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Single-molecule localization microscopy reveals the ultrastructural constitution of distal appendages in expanded mammalian centrioles

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Nature communications 2023年第1期14卷 1688页

作者： Ting-Jui Ben Chang Jimmy Ching-Cheng Hsu T Tony Yang Department of Physics National Taiwan University Taipei Taiwan. Department of Electrical Engineering National Taiwan University Taipei Taiwan. Nano Science and Technology Program Taiwan International Graduate Program Academia Sinica and National Taiwan University Taipei Taiwan. Department of Electrical Engineering National Taiwan University Taipei Taiwan. tonyyang@ntu.edu.tw. Graduate Institute of Biomedical Electronics and Bioinformatics National Taiwan University Taipei Taiwan. tonyyang@ntu.edu.tw.

Distal appendages (DAPs) are vital in cilia formation, mediating vesicular and ciliary docking to the plasma membrane during early ciliogenesis. Although numerous DAP proteins arranging a nine-fold symmetry have been studied using superresolution microscopy analyses, the extensive ultrastructural understanding of the DAP structure developing from the centriole wall remains elusive owing to insufficient resolution. Here, we proposed a pragmatic imaging strategy for two-color single-molecule localization microscopy of expanded mammalian DAP. Importantly, our imaging workflow enables us to push the resolution limit of a light microscope well close to a molecular level, thus achieving an unprecedented mapping resolution inside intact cells. Upon this workflow, we unravel the ultra-resolved higher-order protein complexes of the DAP and its associated proteins. Intriguingly, our images show that C2CD3, microtubule triplet, MNR, CEP90, OFD1, and ODF2 jointly constitute a unique molecular configuration at the DAP base. Moreover, our finding suggests that ODF2 plays an auxiliary role in coordinating and maintaining DAP nine-fold symmetry. Together, we develop an organelle-based drift correction protocol and a two-color solution with minimum crosstalk, allowing a robust localization microscopy imaging of expanded DAP structures deep into the gel-specimen composites.

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Bulk-plasmon-mediated free-electron radiation beyond the conventional formation time

arXiv

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arXiv 2022年

作者： Tay, Fuyang Lin, Xiao Shi, Xihang Chen, Hongsheng Kaminer, Ido Zhang, Baile Interdisciplinary Center for Quantum Information State Key Laboratory of Modern Optical Instrumentation ZJUHangzhou Global Science and Technology Innovation Center College of Information Science and Electronic Engineering Zhejiang University Hangzhou310027 China Department of Electrical and Computer Engineering Rice University HoustonTX77005 United States Applied Physics Graduate Program Smalley–Curl Institute Rice University HoustonTX77005 United States International Joint Innovation Center The Electromagnetics Academy Zhejiang University Zhejiang University Haining314400 China Department of Electrical Engineering Technion-Israel Institute of Technology Haifa32000 Israel Jinhua Institute of Zhejiang University Zhejiang University Jinhua321099 China Division of Physics and Applied Physics School of Physical and Mathematical Sciences Nanyang Technological University 637371 Singapore Centre for Disruptive Photonic Technologies Nanyang Technological University 637371 Singapore

Free-electron radiation is a fundamental photon emission process that is induced by fast-moving electrons interacting with optical media. Historically, it has been understood that, just like any other photon emission process, free-electron radiation must be constrained within a finite time interval known as the "formation time", whose concept is applicable to both Cherenkov radiation and transition radiation, the two basic mechanisms describing radiation from a bulk medium and from an interface, respectively. Here we reveal an alternative mechanism of free-electron radiation far beyond the previously defined formation time. It occurs when a fast electron crosses the interface between vacuum and a plasmonic medium supporting bulk plasmons. While emitted continuously from the crossing point on the interface — thus consistent with the features of transition radiation — the extra radiation beyond the conventional formation time is supported by a long tail of bulk plasmons following the electron’s trajectory deep into the plasmonic medium. Such a plasmonic tail mixes surface and bulk effects, and provides a sustained channel for electron-interface interaction. These results also settle the historical debate in Ferrell radiation, regarding whether it is a surface or bulk effect, from transition radiation or plasmonic oscillation. Copyright © 2022, The Authors. All rights reserved.

关键词： Plasmonics

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Air-liquid microfluidics-integrated surface-enhanced Raman spectroscopy for selective molecular adsorption and detection to achieve bacterial discrimination

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Biosensors and Bioelectronics 2025年 285卷 117576页

作者： Ku, Chi-Yao Chiang, Yu-Wei Hsu, Huai-Yuan Cheng, Ho-Wen Chen, Ko-Lun Han, Yin-Yi Wang, Juen-Kai Wang, Yuh-Lin Huang, Nien-Tsu Graduate Institute of Biomedical Electronics and Bioinformatics National Taiwan University Taipei Taiwan Institute of Atomic and Molecular Sciences Academia Sinica Taipei Taiwan Molecular Science and Technology Taiwan International Graduate Program Academia Sinica Taipei Taiwan International Graduate Program of Molecular Science and Technology National Taiwan University Taipei Taiwan Department of Anesthesiology National Taiwan University Hospital Taipei100229 Taiwan Department of Trauma National Taiwan University Hospital Taipei100229 Taiwan Center for Condensed Matter Sciences National Taiwan University Taipei Taiwan Center for Atomic Initiative for New Materials National Taiwan University Taipei Taiwan Department of Electrical Engineering National Taiwan University Taipei Taiwan

Bacterial discrimination is crucial for accurate microbiological diagnosis and timely antibiotic treatment. Surface-enhanced Raman spectroscopy (SERS) is an ideal technique due to its non-invasive, label-free molecular sensing capabilities. By analyzing bacterial supernatants, containing various purine derivatives, SERS can differentiate bacterial species based on their unique spectral distributions. However, the same bacterial species with different antibiotic resistance may secrete similar purine derivatives, differing only slightly in composition. Furthermore, each purine derivative may have a different molecular affinity to the SERS substrate, making it difficult to distinguish the exact molecular ratio. To improve SERS-based bacterial discrimination, we propose an air-liquid microfluidics-integrated SERS system (ALM-SERS) that selectively adsorbs and detects bacterial secretions. By taking features of precise microdroplet manipulation and contact area from microfluidics and features of selective molecular adsorption and fingerprints characterization from the SERS technique, we successfully perform a "sequential molecular adsorption" strategy to address the signal interference of complicated molecular mixtures in existing SERS methods. As a proof of concept, we first evaluate the molecular affinity of purine derivatives and then demonstrate the competitive analyte adsorption using adenine/cytosine and hypoxanthine/uracil sample mixtures. Finally, we tested six bacterial supernatants, including two Gram types and four strains with identical taxonomy but differing antibiotic resistance. Another six clinically isolated bacterial samples with different antibiotic resistance were also applied. Our results showed that a successful bacterial discrimination between similar species was not possible using a single SERS spectrum. In summary, the ALM-SERS system offers a powerful approach for bacterial discrimination, even when spectral differences are subtle. Beyond microb

关键词： Raman spectroscopy

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Passive Bias-Free Nonreciprocal Metasurfaces Based on Nonlinear Quasi-Bound States in the Continuum

arXiv

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arXiv 2022年

作者： Cotrufo, Michele Cordaro, Andrea Sounas, Dimitrios L. Polman, Albert Alù, Andrea Photonics Initiative Advanced Science Research Center City University of New York New YorkNY10031 United States Van der Waals-Zeeman Institute Institute of Physics University of Amsterdam Science Park 904 Amsterdam1098 XH Netherlands Center for Nanophotonics AMOLF Science Park 104 Amsterdam1098 XG Netherlands Department of Electrical and Computer Engineering Wayne State University DetroitMI48202 United States Physics Program Graduate Center of the City University of New York New YorkNY10016 United States

Nonreciprocal devices – in which light is transmitted with different efficiencies along opposite directions – are key technologies for modern photonic applications, yet their compact and miniaturized implementation remains an open challenge. Among different avenues, nonlinearity-induced nonreciprocity has attracted significant attention due to the absence of external bias and integrability within conventional material platforms. So far, nonlinearity-induced nonreciprocity has been demonstrated only in guided platforms using high-Q resonators. Here, we demonstrate ultrathin optical metasurfaces with large nonreciprocal response for free-space radiation based on silicon third-order nonlinearities. Our metasurfaces combine an out-of-plane asymmetry – necessary to obtain nonreciprocity – with in-plane broken symmetry, which finely tunes the radiative linewidth of quasi-bound states in the continuum (q-BICs). Third-order nonlinearities naturally occurring in silicon, engaged by q-BICs, are shown to enable over 10 dB of nonreciprocal transmission while maintaining less than 3 dB in insertion loss. The demonstrated devices merge the field of nonreciprocity with ultrathin metasurface technologies, offering an exciting functionality for signal processing and routing, communications, and protection of high-power laser cavities. © 2022, CC BY.

关键词： High power lasers

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Reply to “Comment on ‘Scattering Cancellation-Based Cloaking for the Maxwell-Cattaneo Heat Waves’”

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Physical Review Applied 2021年第5期15卷 058002-058002页

作者： M. Farhat S. Guenneau P.-Y. Chen A. Alù K.N. Salama Computer Electrical and Mathematical Science and Engineering (CEMSE) Division King Abdullah University of Science and Technology (KAUST) Thuwal 23955-6900 Saudi Arabia UMI 2004 Abraham de Moivre-CNRS Imperial College London London SW7 2AZ United Kingdom Department of Electrical and Computer Engineering University of Illinois at Chicago Chicago Illinois 60607 USA Photonics Initiative Advanced Science Research Center City University of New York New York New York 10031 USA Physics Program Graduate Center City University of New York New York New York 10016 USA

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The Multi-speaker Multi-style Voice Cloning Challenge 2021

arXiv

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arXiv 2021年

作者： Xie, Qicong Tian, Xiaohai Liu, Guanghou Song, Kun Xie, Lei Wu, Zhiyong Li, Hai Shi, Song Li, Haizhou Hong, Fen Bu, Hui Xu, Xin ASLP@NPU School of Computer Science Northwestern Polytechnical University China Department of Electrical and Computer Engineering National University of Singapore Singapore Tsinghua Shenzhen International Graduate School Tsinghua University Shenzhen China IQIYI Inc China Machine Listening Lab University of Bremen Germany Originbeat Inc China Beijing Shell Shell Technology Co. Ltd China

The Multi-speaker Multi-style Voice Cloning Challenge (M2VoC) aims to provide a common sizable dataset as well as a fair testbed for the benchmarking of the popular voice cloning task. Specifically, we formulate the challenge to adapt an average TTS model to the stylistic target voice with limited data from target speaker, evaluated by speaker identity and style similarity. The challenge consists of two tracks, namely few-shot track and one-shot track, where the participants are required to clone multiple target voices with 100 and 5 samples respectively. There are also two sub-tracks in each track. For sub-track a, to fairly compare different strategies, the participants are allowed to use only the training data provided by the organizer strictly. For sub-track b, the participants are allowed to use any data publicly available. In this paper, we present a detailed explanation on the tasks and data used in the challenge, followed by a summary of submitted systems and evaluation results. © 2021, CC BY.

关键词： Speech synthesis

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Intrinsic Exciton-Phonon Coupling and Tuning in ZnTe Nanowires Probed by Resonant Raman Scattering

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Physical Review Applied 2020年第1期13卷 011001-011001页

作者： Yingyan Yi Jason K. Marmon Yuanping Chen Fan Zhang Tao Sheng Priyalal S. Wijewarnasuriya Haitao Zhang Yong Zhang Department of Electrical and Computer Engineering University of North Carolina at Charlotte Charlotte North Carolina 28223 USA School of Science Wuhan University of Technology Wuhan Hubei 430070 China Nanoscale Science Graduate Program University of North Carolina at Charlotte Charlotte North Carolina 28223 USA US Army Research Laboratory Adelphi Maryland 20783 USA Optical Science and Engineering Graduate Program University of North Carolina at Charlotte Charlotte North Carolina 28223 USA Department of Mechanical Engineering and Engineering Science University of North Carolina at Charlotte Charlotte North Carolina 28223 USA

We show in ZnTe that the 2LO to 1LO resonant Raman intensity ratio, a measure of electron-phonon coupling (EPC), exhibits a much larger intrinsic value than that previously reported and minimal change from bulk to 30 nm nanowires. However, the ratio can be tuned extrinsically over one order in magnitude controllably either during or after growth, and thus, allows for the programing of EPC or quantum information in nanoscale devices. This work helps to understand a matter of controversy in the literature for more than three decades, regarding the EPC size dependence in nanostructures, and provides unambiguous experimental results for validating EPC theories with reduced dimensionality.

关键词： Crystal defects Electron-phonon coupling Excitons Optoelectronics Nanowires Semiconductor compounds Photoluminescence Raman spectroscopy

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Layer-dependent optically-induced spin polarization in InSe

arXiv

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arXiv 2022年

作者： Nelson, Jovan Stanev, Teodor K. Lebedev, Dmitry LaMountain, Trevor Tyler Gish, J. Zeng, Hongfei Shin, Hyeondeok Heinonen, Olle Watanabe, Kenji Taniguchi, Takashi Hersam, Mark C. Stern, Nathaniel P. Applied Physics Program Northwestern University EvanstonIL60208 United States Department of Physics and Astronomy Northwestern University EvanstonIL60208 United States Department of Material Science & Engineering Northwestern University EvanstonIL60208 United States Computational Science Division Argonne National Laboratory LemontIL60439 United States Material Science Division Argonne National Laboratory LemontIL60439 United States Research Center for Functional Materials National Institute for Materials Science 1-1 Namiki Tsukuba305-0044 Japan International Center for Materials Nanoarchitectonics National Institute for Materials Science 1-1 Namiki Tsukuba305-0044 Japan Department of Chemistry Northwestern University EvanstonIL60208 United States Department of Electrical Engineering and Computer Science Northwestern University EvanstonIL60208 United States

Optical control of spin in semiconductors has been pioneered using nanostructures of III-V and II-VI semiconductors, but the emergence of two-dimensional van der Waals materials offers an alternative low-dimensional platform for spintronic phenomena. Indium selenide (InSe), a group-III monochalcogenide van der Waals material, has shown promise for opto-electronics due to its high electron mobility, tunable direct bandgap, and quantum transport. In addition to these confirmed properties, there are predictions of spin-dependent optical selection rules suggesting potential for all-optical excitation and control of spin in a two-dimensional layered material. Despite these predictions, layer-dependent optical spin phenomena in InSe have yet to be explored. Here, we present measurements of layer-dependent optical spin dynamics in few-layer and bulk InSe. Polarized photo-luminescence reveals layer-dependent optical orientation of spin, thereby demonstrating the optical selection rules in few-layer InSe. Spin dynamics are also studied in many-layer InSe using time-resolved Kerr rotation spectroscopy. By applying out-of-plane and in-plane static magnetic fields for polarized emission measurements and Kerr measurements, respectively, the g-factor for InSe was extracted. Further investigations are done by calculating precession values using a k·p model, which is supported by ab-initio density functional theory. Comparison of predicted precession rates with experimental measurements highlights the importance of excitonic effects in InSe for understanding spin dynamics. Optical orientation of spin is an important prerequisite for opto-spintronic phenomena and devices, and these first demonstrations of layer-dependent optical excitation of spins in InSe lay the foundation for combining layer-dependent spin properties with advantageous electronic properties found in this material. Copyright © 2022, The Authors. All rights reserved.

关键词： Spin dynamics

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Interaction-driven transport of dark excitons in 2D semiconductors with phonon-mediated optical readout

arXiv

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arXiv 2022年

作者： Chand, Saroj B. Woods, John M. Quan, Jiamin Mejia, Enrique Taniguchi, Takashi Watanabe, Kenji Alù, Andrea Grosso, Gabriele Photonics Initiative Advanced Science Research Center City University of New York New YorkNY10031 United States International Center for Materials Nanoarchitectonics National Institute for Materials Science 1-1 Namiki Tsukuba305-0044 Japan Research Center for Functional Materials National Institute for Materials Science 1-1 Namiki Tsukuba305-0044 Japan Department of Electrical Engineering City College of the City University of New York New YorkNY10031 United States Physics Program Graduate Center City University of New York New YorkNY10016 United States

The growing field of quantum information technology requires propagation of information over long distances with efficient readout mechanisms. Excitonic quantum fluids have emerged as a powerful platform for this task due to their straightforward electro-optical conversion. In two-dimensional transition metal dichalcogenides, the coupling between spin and valley provides exciting opportunities for harnessing, manipulating and storing bits of information. However, the large inhomogeneity of single layers cannot be overcome by the properties of bright excitons, hindering spin-valley transport. Nonetheless, the rich band structure supports dark excitonic states with strong binding energy and longer lifetime, ideally suited for long-range transport. Here we show that dark excitons can diffuse over several micrometers and prove that this repulsion-driven propagation is robust across non-uniform samples. The long-range propagation of dark states with an optical readout mediated by chiral phonons provides a new concept of excitonic devices for applications in both classical and quantum information technology. Copyright © 2022, The Authors. All rights reserved.

关键词： Sulfur compounds

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Terahertz cavity magnon polaritons

arXiv

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arXiv 2023年

作者： Kritzell, T. Elijah Baydin, Andrey Tay, Fuyang Rodriguez, Rodolfo Nojiri, Hiroyuki Everitt, Henry O. Barsukov, Igor Kono, Junichiro Department of Electrical and Computer Engineering Rice University HoustonTX77005 United States Applied Physics Graduate Program Smalley-Curl Institute Rice University HoustonTX77005 United States Smalley-Curl Institute Rice University HoustonTX77005 United States Physics and Astronomy University of California RiversideCA92521 United States Institute for Materials Research Tohoku University Sendai980-8577 Japan DEVCOM Army Research Laboratory-South HoustonTX77005 United States Department of Physics and Astronomy Rice University HoustonTX77005 United States Department of Material Science and NanoEngineering Rice University HoustonTX77005 United States

Hybrid light-matter coupled states, or polaritons, in magnetic materials have attracted significant attention due to their potential for enabling novel applications in spintronics and quantum information processing. However, most studies to date have been carried out for ferromagnetic materials with magnon excitations at gigahertz frequencies. Here, we have investigated strong resonant photon-magnon coupling at frequencies above 1 terahertz for the first time in a prototypical room-temperature antiferromagnetic insulator, NiO, inside a Fabry-Pérot cavity. The cavity was formed by the crystal itself when it was thinned down to an optimized thickness. By using terahertz time-domain spectroscopy in high magnetic fields up to 25 T, we swept the magnon frequency through Fabry-Pérot cavity modes and observed photon-magnon anticrossing behavior, demonstrating clear vacuum Rabi splittings exceeding the polariton linewidths. These results show that NiO is a promising platform for exploring antiferromagnetic spintronics and cavity magnonics in the terahertz frequency range. Copyright © 2023, The Authors. All rights reserved.

关键词： Polariton

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