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Noise reduction in DNA microarray images based on digital path approach 5

Noise reduction in DNA microarray images based on digital pa...

引用

5th IFAC Symposium on Modelling and control in Biomedical Systems 2003

作者： Smolka, Bogdan Plataniotis, Konstantinos N. Lukac, Rastislav Venesanopoulos, Anastasios N. Department of Automatic Control Silesian University of Technology Akademicka J6 Str. Gliwice44-101 Poland Department of Electrical and Computer Engineering University of Toronto 10 King's College Road Toronto Canada Slovak Image Processing Center Jarkova 343 Dobsina049 25 Slovakia

In this work we apply the new noise reduction method for the enhancement of the images of gene chips. We demonstrate that the new technique is capable of reducing various kinds of noise present in microarray images and that it enables efficient spot location and estimation of the gene expression level due to the smoodiing effect and preservation of the spot edges. This paper contains the comparison of the new technique of noise reduction with the standard procedures used for the processing of vector valued images, as well as examples of the efficiency of the new algorithm when applied to typical cDNA microarray images. Copyright © 2003 IF AC.

关键词： Image enhancement

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An overview of software cybernetics

An overview of software cybernetics

引用

IEEE International Workshop on Software Technology and engineering Practice (STEP)

作者： Kai-Yuan Cai J.W. Cangussu R.A. DeCarlo A.P. Mathur Department of Automatic Control Beijing Aeronautics and Astronautics University Beijing China Department of Computer Science University of Texas Dallas Richardson TX USA Department of Electrical and Computer Engineering Purdue University West Lafayette IN USA Department of Computer Science Purdue University West Lafayette IN USA

Software cybernetics explores the interplay between software and control and is motivated by the fundamental question whether or not and how software behavior can be controlled. In this paper, we formulate the underlying motivations and ideas of software cybernetics and review various existing research topics in this emerging area, including feedback mechanisms in software processes, bisimulation and controllability, adaptive software, software synthesis, software test process control, and adaptive testing. We identify software rejuvenation and performance control, software fault-tolerance, logical foundation for control systems, and communication complexity for control systems as potential research topics. Several on-going research projects are also summarized.

关键词： Cybernetics Communication system control control systems Programmable control Adaptive control Software testing Communication system software Software performance Feedback controllability

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Document clustering using hierarchical SOMART neural network

Document clustering using hierarchical SOMART neural network

引用

International Joint Conference on Neural Networks (IJCNN)

作者： M.F. Hussin M. Kamel Department of Computer Science & Automatic Control Alexandria University Alexandria Egypt Department of Systems Design Engineering University of Waterloo Waterloo ONT Canada

Availability of large full-text document collections in electronic form has created a need for tools and techniques that assist users in organizing these collections. Document clustering is one of the popular methods used for this purpose. In this paper, we propose the neural network based document clustering method by using a hierarchically organized network built up from independent Self-Organizing Map (SOM) and Adaptive Resonance Theory (ART) neural networks. We present clustering results using the REUTERS corpus and show an improvement in clustering performance using both entropy and F-measure as evaluation measures.

关键词： Neural networks Subspace constraints Artificial neural networks Organizing Clustering methods computer science automatic control Entropy Information retrieval Search engines

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Design and experiments of a 6-dimensional spatial tracker for cheap hand motion measurements

Design and experiments of a 6-dimensional spatial tracker fo...

引用

IEEE International Symposium on Virtual Environments, Human-computer Interfaces and Measurement Systems (VECIMS)

作者： Il Hong Suh Myung Kwan Park Sanghoon Lee School of Electrical Engineering & Computer Science Hanyang University South Korea Department of Computer Control Engineering Dong Yang University South Korea

ISBN: (纸本)0780377850

This paper describes a design experience of a low-cost 6 DOF spatial tracker system where relative low accuracy and relatively long ranges, wireless communication will be achieved by means of low cost accelerometers and gyros with contemporary microprocessor. However, there are two key problems; one is the bias drift problem and the other is the single and double integration of acceleration signal suffers not only from noise but also from nonlinear effects caused by gravity. Several algorithms are proposed to cope with such problems, and verified by some successful experimental results.

关键词： Tracking Motion measurement Accelerometers Signal processing algorithms Microprocessors Acceleration Costs Virtual environment computer displays Transmitters

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Sigmoidal weighted vector directional filter

Sigmoidal weighted vector directional filter

引用

Lecture Notes in computer science

作者： Lukac, Rastislav Smolka, Bogdan Plataniotis, Konstantinos N. Venetsanopoulos, Anastasios N. Slovak Image Processing Center Jarkova 343 049 25 Dobsina Slovakia Department of Automatic Control Silesian University of Technology Akademicka 16 Str. 44-101 Gliwice Poland Edward S. Rogers Sr. Department of Electrical and Computer Engineering University of Toronto 10 King's College Road Toronto Canada

In this paper, we provide and analyze a sigmoidal optimization of a recently developed class of weighted vector directional filters (WVDFs) outputting the input multichannel sample associated with the minimum sum of weighted angular distances to other input samples. Because the WVDFs can perform a number of smoothing operations in dependence on the weight coefficients, the aim of this paper is to adapt the WVDF behavior to statistical properties of noise and original color image. The filtering results and the complete analysis of the sigmoidal function based WVDF optimization are also provided. © Springer-Verlag Berlin Heidelberg 2003.

关键词： Bandpass filters

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Composite systems control by combined math-analytical and FS/NN computing approach 3

Composite systems control by combined math-analytical and FS...

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3rd IFAC Workshop on automatic Systems for Building the Infrastructure in Developing Countries, DECOM-TT 2003

作者： Dimirovski, Georgi M. Jing, Yuan-Wei Zhao, Jun Zhang, Si-Ying Dogus University Department of Computer Engineering Faculty of Engineering Acibadem Kadiköy IstanbulTR-34722 Turkey SS Cyril and Methodius University Institute of Automation and Systems Eng Faculty of Electrical Engineering SkopjeMK-1000 Macedonia Northeastern University Institute of Control Science School of Information Science and Eng. Shenyang Liaoning China

A control systems engineering approach, employing a two-level overall system architecture and different but compatible formalisms for system representation on the upper and lower levels, has been investigated in detail. One design alternative is based on employing fuzzy-system approximators and solving for the adaptive tracking of the given, arbitrary, desired system outputs. The other alternative is based on state equations of composite systems and the use of neural-network approximators to deal with uncertainties and control adaptation. In both alternatives similarity property of subsystems has been exploited. Both designs can be implemented within the standard computer process control technology, and are therefore believed to be promising in applied systems engineering. Copyright © 2003 IFAC.

关键词： Fuzzy systems

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引用

IEEE International Conference on Image Processing

作者： B. Smolka K.N. Plataniotis R. Lukac A.N. Venetsanopoulos Department of Automatic Control Silesian University of Technology Poland The-Edward S. Rogers Sr. Department of Electrical and Computer Engineering University of Toronto Toronto ON Canada

In this paper a novel approach to the problem of impulsive noise reduction in color images based on the nonparametric density estimation is presented. The basic idea behind the new image filtering technique is the maximization of the similarities between pixels in a predefined filtering window. The new method is faster than the standard vector median filter (VMF) and preserves better edges and fine image details. Simulation results show that the proposed method outperforms standard algorithms of the reduction of impulsive noise in color images.

关键词： Colored noise Color Filters Filtering Pixel Noise reduction Strontium Educational institutions Tail Noise measurement

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New approach to the impulsive noise removal in microarray images 5

New approach to the impulsive noise removal in microarray im...

引用

5th IFAC Symposium on Modelling and control in Biomedical Systems 2003

作者： Lukac, Rastislav Smolka, Bogdan Plataniotis, Konstantinos N. Venetsanopoulos, Anastasios N. Slovak Image Processing Center Jarkova 343 Dobsina049 25 Slovakia Department of Automatic Control Silesian University of Technology Akademicka 16Str. Gliwice44-101 Poland Edward S. Rogers Sr. Department of Electrical and Computer Engineering University of Toronto 10 King's College Road Toronto Canada

In this paper a new method of impulsive noise reduction in microarray images is presented. The new technique is capable of attenuating impulsive noise, while preserving the sharpness of the image edges. Extensive simulations reveal that the new method outperforms significantly the standard techniques widely used in multivariate signal processing. In this work we apply the new noise reduction method for the enhancement of the images of the microarray chips. We demonstrate that the new technique is capable of reducing impulsive noise, which is very often present in the microarray images and that it enables efficient spot localization and estimation of the gene expression level, due to the smoothing effect and preservation of the spot edges. This paper contains the comparison of the efficiency of the new technique of noise reduction with the standard procedures used for the processing of vector valued images, as well as examples of the efficiency of the new algorithm when applied to typical microarray images. Copyright © 2003 IF AC.

关键词： Impulse noise

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Weighted vector median optimization 4

Weighted vector median optimization

引用

4th EURASIP Conference Focused on Video / Image Processing and Multimedia Communications, EC-VIP-MC 2003

作者： Lukac, R. Plataniotis, K.N. Smolka, B. Venetsanopoulos, A.N. Slovak Image Processing Center Jarkova 343 Dobsina049 25 Slovakia Edward S. Rogers Sr. Department of Electrical and Computer Engineering University of Toronto 10 King's College Road TorontoON Canada Department of Automatic Control Silesian University of Technology Akademicka 16 Str. Gliwice44-101 Poland

ISBN: (纸本)9531840547

In this paper, a vector generalization of weighted median optimization approaches is provided. The proposed optimized weighted vector median filters utilize the relationship between standard median filter and vector median filter and also take the advantage of the generalized adaptive optimization algorithms initially developed for weighted median filters. © 2003 Faculty of electrical engineering and Co.

关键词： Adaptive filtering

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A new robust iterative learning control algorithm for application on a gantry robot

A new robust iterative learning control algorithm for applic...

引用

International Conference on Emerging Technologies and Factory Automation (ETFA)

作者： J.J. Hatonen T.J. Harte D.H. Owens J.D. Ratcliffe P.L. Lewin E. Rogers Department of Automatic Control and Systems Engineering University of Sheffield Sheffield UK Systems Engineering Laboratory University of Oulu Finland Department of Electronics and Computer Science University of Southampton UK

In this paper a new robust steepest-descent algorithm for discrete-time iterative learning control is introduced for plant models with multiplicative uncertainty. A theoretical analysis of the algorithm shows that if a tuning parameter in the algorithm is selected to be sufficiently large, the algorithm will result in monotonic convergence if the plant uncertainty satisfies a positivity condition. This is a major improvement when compared to the standard steepest-descent algorithm, which lacks a mechanism for finding a balance between convergence speed and robustness. Experimental work on a gantry robot is performed to demonstrate that the algorithm results in near perfect tracking in the limit.

关键词： Robust control Iterative algorithms Robots Convergence Uncertainty Robustness Robotics and automation Systems engineering and theory automatic control Laboratories

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