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检索条件"机构=Department of Computer Science and the Graduate Program of Computational Modeling"
141 条 记 录,以下是11-20 订阅
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The Fisher Geometry and Geodesics of the Multivariate Normals, without Differential Geometry
arXiv
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arXiv 2023年
作者: Lawson, Brodie A.J. Burrage, Kevin Mengersen, Kerrie Santos, Rodrigo Weber dos Centre for Data Science Queensland University of Technology Australia School of Mathematical Sciences Queensland University of Technology Australia ARC Centre of Excellence for Plant Success in Nature and Agriculture Australia Department of Computer Science University of Oxford United Kingdom Graduate Program in Computational Modeling Universidade Federal de Juiz de Fora Brazil
Choosing the Fisher information as the metric tensor for a Riemannian manifold provides a powerful yet fundamental way to understand statistical distribution families. Distances along this manifold become a compelling... 详细信息
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GranatumX:A Community-engaging, Modularized, and Flexible Webtool for Single-cell Data Analysis
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Genomics, Proteomics & Bioinformatics 2021年 第3期19卷 452-460页
作者: David G.Garmire Xun Zhu Aravind Mantravadi Qianhui Huang Breck Yunits Yu Liu Thomas Wolfgruber Olivier Poirion Tianying Zhao Cédric Arisdakessian Stefan Stanojevic Lana X.Garmire Department of Electrical Engineering&Computer Science University of MichiganAnn ArborMI 48109USA Epidemiology Program University of Hawaii Cancer CenterHonoluluHI 96813USA Department of Biostatistics University of MichiganAnn ArborMI 48109USA Department of Computational Medicine and Bioinformatics University of MichiganAnn ArborMI 48105USA Molecular Biosciences and Bioengineering Graduate Program University of Hawaii at ManoaHonoluluHI 96822USA
We present GranatumX,a next-generation software environment for single-cell RNA sequencing(scRNA-seq)data *** is inspired by the interactive webtool *** enables biologists to access the latest scRNA-seq bioinformatics... 详细信息
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Decomposition of dynamic transcriptomic responses during effector-triggered immunity reveals conserved responses in two distinct plant cell populations
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Plant Communications 2024年 第8期5卷 1-17页
作者: Xiaotong Liu Daisuke Igarashi Rachel A.Hillmer Thomas Stoddard You Lu Kenichi Tsuda Chad L.Myers Fumiaki Katagiri Department of Plant and Microbial Biology University of Minnesota-Twin CitiesSt PaulMN 55108USA Department of Computer Science and Engineering University of Minnesota-Twin CitiesMinneapolisMN 55455USA Bioinformatics and Computational Biology Graduate Program University of Minnesota-Twin CitiesMinneapolisMN 55455USA Institute for Innovation Ajinomoto Co.Inc.KawasakiJapan State Key Laboratory of Agricultural Microbiology Hubei Hongshan LaboratoryHubei Key Lab of Plant PathologyCollege of Plant Science and TechnologyHuazhong Agricultural UniversityWuhan 430070China Present address:225 S 6th St MinneapolisMN 55402USA Present address:Biotalys Inc.2520 Meridian Parkway Suite 480DurhamNC 27713USA Present address:Life Sciences Institute and Department of Cell and Developmental Biology University of Michigan Medical SchoolAnn ArborMI 48109USA
Rapid plant immune responses in the appropriate cells are needed for effective defense against *** transcriptome analysis is often used to describe overall immune responses,collection of transcriptome data with suffic... 详细信息
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Invasive or More Direct Measurements Can Provide an Objective Early-Stopping Ceiling for Training Deep Neural Networks on Non-invasive or Less-Direct Biomedical Data
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SN computer science 2023年 第2期4卷 161页
作者: Bartlett, Christopher W. Bossenbroek, Jamie Ueyama, Yukie McCallinhart, Patricia Peters, Olivia A. Santillan, Donna A. Santillan, Mark K. Trask, Aaron J. Ray, William C. Department of Pediatrics The Ohio State University College of Medicine Columbus OH United States The Steve and Cindy Rasmussen Institute for Genomic Medicine Battelle Center for Computational Biology The Abigail Wexner Research Institute at Nationwide Children’s Hospital Columbus OH United States Department of Computer Science and Engineering The Ohio State University College of Engineering Columbus OH United States Center for Cardiovascular Research The Abigail Wexner Research Institute at Nationwide Children’s Hospital Columbus OH United States Department of Obstetrics & Gynecology University of Iowa Hospitals & Clinics Iowa City IA United States The Interdisciplinary Graduate Program in Biophysics The Ohio State University Graduate School Columbus OH United States
Early stopping is an extremely common tool to minimize overfitting, which would otherwise be a cause of poor generalization of the model to novel data. However, early stopping is a heuristic that, while effective, pri... 详细信息
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Near-Optimal Pilot Assignment in Cell-Free Massive MIMO
arXiv
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arXiv 2023年
作者: Guedes, Raphael M. de Rezende, José F. Barbosa, Valmir C. Informatics and Computer Science Department State University of Rio de Janeiro RJ Rio de Janeiro20550-900 Brazil Systems Engineering and Computer Science Program Federal University of Rio de Janeiro RJ Rio de Janeiro21941-914 Brazil Graduate Program in Computational Sciences State University of Rio de Janeiro RJ Rio de Janeiro20550-900 Brazil
Cell-free massive MIMO systems are currently being considered as potential enablers of future (6G) technologies for wireless communications. By combining distributed processing and massive MIMO, they are expected to d... 详细信息
来源: 评论
Big data in healthcare:Conceptual network structure,key challenges and opportunities
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Digital Communications and Networks 2023年 第4期9卷 856-868页
作者: Leonardo B.Furstenaua Pedro Leivas Michele Kremer Sott Michael S.Dohan Jose Ricardo Lopez-Robles Manuel J.Cobo Nicola Luigi Bragazzi Kim-Kwang Raymond Choo Post-Graduate Program in Industrial Engineering Federal University of Rio Grande Do SulPorto Alegre90035-190Brazil University of Santa Cruz Do Sul Av.Independencia 2293Santa Cruz Do SulRSBrazil Business School Unisinos UniversityAv.Dr.Nilo Peçanha 160091330-002Porto AlegreBrazil Faculty of Business Administration Lakehead UniversityThunder BayOntarioCanada Autonomous University of Zacatecas Av.Ramon Lopez Velarde Col.CentroZacatecas98000Mexico Department of Computer Science and Artificial Intelligence Andalusian Research Institute in Data Science and Computational Intelligence(DaSCI)University of GranadaGranada 18071Spain York University ON M3J 1P3Canada Department of Information Systems and Cyber Security University of Texas at San AntonioSan AntonioTX78249USA
Big data is a concept that deals with large or complex data sets by using data analysis tools(e.g.,data mining,machine learning)to analyze information extracted from several sources *** data has attracted wide attenti... 详细信息
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State of the Art Models for Fake News Detection Tasks
State of the Art Models for Fake News Detection Tasks
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2020 IEEE International Conference on Informatics, IoT, and Enabling Technologies, ICIoT 2020
作者: Antoun, Wissam Baly, Fady Achour, Rim Hussein, Amir Hajj, Hazem American University of Beirut Electrical and Computer Engineering Department Beirut Lebanon Graduate Program in Computational Science American University of Beirut Beirut Lebanon
This paper presents state of the art methods for addressing three important challenges in automated fake news detection: fake news detection, domain identification, and bot identification in tweets. The proposed solut... 详细信息
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Survey and Improvement Strategies for Gene Prioritization with Large Language Models
arXiv
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arXiv 2025年
作者: Neeley, Matthew B. Qi, Guantong Wang, Guanchu Tang, Ruixiang Mao, Dongxue Liu, Chaozhong Pasupuleti, Sasidhar Yuan, Bo Xia, Fan Liu, Pengfei Liu, Zhandong Hu, Xia Jan and Dan Duncan Neurological Research Institute Texas Children’s Hospital Houston United States Graduate School of Biomedical Sciences Program in Quantitative and Computational Biosciences Baylor College of Medicine Houston United States Graduate School of Biomedical Sciences Program in Genetics and Genomics Baylor College of Medicine Houston United States Department of Computer Science Rice University Houston United States Department of Computer Science Rutgers University NJ United States Department of Pediatrics Baylor College of Medicine Houston United States Department of Molecular and Human Genetics Baylor College of Medicine Houston United States Human Genome Sequencing Center Baylor College of Medicine Houston United States Baylor Genetics Houston United States
Background Rare diseases can be difficult to diagnose due to limited patient data and broad genetic diversity. Despite the advances in variant prioritization tools, many rare disease cases remain undiagnosed. While la... 详细信息
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Biomedical data and AI
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science China Life sciences 2025年 第5期68卷 1536-1540页
作者: Hao Xu Shibo Zhou Zefeng Zhu Vincenzo Vitelli Liangyi Chen Ziwei Dai Ning Yang Luhua Lai Shengyong Yang Sergey Ovchinnikov Zhuoran Qiao Sirui Liu Chen Song Jianfeng Pei Han Wen Jianfeng Feng Yaoyao Zhang Zhengwei Xie Yang-Yu Liu Zhiyuan Li Fulai Jin Hao Li Mohammad Lotfollahi Xuegong Zhang Ge Yang Shihua Zhang Ge Gao Pulin Li Qi Liu Jing-Dong Jackie Han Peking-Tsinghua Center for Life Sciences (CLS) Academy for Advanced Interdisciplinary StudiesPeking University Center for Quantitative Biology (CQB) Academy for Advanced Interdisciplinary StudiesPeking University Peking University-Tsinghua University-National Institute of Biological Sciences Joint Graduate Program Academy for Advanced Interdisciplinary StudiesPeking University Department of Physics University of Chicago School of Life Sciences Southern University of Science and Technology Peking University Chengdu Academy for Advanced Interdisciplinary Biotechnologies College of Chemistry and Molecular Engineering Peking University Department of Biotherapy Cancer Center and State Key Laboratory of BiotherapyWest China HospitalSichuan University Department of Biology Massachusetts Institute of Technology Lambic Therapeutics Inc. Changping Laboratory Al for Science Institute Key Laboratory of Computational Neuroscience and Brain-Inspired Intelligence Fudan University Department of Obstetrics and Gynecology West China Second University HospitalSichuan University Peking University International Cancer Institute and Peking University-Yunnan Baiyao International Medical Institute and State Key Laboratory of Natural and Biomimetic Drugs Department of Molecular and Cellular PharmacologySchool of Pharmaceutical SciencesPeking University Health Science CenterPeking University Channing Division of Network Medicine Department of MedicineBrigham and Women's Hospital and Harvard Medical School Center for Artificial Intelligence and Modeling the Carl R.Woese Institute for Genomic BiologyUniversity of Illinois Urbana-Champaign Department of Genetics and Genome Sciences School of Medicine and Department of Computer and Data Sciences and Department of Population and Quantitative Health SciencesCase Western Reserve University Department of Biochemistry and Biophysics University of California Sanger Institute Department of Automation Tsinghua University State Key Laboratory of Multimodal Artificial Intelligence Systems I
The development of artificial intelligence(AI) and the mining of biomedical data complement each other. From the direct use of computer vision results to analyze medical images for disease screening, to now integratin...
来源: 评论
A Multi-phase Deep Learning Approach for Predicting HCC Response to TACE using Complete Computed Tomography
A Multi-phase Deep Learning Approach for Predicting HCC Resp...
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Data science and Engineering in Healthcare, Medicine and Biology, IEEE EMBS Special Topic Conference on
作者: Shun Cheng Chang Chien Fu Liu Marta Misztal Yi Hsien Hsieh Che Lin Graduate Institute of Communication Engineering National Taiwan University (NTU) Taiwan School of Electronic Engineering and Computer Science Queen Mary University of London UK Department of Electrical Engineering NTU Taiwan Center for Computational and Systems Biology and Center for Biotechnology NTU Taiwan Smart Medicine and Health Informatics Program NTU Taiwan
In this research study, we compare the predictive performance of two advanced deep learning-based models in order to provide a solution to TACE (Transarterial Chemoembolization) response prediction in HCC (Hepatocellu...
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