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检索条件"机构=Department of Computer Science The Bioinformatics Program"
582 条 记 录,以下是561-570 订阅
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Pursuit-evasion Voronoi diagrams in 1
Pursuit-evasion Voronoi diagrams in 1
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4th International Symposium on Voronoi Diagrams in science and Engineering 2007, ISVD 2007
作者: Cheung, Warren Evans, William Department of Computer Science University of British Columbia University of British Columbia Bioinformatics Program
We are given m pursuers and one evader. Each pursuer and the evader has an associated starting point in the plane, a maximum speed, and a start time. We also have a set of line segment obstacles with a total of n endp... 详细信息
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Correcting base-assignment errors in repeat regions of shotgun assembly
Correcting base-assignment errors in repeat regions of shotg...
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作者: Zhi, Degui Keich, Uri Pevzner, Pavel Heber, Steffen Tang, Haixu Bioinformatics Program University of California San Diego San Diego CA 92093 Department of Computer Science 4130 Upson Hall Cornell University Ithaca NY 14853 Department of Computer Science and Engineering University of California San Diego San Diego CA 92093 North Carolina State University Raleigh NC 27695-7566 School of Informatics Center for Genomics and Bioinformatics Indiana University Bloomington IN 47408
Accurate base-assignment in repeat regions of a whole genome shotgun assembly is an unsolved problem. Since reads in repeat regions cannot be easily attributed to a unique location in the genome, current assemblers ma... 详细信息
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Decision fusion of circulating markers for breast cancer detection in premenopausal women
Decision fusion of circulating markers for breast cancer det...
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7th IEEE International Conference on bioinformatics and Bioengineering, BIBE
作者: Jesneck, Jonathan L. Mukherjee, Sayan Nolte, Loren W. Lokshin, Anna E. Marks, Jeffrey R. Lo, Joseph Department of Biomedical Engineering Department of Statistical Science Computational Biology and Bioinformatics Program Duke Advanced Imaging Labs. Institute for Genome Sciences and Policy Department of Computer Science Duke University Department of Electrical and Computer Engineering Division of Hematology/Oncology University of Pittsburgh School of Medicine University of Pittsburgh Cancer Institute Pittsburgh PA 15213 United States Department of Experimental Surgery Duke University Medical Center Medical Physics Graduate Program Duke University Durham NC 27708 United States
Current mammographic screeningfor breast cancer is less effective for younger women. To complement mammography for premenopausal women, we investigated the feasibility screening test using 98 blood serum proteins. Bec... 详细信息
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Constrained RNA structural alignment: Algorithms and application to motif detection in the untranslated regions of Trypanosoma brucei mRNAs
Constrained RNA structural alignment: Algorithms and applica...
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7th IEEE International Conference on bioinformatics and Bioengineering, BIBE
作者: Khaladkar, Mugdha Bellofatto, Vivian Wang, Jason T. L. Patel, Vandanaben Nakayama, Marvin K. Department of Computer Science New Jersey Institute of Technology Newark NJ 07102 United States Department of Microbiology and Molecular Genetics University of Medicine and Dentistry of New Jersey-New Jersey Medical School International Center for Public Health 225 Warren Street Newark NJ 07103 United States Bioinformatics Program Department of Computer Science New Jersey Institute of Technology NJ 07102 United States
In this paper we propose a new method for aligning two RNA secondary structures by taking into account the presence of conserved RNA substructures, or constraints, in the alignment process. Our method allows the incor... 详细信息
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Structural characterization of RNA-binding sites of proteins: Preliminary results
Structural characterization of RNA-binding sites of proteins...
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IEEE International Conference on bioinformatics and Biomedicine Workshops (BIBMW)
作者: Fadi Towfic David C. Gemperline Cornelia Caragea Feihong Wu Drena Dobbs Vasant Honavar Bioinformatics and Computational Biology Graduate Program Iowa State University Ames IA USA Department of Biology Department of Chemistry Carthage College Kenosha WI USA Department of Computer Science Iowa State University Ames IA USA Department of Genetics Development and Cell Biology Bioinformatics and Computational Biology Graduate Program Iowa State University Ames IA USA Department of Computer Science Bioinformatics and Computational Biology Graduate Program Iowa State University Ames IA USA
We explore whether protein-RNA interfaces differ from non-interfaces in terms of their structural features and whether structural features vary according to the type of the bound RNA (e.g., mRNA, siRNA...etc), using a... 详细信息
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Comparison of experimental and computed protein anisotropic temperature factors
Comparison of experimental and computed protein anisotropic ...
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IEEE International Conference on bioinformatics and Biomedicine Workshops (BIBMW)
作者: Lei Yang Guang Song Robert L. Jernigan Program of Bioinformatics and Computational Biology Department of Biochemistry Biophysics and Molecular Biology Iowa State University Ames IA USA Department of Computer Science Iowa State University Ames IA USA Department of Biochemistry Biophysics and Molecular Biology L. H. Baker Center for Bioinformatics and Biological Statistics Iowa State University Ames IA USA
Because of its appealing simplicity, the anisotropic network model (ANM) has been widely accepted and applied to study many molecular motion problems: such as the molecular mechanisms of GroEL-GroES function, alloster... 详细信息
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AlzPharm: Integration of neurodegeneration data using RDF
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BMC bioinformatics 2007年 第SUPPL. 3期8卷 1-12页
作者: Lam, Hugo Y.K. Marenco, Luis Clark, Tim Gao, Yong Kinoshita, June Shepherd, Gordon Miller, Perry Wu, Elizabeth Wong, Gwendolyn T. Liu, Nian Crasto, Chiquito Morse, Thomas Stephens, Susie Cheung, Kei-Hoi Interdepartmental Program in Computational Biology and Bioinformatics Yale University New Haven CT United States Center for Medical Informatics Yale University New Haven CT United States Department of Anesthesiology Yale University New Haven CT United States Department of Neurobiology Yale University New Haven CT United States Department of Molecular Cellular and Developmental Biology Yale University New Haven CT United States Department of Genetics Yale University New Haven CT United States Department of Computer Science Yale University New Haven CT United States Initiative in Innovative Computing Harvard University Cambridge MA United States Massachusetts General Hospital Boston MA United States Alzheimer Research Forum Burlington MA United States Oracle Burlington MA United States
Background: Neuroscientists often need to access a wide range of data sets distributed over the Internet. These data sets, however, are typically neither integrated nor interoperable, resulting in a barrier to answeri... 详细信息
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Statistical Dependence in Biological Sequences
Statistical Dependence in Biological Sequences
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IEEE International Symposium on Information Theory
作者: Hasan Metin Aktulga Ioannis Kontoyiannis L. Alex Lyznik Lukasz Szpankowski Ananth Y. Grama Wojciech Szpankowski Department of Computer Scienc Purdue University West Lafayette IN U.S.A. Department of Informatics Athens University of Econ Business Athens Greece Department of Informatics Athens Univ of Econ & Business Athens Greece Pioneer Hi-Bred International Johnston IA USA Bioinformatics Program UCSD San Diego CA U.S.A. Department of Computer Science Purdue University West Lafayette IN U.S.A.
We demonstrate the use of information-theoretic tools for the task of identifying segments of biomolecules (DNA or RNA) that are statistically correlated. We develop a precise and reliable methodology, based on the no... 详细信息
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The generation challenge programme platform: Semantic standards and workbench for crop science
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International Journal of Plant Genomics 2008年 第1期2008卷 369601页
作者: Bruskiewich, Richard Senger, Martin Davenport, Guy Ruiz, Manuel Rouard, Mathieu Hazekamp, Tom Takeya, Masaru Doi, Koji Satoh, Kouji Costa, Marcos Simon, Reinhard Balaji, Jayashree Akintunde, Akinnola Mauleon, Ramil Wanchana, Samart Shah, Trushar Anacleto, Mylah Portugal, Arllet Ulat, Victor Jun Thongjuea, Supat Braak, Kyle Ritter, Sebastian Dereeper, Alexis Skofic, Milko Rojas, Edwin Martins, Natalia Pappas, Georgios Alamban, Ryan Almodiel, Roque Barboza, Lord Hendrix Detras, Jeffrey Manansala, Kevin Mendoza, Michael Jonathan Morales, Jeffrey Peralta, Barry Valerio, Rowena Zhang, Yi Gregorio, Sergio Hermocilla, Joseph Echavez, Michael Yap, Jan Michael Farmer, Andrew Schiltz, Gary Lee, Jennifer Casstevens, Terry Jaiswal, Pankaj Meintjes, Ayton Wilkinson, Mark Good, Benjamin Wagner, James Morris, Jane Marshall, David Collins, Anthony Kikuchi, Shoshi Metz, Thomas McLaren, Graham Van Hintum, Theo Crop Research Informatics Laboratory International Rice Research Institute (IRRI) DAPO Box 7777 Metro Manila Philippines Crop Research Informatics Laboratory International Maize and Wheat Improvement Center (CIMMYT) DF 06600 Mexico Apdo. Postal 6-641 Mexico Centre International de Recherche Agronomique Pour le Développement (CIRAD) 34398 Montpellier Cedex 5 Avenue Agropolis France Bioversity International 00057 Maccarese (Fiumicino) Rome Via dei Tre Denari 472/a Italy National Institute for Agrobiological Sciences (NIAS) Tsukuba Ibaraki 305-8602 Kannondai 2-1-2 Japan Empresa Brasileira de Pesquisa Agropecuaria (EMBRAPA) Brasilia DF 70770-900 Parque Estaçao Biologia Final W5 Norte Brazil Centro Internacional de la Papa (CIP) Lima 12 Avenida La Molina 1895 La Molina Peru International Crops Research Institute for the Semi-Arid Tropics Patancheru Andhra Pradesh 502324 India International Center for Agricultural Research in the Dry Areas Aleppo P.O. Box 5466 Syrian Arab Republic National Center for Genetic Engineering and Biotechnology 113 Thailand Science Park Klong Luang Pathumthani 12120 Phahonyothin Road Klong 1 Thailand Institute of Computer Science College of Arts and Sciences University of the Philippines Los Banos Laguna 4031 Philippines Department of Computer Science University of the Philippines Melchor Hall Diliman Quezon City 1101 Philippines National Center for Genome Resources Santa Fe NM 87505 2935 Rodeo Park Drive East United States Scottish Crop Research Institute Invergowrie Dundee DD2 5DA United Kingdom Department of Plant Breeding Cornell University Ithaca NY 14853 United States African Centre for Gene Technologies Lynnwood Ridge 0040 P.O. Box 75011 South Africa Department of Medical Genetics Faculty of Medicine University of British Columbia Vancouver BC V6T 1Z3 Canada School of Computing Science Simon Fraser Universtiy Burnaby BC V5A 1S6 8888 University Drive Canada Bioinformatics Graduate Program Genome Sciences Centre BC
The Generation Challenge programme (GCP) is a global crop research consortium directed toward crop improvement through the application of comparative biology and genetic resources characterization to plant breeding. A...
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Epileptic seizure detection
Epileptic seizure detection
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作者: Schuyler, Ronald White, Andrew Staley, Kevin Cios, Krzysztof J. Computational Bioscience Ph.D. Program UCDHSC United States University of Colorado United States American Epilepsy Society Society for Neuroscience United States Department of Neurology Massachusetts General Hospital Harvard Medical School United States Staley Lab. United States University of Colorado at Denver Health Sciences Center United States University of Colorado Bioenergetics Institute United States Data Mining and Bioinformatics Laboratory Turkey Polish Academy of Arts and Sciences Poland Dept. of Computer Science and Engineering University of Colorado at Denver Health Sciences Center P.O. Box 173364 Denver CO 80217-3364 United States
No abstract available
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