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Web services based bio-signal system leveraging support vector machines

Web services based bio-signal system leveraging support vect...

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2009 9th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2009

作者： Hsieh, Sung-Huai Hsieh, Sheau-Ling Shen, Chia-Ping Chen, Wei-Hsin Cheng, Po-Hsun Hsu, Kai-Ping Chen, Chi-Huang Lai, Feipei Information Systems Office National Taiwan University Hospital Taipei Taiwan Department of Computer Science and Information Engineering National Taiwan University Taipei Taiwan Department of Electrical Engineering National Taiwan University Taipei Taiwan Graduate Institute of Biomedical Electronics and Bioinformatics National Taiwan University Taiwan Department of Software Engineering National Kaohsiung Normal University Taiwan

ISBN: (纸本)9780769536569

Bio-signal analysis is one of the most important approaches to biomedical engineering. The health information such as ECG, PCG, EMG and EEG are often recorded in digital format to be analyzed. In this paper, a bio-signal analyzing web service system using Support Vector Machines (SVM) classifier technique is proposed. The bio-signals are recorded in digital format as the input of the system. In addition, based on the concept of Service-Oriented Architecture (SOA), the system under web services .NET is designed. The system provides features including heterogeneous platform, protocols, as well as applications. The system has been designed with the purpose of seamless integration into the Health Information System. © 2009 IEEE.

关键词： Electrocardiograms

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Secure biometric system for accessing home appliances via Internet

Secure biometric system for accessing home appliances via In...

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International Conference for Internet Technology and Secured Transactions (ICITST)

作者： Arpita Mondal Kaushik Roy Prabir Bhattacharya Department of Computer Science and Software Engineering Concordia University Canada Concordia Institute of Information Systems Engineering Concordia University Canada

Alongside multitude of innovations and consequential changes in lifestyle, the ability to access home appliances or security cameras over the Internet has been in demand for some years now. In this paper, we propose an efficient, low-cost and user-friendly method to access networked home appliances over the Internet, providing strong, well integrated, three levels of security to the whole application and user data. We present a scheme in which, iris image is used for user authentication and after performing its hashing (using BioHashing), it is sent to the server through a secure communication channel utilizing Secure Socket Layer (SSL). The deterministic feature sequence from the iris image is extracted using 1D log-Gabor filters. Mersenne twister random number generator algorithm is used to produce an array of pseudo-random numbers which is later orthonormalised employing GramSchmidt orthonormalization algorithm for performing BioHashing. In addition to this protected interaction mechanism, we use a single Authentication Server in order to enable access to the home appliances of a complete housing society via Internet, which reduces user responsibility and improves accessibility of this endeavor without compromising on system security. We demonstrate the perfect recognition efficiency of this system with equal error rate (EER) of 0% on CASIA 1 iris image dataset.

关键词： Biometrics Home appliances Internet Data security Iris Authentication Web server Technological innovation Cameras IP networks

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A flexible infrastructure for distributed deployment in adaptive sensor webs

A flexible infrastructure for distributed deployment in adap...

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IEEE Conference on Aerospace

作者： William R. Otte John S. Kinnebrew Douglas C. Schmidt Gautam Biswas Institute of Software Integrated Systems Department of Electrical Engineering and Computer Science Vanderbilt University Nashville TN USA

Distributed sensor Webs typically operate in dynamic environments where operating conditions, transient phenomena, availability of resources, and network connection quality change frequently and unpredictably. Often these changes can neither be completely anticipated nor accurately described during development or deployment. Our prior work has described how we developed agents and services that are capable of monitoring these changing conditions and adapting system parameters using the CORBA component model (CCM) deployment infrastructure as part of the multiagent architecture for coordinated responsive observations (MACRO) platform. Our recent application of MACRO to the South East Alaska monitoring network for Science, Telecommunications, Education, and Research (SEAMONSTER) project has identified new distributed deployment infrastructure challenges common to computationally constrained field environments in adaptive sensor Webs. These challenges include standardized execution of low-level hardware-dependent actions and on-going data tasks, automated provisioning of agents for heterogeneous field hardware, and minimizing deployment infrastructure overhead. This paper describes how we extended MACRO to address these sensor Web challenges by creating an action/effector framework standardizing the execution of lightweight actions and providing for automated provisioning of MACRO agents, in addition to footprint optimizations to the underlying CCM infrastructure.

关键词： Sensor phenomena and characterization Middleware Sensor systems Resource management Hardware Availability computer networks Distributed computing Weather forecasting Network servers

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A Study of Network-based Approach for Cancer Classification

A Study of Network-based Approach for Cancer Classification

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International Conference on Information Management and engineering, ICIME

作者： R. Jumali S. Deris S.Z.M. Hashim M.F. Misman M.S. Mohamad Department of Software Engineering Faculty of Computer Science and Information Systems Universiti Teknologi Malaysia Skudai Johor Malaysia

ISBN: (纸本)9781424437740

The advent of high-throughput techniques such as microarray data enabled researchers to elucidate process in a cell that fruitfully useful for pathological and medical. For such opportunities, microarray gene expression data have been explored and applied for various types of studies e.g. gene association, gene classification and construction of gene network. Unfortunately, since gene expression data naturally have a few of samples and thousands of genes, this leads to a biological and technical problems. Thus, the availability of artificial intelligence techniques couples with statistical methods can give promising results for addressing the problems. These approaches derive two well known methods: supervised and unsupervised. Whenever possible, these two superior methods can work well in classification and clustering in term of class discovery and class prediction. Significantly, in this paper we will review the benefit of network-based in term of interaction data for classification in identification of class cancer.

关键词： Cancer Gene expression DNA Bioinformatics Unsupervised learning computer science Artificial intelligence Supervised learning Humans Information management

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Graph Partitioning Method for Functional Module Detections of Protein Interaction Network

Graph Partitioning Method for Functional Module Detections o...

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International Conference on computer Technology and Development (ICCTD)

作者： Afnizanfaizal Abdullah Safaai Deris Siti Zaiton Mohd Hashim Hamimah Mohd Jamil Department of Software Engineering Faculty of Computer Science and Information Systems Universiti Teknologi Malaysia Johor Bahru Malaysia

Study on topology structure of protein interaction network has been suggested as a potential effort to discover biological functions and cellular mechanisms at systems level. In this work, we introduced a graph partitioning method to partition protein interaction network into several clusters of interacting proteins that share similar functions called functional modules. Our proposed method encompasses three major steps which are preprocessing, informative proteins selection and graph partitioning algorithm. We utilized the protein-protein interaction dataset from MIPS to test the proposed method. We use gene ontology information to validate the biological significance of the detected modules. We also downloaded protein complex information to evaluate the performance of our method. In our analysis, the method showed high accuracy performance indicates that this method capable to detect highly significance modules. Hence, this showed that functional modules detected by the proposed method are biologically significant which can be used to predict uncharacterized proteins and infer new complexes.

关键词： Bioinformatics Genomics Partitioning algorithms Ontologies Organisms Protein engineering Cellular networks Testing Design methodology computer networks

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Maximum likelihood detection with intermittent observations

Maximum likelihood detection with intermittent observations

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Annual Conference on Information Sciences and systems (CISS)

作者： Ashraf Tantawy Xenofon Koutsoukos Gautam Biswas Institute of Software Integrated Systems Department of Electrical Engineering and Computer Science Vanderbilt University Nashville TN USA

The decentralized detection performance, using wireless passive sensor networks, is analyzed according to the minimum probability of error criterion. Passive sensors communicate their measurements to the reader using data network packets, and therefore, the two main phenomena affecting the detection performance are packet loss and packet delay. In this paper, we formulate the decentralized detection problem with passive sensors and show that the optimal decision rule with packet loss is the likelihood ratio test. We present a comparative analysis study between detection with ideal and non-ideal channels, for the problem of DC level detection in white Gaussian noise. We validate the analytical results using Monte Carlo simulation study. Finally, we present a simple scheme for adaptive detector design, to restore the original detection performance, with the cost of increasing the delay for detection.

关键词： Maximum likelihood detection Sensor phenomena and characterization Wireless sensor networks Performance analysis Loss measurement Performance loss Testing Gaussian noise Detectors Costs

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High-Performance Cloud Computing: A View of Scientific Applications

High-Performance Cloud Computing: A View of Scientific Appli...

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International Symposium on Parallel Architectures, Algorithms and Networks (ISPAN)

作者： Christian Vecchiola Suraj Pandey Rajkumar Buyya Cloud computing and Distributed Systems (CLOUDS) Laboratory Department of Computer Science and Software Engineering University of Melbourne Australia

Scientific computing often requires the availability of a massive number of computers for performing large scale experiments. Traditionally, these needs have been addressed by using high-performance computing solutions and installed facilities such as clusters and super computers, which are difficult to setup, maintain, and operate. Cloud computing provides scientists with a completely new model of utilizing the computing infrastructure. Compute resources, storage resources, as well as applications, can be dynamically provisioned (and integrated within the existing infrastructure) on a pay per use basis. These resources can be released when they are no more needed. Such services are often offered within the context of a service level agreement (SLA), which ensure the desired quality of service (QoS). Aneka, an enterprise cloud computing solution, harnesses the power of compute resources by relying on private and public clouds and delivers to users the desired QoS. Its flexible and service based infrastructure supports multiple programming paradigms that make Aneka address a variety of different scenarios: from finance applications to computational science. As examples of scientific computing in the cloud, we present a preliminary case study on using Aneka for the classification of gene expression data and the execution of fMRI brain imaging workflow.

关键词： Cloud computing Quality of service Application software Scientific computing Availability Large-scale systems Context-aware services Finance computer applications Gene expression

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Algorithms for Synthesizing Safe Sets of Operation for Embedded systems

Algorithms for Synthesizing Safe Sets of Operation for Embed...

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International Conference and Workshop on engineering of computer-Based systems

作者： Abhishek Dubey Institute of Software Integrated Systems Department of Electrical Engineering and Computer Science Vanderbilt University Nashville TN USA

A large number of embedded computing systems are modeled as hybrid system with both discrete and continuous dynamics. In this paper, we present algorithms for analyzing nonlinear time-invariant continuous-time systems by employing reachability algorithms. We propose synthesis algorithms for finding sets of initial states for the continuous dynamical systems so that temporal properties, such as safety and liveness properties, are satisfied. The initial sets produced by the algorithms are related to some classical concepts for continuous dynamical systems, such as invariant sets and domains of attraction.

关键词： Embedded system Algorithm design and analysis Embedded computing State-space methods Physics computing Conferences software algorithms Embedded software software safety software systems

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Knowledge management in the global software engineering environment

Knowledge management in the global software engineering envi...

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2009 4th IEEE International Conference on Global software engineering, ICGSE 2009

作者： Richardson, Ita Casey, Valentine O'Riordan, Miriam Meehan, Bridget Mistrík, Ivan Lero - the Irish Software Engineering Research Centre University of Limerick Limerick Ireland Software System Research Centre Bournemouth University Poole Dorset BH12 5BB United Kingdom Department of Computer Science and Information Systems University of Limerick Limerick Ireland Independent Consultant Heidelberg Germany

ISBN: (纸本)9780769537108

In this paper we consider the importance of explicit knowledge management, taking into account the growth of global software engineering and the importance of corporate knowledge. We conclude by suggesting specific areas of research which should be considered important for the implementation of knowledge management within global software engineering environments. © 2009 IEEE.

关键词： Knowledge management

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An Ontology Based Approach to Non-functional Requirements Conceptualization

An Ontology Based Approach to Non-functional Requirements Co...

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International Conference on software engineering Advances (ICSEA)

作者： M. Kassab O. Ormandjieva M. Daneva Department of Software Engineering and Computer Science Concordia University Montreal Canada Department of Information Systems University of Twente Enschede Netherlands

The growing awareness of the importance of non-functional requirements (NFRs) among the requirements engineering (RE) community in the last few years led to a heightened interest in NFRs description and modeling and, in turn, to the emergence of several models intended to capture and structure the relevant concepts defining the NFRs and their relations. Yet, most of the terms and concepts in use for describing NFRs have been loosely defined, and often there is no commonly accepted taxonomy of NFRs. Common Foundation is required to enable effective communication and to enable integration of NFRs' related research activities within the RE community. In this paper, this Common Foundation will be realized by developing an ontology-based approach which is adequate for projects taking into consideration the NFRs and their relations earlier in the software development and throughout the life cycle.

关键词： Ontologies software engineering Programming Application software software standards computer science Taxonomy Communication effectiveness Information systems Knowledge engineering

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