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检索条件"机构=Department of Computer Science Bioinformatics and Computational Biology Graduate Program"
290 条 记 录,以下是281-290 订阅
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Using a literature-based NMF model for discovering gene functional relationships
Using a literature-based NMF model for discovering gene func...
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IEEE International Conference on bioinformatics and Biomedicine Workshops (BIBMW)
作者: Elina Tjioe Michael Berry Ramin Homayouni Genome Science and Technology Graduate School University of Tennessee Knoxville TN USA Department of Electrical Engineering and Computer Science University of Tennessee Knoxville TN USA Bioinformatics Program Department of Biology University of Memphis Memphis TN USA
The rapid growth of the biomedical literature and genomic information presents a major challenge for determining the functional relationships among genes. In this study, we develop a Web-based bioinformatics software ... 详细信息
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Structural characterization of RNA-binding sites of proteins: Preliminary results
Structural characterization of RNA-binding sites of proteins...
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IEEE International Conference on bioinformatics and Biomedicine Workshops (BIBMW)
作者: Fadi Towfic David C. Gemperline Cornelia Caragea Feihong Wu Drena Dobbs Vasant Honavar Bioinformatics and Computational Biology Graduate Program Iowa State University Ames IA USA Department of Biology Department of Chemistry Carthage College Kenosha WI USA Department of Computer Science Iowa State University Ames IA USA Department of Genetics Development and Cell Biology Bioinformatics and Computational Biology Graduate Program Iowa State University Ames IA USA Department of Computer Science Bioinformatics and Computational Biology Graduate Program Iowa State University Ames IA USA
We explore whether protein-RNA interfaces differ from non-interfaces in terms of their structural features and whether structural features vary according to the type of the bound RNA (e.g., mRNA, siRNA...etc), using a... 详细信息
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Decision fusion of circulating markers for breast cancer detection in premenopausal women
Decision fusion of circulating markers for breast cancer det...
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7th IEEE International Conference on bioinformatics and Bioengineering, BIBE
作者: Jesneck, Jonathan L. Mukherjee, Sayan Nolte, Loren W. Lokshin, Anna E. Marks, Jeffrey R. Lo, Joseph Department of Biomedical Engineering Department of Statistical Science Computational Biology and Bioinformatics Program Duke Advanced Imaging Labs. Institute for Genome Sciences and Policy Department of Computer Science Duke University Department of Electrical and Computer Engineering Division of Hematology/Oncology University of Pittsburgh School of Medicine University of Pittsburgh Cancer Institute Pittsburgh PA 15213 United States Department of Experimental Surgery Duke University Medical Center Medical Physics Graduate Program Duke University Durham NC 27708 United States
Current mammographic screeningfor breast cancer is less effective for younger women. To complement mammography for premenopausal women, we investigated the feasibility screening test using 98 blood serum proteins. Bec... 详细信息
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An information theoretic framework for eukaryotic gradient sensing  19
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20th Annual Conference on Neural Information Processing Systems, NIPS 2006
作者: Kimmel, Joseph M. Salter, Richard M. Thomas, Peter J. Computer Science Program Oberlin College Oberlin OH 44074 United States Department of Mathematics Biology and Cognitive Science Case Western Reserve University Cleveland OH 44106 United States Computational Neuroscience Graduate Program University of Chicago United States Center for Computation and Modeling United States
Chemical reaction networks by which individual cells gather and process information about their chemical environments have been dubbed "signal transduction" networks. Despite this suggestive terminology, the... 详细信息
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Comparison of experimental and computed protein anisotropic temperature factors
Comparison of experimental and computed protein anisotropic ...
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IEEE International Conference on bioinformatics and Biomedicine Workshops (BIBMW)
作者: Lei Yang Guang Song Robert L. Jernigan Program of Bioinformatics and Computational Biology Department of Biochemistry Biophysics and Molecular Biology Iowa State University Ames IA USA Department of Computer Science Iowa State University Ames IA USA Department of Biochemistry Biophysics and Molecular Biology L. H. Baker Center for Bioinformatics and Biological Statistics Iowa State University Ames IA USA
Because of its appealing simplicity, the anisotropic network model (ANM) has been widely accepted and applied to study many molecular motion problems: such as the molecular mechanisms of GroEL-GroES function, alloster... 详细信息
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AlzPharm: Integration of neurodegeneration data using RDF
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BMC bioinformatics 2007年 第SUPPL. 3期8卷 1-12页
作者: Lam, Hugo Y.K. Marenco, Luis Clark, Tim Gao, Yong Kinoshita, June Shepherd, Gordon Miller, Perry Wu, Elizabeth Wong, Gwendolyn T. Liu, Nian Crasto, Chiquito Morse, Thomas Stephens, Susie Cheung, Kei-Hoi Interdepartmental Program in Computational Biology and Bioinformatics Yale University New Haven CT United States Center for Medical Informatics Yale University New Haven CT United States Department of Anesthesiology Yale University New Haven CT United States Department of Neurobiology Yale University New Haven CT United States Department of Molecular Cellular and Developmental Biology Yale University New Haven CT United States Department of Genetics Yale University New Haven CT United States Department of Computer Science Yale University New Haven CT United States Initiative in Innovative Computing Harvard University Cambridge MA United States Massachusetts General Hospital Boston MA United States Alzheimer Research Forum Burlington MA United States Oracle Burlington MA United States
Background: Neuroscientists often need to access a wide range of data sets distributed over the Internet. These data sets, however, are typically neither integrated nor interoperable, resulting in a barrier to answeri... 详细信息
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Multi-task learning via conic programming  07
Multi-task learning via conic programming
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Proceedings of the 21st International Conference on Neural Information Processing Systems
作者: Tsuyoshi Kato Hisashi Kashima Masashi Sugiyama Kiyoshi Asai Graduate School of Frontier Sciences The University of Tokyo and Institute for Bioinformatics Research and Development (BIRD) Japan Science and Technology Agency (JST) Tokyo Research Laboratory IBM Research Department of Computer Science Tokyo Institute of Technology Graduate School of Frontier Sciences The University of Tokyo and AIST Computational Biology Research Center
When we have several related tasks, solving them simultaneously is shown to be more effective than solving them individually. This approach is called multi-task learning (MTL) and has been studied extensively. Existin...
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Identifying interaction sites in "Recalcitrant" proteins: Predicted protein and RNA binding sites in REV proteins of HIV-1 and EIAV agree with experimental data
Identifying interaction sites in "Recalcitrant" proteins: Pr...
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11th Pacific Symposium on Biocomputing 2006, PSB 2006
作者: Terribllini, Michael Lee, Jae-Hyung Yan, Changhui Jernigan, Robert L. Carpenter, Susan Honavar, Vasant Dobbs, Drena Bioinformatics and Computational Biology Graduate Program LH. Baker Center for Bioinformatics and Biological Statistics Iowa State University Ames IA 50010 United States Department of Computer Science Iowa State University Ames IA 50010 United States Department of Biochemistry Biophysics and Molecular Biology Iowa State University Ames IA 50010 United States Department of Genetics Development and Cell Biology Iowa State University Ames IA 50010 United States Artificial Intelligence Research Laboratory Center for Computational Intelligence Learning and Discovery Iowa State University Ames IA 50010 United States Department of Veterinary Microbiology and Pathology Washington State University Pullman WA. 99164 United States
Protein-protein and protein nucleic acid interactions are vitally important for a wide range of biological processes, including regulation or gene expression, protein synthesis, and replication and assembly of many vi... 详细信息
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computational identification of regulatory factors involved in MicroRNA transcription
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10th Panhellenic Conference on Informatics, PCI 2005
作者: Sethupathy, Praveen Megraw, Molly Barrasa, M. Inmaculada Hatzigeorgiou, Artemis G. Center for Bioinformatics University of Pennsylvania Philadelphia PA 19104 United States Department of Genetics School of Medicine University of Pennsylvania Philadelphia PA 19104 United States Department of Computer and Information Science School of Engineering University of Pennsylvania Philadelphia PA 19104 United States Department of Cancer Biology School of Medicine University of Pennsylvania Philadelphia PA 19104 United States Genomics and Computational Biology Graduate Group School of Medicine University of Pennsylvania Philadelphia PA 19104 United States
MicroRNAs (miRNAs) are non-coding RNA molecules that bind to and translationally repress mRNA transcripts. Currently ∼1345 miRNAs have been identified in at least twelve species through experimental and computational... 详细信息
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Network Analysis as a Grand Unifier in Biomedical Data science
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Biomedical Data science 1000年 第1期1卷 153-180页
作者: Patrick McGillivray Declan Clarke William Meyerson Jing Zhang Donghoon Lee Mengting Gu Sushant Kumar Holly Zhou Mark Gerstein 1Department of Molecular Biophysics and Biochemistry Yale University New Haven Connecticut 06520 USA email: mark@*** 2Program in Computational Biology and Bioinformatics Yale University New Haven Connecticut 06520 USA 3Department of Computer Science Yale University New Haven Connecticut 06520 USA
Biomedical data scientists study many types of networks, ranging from those formed by neurons to those created by molecular interactions. People often criticize these networks as uninterpretable diagrams termed hairba... 详细信息
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