. Bromley Tracy E. Roberts Adele Francis Denniis Petrie G. Bruce Mann Kinga Malottki Holly Smith Lucinda Billingham Alice Sitch Oke Gerke Mie Holm-Vilstrup Eivind Antonsen Segtnan Ulrich Halekoh Poul Flemming Høilund-Carlsen Bernard G. Francq Jac Dinnes Julie Parkes Walter Gregory Jenny Hewison Peter Selby Doug Altman William Rosenberg Julien Asselineau Paul Perez Aïssatou Paye Emilie Bessede Cécile Proust-Lima Christiana Naaktgeboren Joris de Groot Johannes Reitsma Anne Rutjes Emmanuel Ogundimu Jonathan Cook Yannick Le Manach Yvonne Vergouwe Romin Pajouheshnia Rolf Groenwold Karen Moons Linda Peelen Bavo De Cock Daan Nieboer Ewout W. Steyerberg Micael J. Pencina Jennifer Cooper Nick Parsons Chris Stinton Steve Smith Andy Dickens Rachel Jordan Alexandra Enocson David Fitzmaurice Peymane Adab Charles Boachie Gaj Vidmar Karoline Freeman Martin Connock Rachel Court Carl Moons Jessica Harris Zoe Plummer Barnaby Reeves Chris Rogers Andrew Mumford Kurtis Lee Veerle Verheyden Gianni D. Angelini Gavin J. Murphy Jeremy Huddy Melody Ni George Hanna Department of Clinical Epidemiology Biostatistics & Bioinformatics Academic Medical Center University of Amsterdam Amsterdam The Netherlands Department of Clinical Epidemiology and Biostatistics Academic Medical Center University of Amsterdam Amsterdam Netherlands Cochrane Netherlands Julius Center for Health Sciences and Primary Care University Medical Center Utrecht Utrecht Netherlands Cochrane Dementia and Cognitive Improvement Group University of Oxford Oxford UK EPPI-Centre Department of Social Science University College London London UK Division of Health and Social Care Research King’s College London London UK College of Computer and Information Science Northeastern University Boston USA University Hospitals Bristol NHS Foundation Trust School of Social and Community Medicine Bristol UK Institute of Applied Health Research University of Birmingham Birmingham UK School of Social and Community Medicine University of Bristol Bristol UK Kleijnen Systematic Reviews Ltd York UK Research Institute for Primary Care and Health Sciences Keele University Keele UK Centre for Statistics in Medicine Nuffield Department of Orthopaedics Rheumatology and Musculoskeletal Sciences University of Oxford Oxford UK Julius Center for Health Sciences and Primary Care University Medical Center Utrecht Utrecht The Netherlands Cochrane Netherlands University Medical Center Utrecht Utrecht The Netherlands Julius Center for Health Sciences and Primary Care University Medical Center Utrecht 3584 CG Utrecht Netherlands Department of Medical Statistics University Medical Center Göttingen Göttingen Germany Institute for Biometry and Epidemiology German Diabetes Center Leibniz Institute for Diabetes Research at Heinrich Heine University Düsseldorf Germany Manchester Pharmacy School University of Manchester Manchester UK Institute for Medical Biometry and Statistics Faculty of Medicine and Medical Center – University of Freiburg Stefan-Meier-Str. 26 79104 Freiburg Germany
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Learning modular structures from network data and node variables  31
Learning modular structures from network data and node varia...
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31st International Conference on Machine Learning, ICML 2014
作者: Azizi, Elham Airoldi, Edoardo M. Galagan, James E. Bioinformatics Program Boston University BostonMA02215 United States Department of Statistics Harvard University CamrbdigeMA02138 United States Departments of Biomedical Engineering and Microbiology Boston University BostonMA02215 United States
A standard technique for understanding underlying dependency structures among a set of variables posits a shared conditional probability distribution for the variables measured on individ-uals within a group. This app... 详细信息
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Proceedings of the 15th Annual UT-KBRIN bioinformatics Summit 2016 : Cadiz, KY, USA. 8-10 April 2016
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BMC bioinformatics 2016年 第SUPPL 10期17卷 297页
作者: Eric C. Rouchka Julia H. Chariker Benjamin J. Harrison Juw Won Park Xueyuan Cao Stanley Pounds Susana Raimondi James Downing Raul Ribeiro Jeffery Rubnitz Jatinder Lamba Bernie J. Daigle Deborah Burgess Stephanie Gehrlich John C. Carmen Nicholas Johnson Chandrakanth Emani Kalpani De Silva Michael P. Heaton Theodore S. Kalbfleisch Teeradache Viangteeravat Rahul Mudunuri Oluwaseun Ajayi Fatih Şen Eunice Y. Huang Mohammad Mohebbi Luaire Florian Douglas J. Jackson John F. Naber AKM Sabbir Sally R. Ellingson Yuping Lu Charles A Phillips Michael A. Langston Rahul K. Sevakula Raghuveer Thirukovalluru Nishchal K. Verma Yan Cui Mohammed Sayed Jing Wang Qi Liu Yu Shyr Xiaofei Zhang Naresh Prodduturi Gavin R. Oliver Diane Grill Jie Na Jeanette Eckel-Passow Eric W. Klee Michael M. Goodin Mark Farman Harrison Inocencio Chanyong Jang Jerzy W. Jaromczyk Neil Moore Kelly Sovacool Leon Dent Mike Izban Sammed Mandape Shruti Sakhare Siddharth Pratap Dana Marshall M Scotty DePriest James N. MacLeod Hanady Adam Ethan Blandford Joel Campbell Joshua Castlen Brittany Dixon Ginger Gilbert Aaron Hall Philip Kreisle Jessica Lasher Bethany Oakes Allison Speer Maximilian Valentine Naga Satya V. Rao Nagisetty Rony Jose Robert Rooney David Hains Department of Computer Engineering and Computer Science University of Louisville Duthie Center for Engineering Louisville USA Kentucky Biomedical Research Infrastructure (KBRIN) Bioinformatics Core Louisville USA Department of Psychological and Brain Sciences University of Louisville Louisville USA Department of Anatomical Sciences and Neurobiology University of Louisville Louisville USA Department of Biostatistics St. Jude Children’s Research Hospital Memphis USA Department of Pathology St. Jude Children’s Research Hospital Memphis USA Department of Oncology St. Jude Children’s Research Hospital Memphis USA Department of Pharmacotherapy and Translational Research College of Pharmacy University of Florida Gainesville USA Department of Biological Sciences University of Memphis Memphis USA Department of Computer Science University of Memphis Memphis USA Department of Computer Science Northern Kentucky University Highland Heights USA Department of Biological Sciences Northern Kentucky University Highland Heights USA Department of Biology Western Kentucky University Bowling Green USA Interdisciplinary Studies Program: Specialization in Bioinformatics University of Louisville Louisville USA United States Department of Agriculture Agricultural Research Service United States Meat Animal Research Center Clay Center USA Department of Biochemistry and Molecular Genetics School of Medicine University of Louisville Louisville USA Biomedical Informatics Core Children’s Foundation Research Institute Memphis USA Department of Pediatrics University of Tennessee Health Science Center Memphis USA Department of Electrical and Computer Engineering University of Louisville Louisville USA Department of Computer Science University of Kentucky Lexington USA Division of Biomedical Informatics College of Medicine University of Kentucky Lexington USA Department of Electrical Engineering and Computer Science University of Tennessee Knoxville USA Department of Electrical E
I1 Proceedings of the Fifteenth Annual UT- KBRIN bioinformatics Summit 2016 Eric C. Rouchka, Julia H. Chariker, Benjamin J. Harrison, Juw Won Park P1 CC-PROMISE: Projection onto the Most Interesting Statistical Eviden... 详细信息
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Erratum to: The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species
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Genome biology 2017年 第1期18卷 11页
作者: Alexie Papanicolaou Marc F Schetelig Peter Arensburger Peter W Atkinson Joshua B Benoit Kostas Bourtzis Pedro Castañera John P Cavanaugh Hsu Chao Christopher Childers Ingrid Curril Huyen Dinh HarshaVardhan Doddapaneni Amanda Dolan Shannon Dugan Markus Friedrich Giuliano Gasperi Scott Geib Georgios Georgakilas Richard A Gibbs Sarah D Giers Ludvik M Gomulski Miguel González-Guzmán Ana Guillem-Amat Yi Han Artemis G Hatzigeorgiou Pedro Hernández-Crespo Daniel S T Hughes Jeffery W Jones Dimitra Karagkouni Panagiota Koskinioti Sandra L Lee Anna R Malacrida Mosè Manni Kostas Mathiopoulos Angela Meccariello Monica Munoz-Torres Shwetha C Murali Terence D Murphy Donna M Muzny Georg Oberhofer Félix Ortego Maria D Paraskevopoulou Monica Poelchau Jiaxin Qu Martin Reczko Hugh M Robertson Andrew J Rosendale Andrew E Rosselot Giuseppe Saccone Marco Salvemini Grazia Savini Patrick Schreiner Francesca Scolari Paolo Siciliano Sheina B Sim George Tsiamis Enric Ureña Ioannis S Vlachos John H Werren Ernst A Wimmer Kim C Worley Antigone Zacharopoulou Stephen Richards Alfred M Handler Hawkesbury Institute for the Environment Western Sydney University Sydney Australia. Justus-Liebig-University Giessen Institute for Insect Biotechnology 35394 Giessen Germany. Department of Biological Sciences Cal Poly Pomona Pomona CA 91768 USA. Department of Entomology and Center for Disease Vector Research University of California Riverside Riverside CA 92521 USA. Interdepartmental Graduate Program in Genetics Genomics & Bioinformatics University of California Riverside Riverside CA 92521 USA. Department of Biological Sciences University of Cincinnati Cincinnati OH 45221 USA. Insect Pest Control Laboratory Joint FAO/IAEA Programme of Nuclear Techniques in Food and Agriculture Seibersdorf Vienna Austria. Department of Environmental and Natural Resources Management University of Patras Agrinio Greece. Department of Environmental Biology Centro de Investigaciones Biológicas CSIC 28040 Madrid Spain. Human Genome Sequencing Center Department of Human and Molecular Genetics Baylor College of Medicine 77030 Houston TX USA. National Agricultural Library USDA 20705 Beltsville MD USA. Georg-August-Universität Göttingen Johann-Friedrich-Blumenbach-Institut für Zoologie und Anthropologie 37077 Göttingen Germany. Department of Biology University of Rochester 14627 Rochester NY USA. Department of Biological Sciences Wayne State University 48202 Detroit MI USA. Department of Biology and Biotechnology University of Pavia 27100 Pavia Italy. USDA-ARS Pacific Basin Agricultural Research Center 96720 Hilo HI USA. DIANA-Lab Department of Electrical & Computer Engineering University of Thessaly 382 21 Volos Greece and Hellenic Pasteur Institute 11521 Athens Greece. Department of Entomology University of Illinois at Urbana-Champaign 61801 Urbana IL USA. Department of Biological Sciences Oakland University 48309 Rochester MI USA. Department of Biochemistry and Biotechnology University of Thessaly Larissa Greece. Department of Biology Univer
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