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Pap Smear Medical Image Classification Using Deep Learning: A Systematic Review

Pap Smear Medical Image Classification Using Deep Learning: ...

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International Conference of computer and Informatics Engineering (IC2IE)

作者： Elvan Selvano Gregorius Natanael Elwirehardja Bens Pardamean Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia

Cervical cancer has been known as one of the most prevalent medical disorders globally and a leading cause of death. Early detection, particularly through Pap tests, plays a vital role in its prevention. Previous studies have leveraged machine learning and deep learning techniques to classify the medical images obtained from Pap tests. In this study, a Systematic Literature Review methodology was used to examine 15 relevant papers that have been filtered from queries to Google Scholar which have gone through 4 stages of filtering that include: identification, screening, eligibility, and inclusion. This study addresses two research questions regarding the datasets and deep learning techniques for classifying pap smear images in recent years. The performance of the models was analyzed and potential areas for improvements are suggested. The findings of this study reveal that the Herlev University Hospital and SIPaKMed datasets are the most used. The methodologies used by researchers range from machine learning techniques, transfer learning using Convolutional Neural Networks, and utilize state-of-the-art models with novel optimizing methodology. While there are exciting opportunities in the field, challenges include model generalization and interpretability.

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Exploring Recurrent Neural Network Models for Depression Detection Through Facial Expressions: A Systematic Literature Review

Exploring Recurrent Neural Network Models for Depression Det...

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International Conference of computer and Informatics Engineering (IC2IE)

作者： Brilyan Nathanael Rumahorbo Bens Pardamean Gregorius Natanael Elwirehardja Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia

Major Depressive Disorder (MDD) is a prevalent mental disorder, affecting a significant number of individuals, with estimates reaching 300 million cases worldwide. Currently, the diagnosis of this condition relies heavily on subjective assessments based on the experience of medical professionals. Therefore, researchers have turned to deep learning models to explore the detection of depression. The objective of this review is to gather information on detecting depression based on facial expressions in videos using deep learning techniques. Overall, this research found that RNN models achieved 7.22 MAE for AVEC2014. LSTM models produced 4.83 MAE for DAIC-WOZ, while GRU models achieved an accuracy of 89.77% for DAIC-WOZ. Features like Facial Action Units (FAU), eye gaze, and landmarks show great potential and need to be further analyzed to improve results. Analysis can include applying feature engineering techniques. Aggregation methods, such as mean calculation, are recommended as effective approaches for data processing. This Systematic Literature Review found that facial expressions do have relevant patterns related to MDD.

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Sentiment Analysis: Indonesia Netflix User's Comment Using Multiple Lexicon-Based Dictionaries

Sentiment Analysis: Indonesia Netflix User's Comment Using M...

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Intelligent Cybernetics Technology & Applications (ICICyTA), International Conference on

作者： Sebastianus Adi Santoso Mola Tiwuk Widiastuti Rosa V. K. Isabela Ohe Roma Andrea Stevens Karnyoto Bens Pardamean Faculty of Science and Engineering University of Nusa Cendana Kupang Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia

ISBN: (数字)9798331506490

ISBN: (纸本)9798331506506

A subscription movie streaming service from the United States, Netflix, has been present in Indonesia since 2016 and provides a wide variety of films without showing any single advertisements that can be viewed from anywhere, as long as there is access to the internet. Despite these advantages, many users have complained through the Google Play Store's comments column. Some of the common complaints include frequent buffering and connectivity issues, dissatisfaction with the limited selection of Indonesian movies, lack of subtitles for specific languages, or pricing concerns have also been raised. In this study developed two combined scenario methods using the InSet and SentiStrength_id dictionary to obtain better performance and compare them against independent InSet and SentiStrength_id. This study collected users' comments for the Netflix app in the Google Play Store as a dataset using web scraping techniques through the Google Collaboration tool. The dataset contains 3250 rows spanning the period from January 22, 2024, through June 6, 2024. To ensure proper processing of the text, data cleaning, lowercasing, normalization, tokenization, stemming, and stopwords removal are conducted. The results show that most user opinions are negative. The InSet dictionary has an accuracy of 92%, SentiStrength_id 78%, Combined scenario 1 is 87%, and scenario 2 reaches the highest among others which is 92.52%.

关键词： Sentiment analysis Dictionaries Accuracy Films Collaboration Pricing Motion pictures Tokenization Cleaning Internet

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A Systematic Literature Review of CNN Approaches in Classifying Brain Tumor

A Systematic Literature Review of CNN Approaches in Classify...

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International Conference of computer and Informatics Engineering (IC2IE)

作者： Aedentrisa Yasmanda Paulindino Bens Pardamean Gregorius Natanael Elwirehardja Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia

The ability of Convolutional Neural Networks (CNNs) to accurately discriminate between normal and tumorous brain tissues has been promising. The review focuses on the different CNN models, pre-processing methods, data augmentation, and Transfer Learning (TL) strategies used in this research. This Systematic Literature Review (SLR) collected the data from Google Scholar. The results of this study indicate that open-source datasets from Kaggle and Brain MRI Images for Brain Tumor Detection are the most used datasets. However, limited data and imbalanced class problems remain common challenges across various datasets. To overcome those challenges, using a larger dataset, oversampling, Generative Adversarial Network (GAN), federated learning, and Self-Supervised Learning (SSL) to handle the imbalance are the potential solution. Additionally, popular CNN architectures for brain tumor classification extensively use pre-trained models such as VGG16, VGG19, DenseNet121, DenseNet201, GoogleNet, ResNet-50, and Inception-v3. TL strategies are preferred, allowing CNNs to leverage knowledge from large datasets, improving generalization even with limited labeled data.

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Confidentiality. Integrity, and Availability (CIA) Approach for Private Dataset Management System Design

Confidentiality. Integrity, and Availability (CIA) Approach ...

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Information Technology and Digital Applications (ICITDA), IEEE International Conference on

作者： Mahmud Isnan Gregorius Natanael Elwirehardja Dedy Ariansyah Reza Rahutomo Bens Pardamean Computer Science Department School of Computer Science Bina Nusantara University Jakarta Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia Information Systems Department School of Information Systems Bina Nusantara University Jakarta Indonesia Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia

ISBN: (数字)9798331510732

ISBN: (纸本)9798331510749

Dataset management systems are essential for assisting research and development (R&D) organizations in applying data governance protocols, especially in managing the utilization of datasets. In R&D, datasets are vital sources for producing analysis, machine learning prediction, and supporting decision-making. As such, it is important to deploy dataset management systems with considerations regarding the aspects of Confidentiality, Integrity, and Availability (CIA) which is a design principle that emphasized information protection and collaboration facilitation among dataset users. The study proposed an analysis and a design for a dataset management system that takes CIA aspects into account. In the future, the proposed design will be utilized as a benchmark for building a dataset management system. In this study, the Waterfall method was adopted. A use case diagram, an ERD (Entity Relationship Diagram), and an activity diagram were constructed in the design stage. In the project implementation stage, the Laravel framework including Laravel Jetstream was considered to be used.

关键词： Protocols Data security Decision making Organizations Machine learning Encryption Protection Information technology Research and development System analysis and design

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Cancer Prediction Using Clinical and Genomic Data Fusion: A Systematic Review

Cancer Prediction Using Clinical and Genomic Data Fusion: A ...

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International Conference on Cybernetics and Intelligent System (ICORIS)

作者： Kelvin Julian Kuncahyo Setyo Nugroho Rudi Nirwantono Bens Pardamean Computer Science Department BINUS Graduate Program - Master of Computer Science Bina Nusantara University Jakarta Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta Indonesia Biotechnology Department Faculty of Engineering Bina Nusantara University Jakarta Indonesia

ISBN: (数字)9798331539603

ISBN: (纸本)9798331539610

This systematic review provides a comprehensive overview of the methods used to integrate genomic and clinical data in cancer prediction. The review includes 19 studies across various cancers, including breast, colorectal, melanoma, lung, pancreatic, and thyroid. The studies employed different methods to combine genomic and clinical data, including weighted polygenic risk scores, genetic and non-genetic risk scores, and different machine learning algorithms. The results show significant improvements in model prediction performance accuracy across multiple studies. The review highlights the potential benefits of integrating genetic and phenotypic information to improve disease risk prediction models and inform personalized healthcare strategies.

关键词： Accuracy Machine learning algorithms Genomics Data integration Medical services Predictive models Data models bioinformatics Cancer Systematic literature review

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The Impact of Different Modes of Augmented Reality Information in Assisted Aircraft Cable Assembly 1

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International Conference on Innovative Technologies in Intelligent Systems and Industrial Applications, CITISIA 2022

作者： Ariansyah, Dedy Xi, Khaizuo Erkoyuncu, John Ahmet Pardamean, Bens Bioinformatics and Data Science Research Centre Bina Nusantara University Jakarta11480 Indonesia School of Aerospace Transport and Manufacturing Cranfield University BedfordMK43 0AL United Kingdom Centre of Digital Engineering and Manufacturing School of Aerospace Transport and Manufacturing Cranfield University BedfordMK43 0AL United Kingdom Computer Science Department BINUS Graduate Program Master of Computer Science Program Bina Nusantara University Jakarta11480 Indonesia

ISBN: (数字)9783031290787

ISBN: (纸本)9783031290770

Aircraft avionics systems are complicated systems which involves high number of components and complex cable assembly procedure. To deal with this challenge, Augmented Reality (AR) has been proposed to be an effective method to improve assembly efficiency and to reduce error rates. In this paper, the authors developed AR-based guidance cable assembly and compare the impact of different modes of AR information. The results show that although AR outperformed the paper document assembly guidance, the design of AR information has distinct influence on the successful completion of the cables assembly process. © The Author(s), under exclusive license to Springer Nature Switzerland AG 2023.

关键词： Augmented reality

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Comparative analysis of deep learning models for detecting face mask 7

Comparative analysis of deep learning models for detecting f...

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7th International Conference on computer science and Computational Intelligence, CSCI 2022

作者： Ramadhan, M. Vickya Muchtar, Kahlil Nurdin, Yudha Oktiana, Maulisa Fitria, Maya Maulina, Novi Elwirehardja, Gregorius Natanael Pardamean, Bens Department of Electrical and Computer Engineering Universitas Syiah Kuala Banda Aceh23111 Indonesia Universitas Syiah Kuala Banda Aceh23111 Indonesia Microbiology Department School of Medicine Universitas Syiah Kuala Banda Aceh23111 Indonesia Bioinformatics and Data Science Research Center Bina Nusantara University Jakarta 11480 Indonesia Computer Science Department BINUS Graduate Program-Master of Computer Science Program Bina Nusantara University Jakarta 11480 Indonesia

The spread of Corona Virus Disease 19 (COVID-19) in Indonesia is still relatively high and has not shown a significant decrease. One of the main reasons is due to the lack of supervision on the implementation of health protocols such as wearing masks in daily activities. Recently, state-of-The-Art algorithms were introduced to automate face mask detection. To be more specific, the researchers developed various kinds of architectures for the detection of masks based on computer vision methods. This paper aims to evaluate well-known architectures, namely the ResNet50, VGG11, InceptionV3, EfficientNetB4, and YOLO (You Only Look Once) to recommend the best approach in this specific field. By using the MaskedFace-Net dataset, the experimental results showed that the EfficientNetB4 architecture has better accuracy at 95.77% compared to the YOLOv4 architecture of 93.40%, InceptionV3 of 87.30%, YOLOv3 of 86.35%, ResNet50 of 84.41%, VGG11 of 84.38%, and YOLOv2 of 78.75%, respectively. It should be noted that particularly for YOLO, the model was trained using a collection of MaskedFace-Net images that had been pre-processed and labelled for the task. The model was initially able to train faster with pre-Trained weights from the COCO dataset thanks to transfer learning, resulting in a robust set of features expected for face mask detection and classification. © 2022 Elsevier B.V.. All rights reserved.

关键词： Face recognition

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Systematic Literature Review: An Intelligent Pulmonary TB Detection from Chest X-Rays 1

Systematic Literature Review: An Intelligent Pulmonary TB De...

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1st International Conference on computer science and Artificial Intelligence, ICCSAI 2021

作者： Jimmy Cenggoro, Tjeng Wawan Pardamean, Bens Bina Nusantara University BINUS Graduate Program-Master of Computer Science Program Computer Science Department Jakarta11480 Indonesia Bina Nusantara University School of Computer Science Computer Science Department Jakarta11480 Indonesia Bina Nusantara University Bioinformatics and Data Science Research Center Jakarta11480 Indonesia

ISBN: (纸本)9781728133331

Tuberculosis (TB) is one of the top ten reasons for death from an infectious agent. Although TB is curable and preventable, delay in diagnosis and treatment can lead the patient to death. Advancements in computer-Aided diagnosis (CAD), particularly in medical images classification, significantly contribute to early TB detection. The current state-of-Art CAD for medical images classification applications using a method base on deep learning techniques. The problem faced in this deep learning technique is that, in general, it only uses a single modal for the model. In contrast, in medical practice, the data used for TB analysis not only focuses on images but also includes clinical data such as demographics, patient assessments, and lab test results. This systematic literature review describes different deep learning methods using single modal or multimodal techniques that combined images with other clinical data. We conducted a systematic search on Springer, PubMed, ResearchGate, and google scholar for original research leveraging deep learning for Pulmonary TB detection. © 2021 IEEE.

关键词： computer aided diagnosis

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Dental Disease Detection based on CNN for Panoramic Dental Radiographs 11

Dental Disease Detection based on CNN for Panoramic Dental R...

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11th IEEE International Conference on Intelligent Computing and Information Systems, ICICIS 2023

作者： El Bagoury, Manar Al-Shetairy, Mirna Ahmed, Omar Mehanny, Samah S Hamdy, Tassneem Omar, Gihan Akram, Marwan Mohamed, Rana Amr, Hebatullah Gad, Walaa Ain Shams University Faculty of Computer and Information Sciences Bioinformatics Program Cairo Egypt Ain Shams University Faculty of Computer and Information Sciences Computer Science Department Cairo Egypt Faculty of Dentistry Cairo and Galala Universities Oral Biology Department Cairo Egypt Cairo University Faculty of Dentistry Oral and Maxillofacial Radiology Department Cairo Egypt Future University in Egypt Faculty of Oral and Dental Medicine Oral Radiology Department Cairo Egypt Ain Shams University Faculty of Computer and Information Sciences Information Systems Department Cairo Egypt

ISBN: (纸本)9798350322101

Panoramic dental radiography is one of the examination tools frequently performed in dental clinics and hospitals as it captures a wide range of the dental region and its surroundings, but due to the complex structure of the dental area and lack of time, dentists focus on tiny parts of the images. With the help of Machine Learning, dentists can detect dental defects and anomalies faster and more accurately. In this study, a data set of 733 panoramic radiographs of adult patients was collected from the faculty of Oral and Dental Medicine, Future University, Egypt. Using a combination of pre-trained CNN architecture and a finetuned network, the collected panoramic radiographs were used to determine the optimal architecture. The purpose of this research was to develop a computer-aided detection system based on a finetuned CNN algorithm, and to evaluate the accuracy and usefulness of this system for the detection of proximal and occlusal caries, interdental and inter radicular alveolar bone loss, periapical lesions, and impacted teeth in panoramic radiographs. Different object detection models were tested to detect selected dental diseases that were found in the panoramic radiographs, and after a few experiments, the YOLOv5 architecture was proved to be the most optimal after achieving 0.61 mAP@0.5 and 0.28 mAP@ [0.5-0.95] for the total six classes. This is the best-achieved results to our knowledge. © 2023 IEEE.

关键词： Object detection

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