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A sample identification and tracking system for biobanks

A sample identification and tracking system for biobanks

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2009 22nd IEEE International Symposium on computer-Based Medical Systems, CBMS 2009

作者： Zarabzadeh, Atieh Hayati, Farzad William G Watson, R. Bradley, Geoff Grimson, Jane Centre for Health Informatics Department of Computer Science Trinity College Dublin United States The Department of Electronic Electrical and Computer Engineering University of Birmingham United Kingdom UCD School of Medicine and Medical Science UCD Conway Institute of Biomo Lecular and Biomedical Research University College Dublin United States Trinity Centre for High Performance Computing Trinity College Dublin United States

ISBN: (纸本)9781424448784

The discovery of biomarkers and the underlying causes of diseases are enabled through the analysis of biological samples and data stored in biobanks. Biological samples and their associated data are expensive to collect and maintain, and it is important to store and manage them efficiently. During processing, samples and data go through a number of procedures and techniques, which are often in different locations and by individuals with different access permissions. It is essential to maintain the link between the samples and their associated data throughout the processes they undergo. This paper presents a novel system of tracking samples and data from collection through processing to storage and retrieval, which is based on Radio Frequency Identification (RFID) technology. This system ensures the security and reliability of sample data as well as locationindependent recording and updating of sample data, as they move along the workflow. ©2009 IEEE.

关键词： Radio frequency identification (RFID)

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Optical resonance of nanometer scale bow-tie antenna and bow-tie shaped aperture antenna

Optical resonance of nanometer scale bow-tie antenna and bow...

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Asia-Pacific Conference on Microwave

作者： Yu-Ming Wu Le-Wei Li Bo Liu Department of Electrical and Computer Engineering National University of Singapore Singapore Data Storage Institute Agency for Science Technology and Research Singapore

In this paper, the nanometer scale bow-tie antenna and its geometrically complementary bow-tie shaped aperture antenna are proposed and discussed focusing on their optical resonance characteristics. To demonstrate such structures, the finite integration technique is developed in broad band calculations especially in the visible and infrared region. Characterized by surface plasmon resonance, localized strong field are found at the separation gap of the bow-tie antenna, thus providing satisfying near-field confinement and enhancement. In addition, the resonant properties depending on the effects of the geometrical parameters of length and gap distance are systematical studied. Furthermore, comparison of the performances between the two structures is presented for the first time. This investigation can be applied to near-field optical detection or imaging, scanning probe microscopy, lithography and optical manipulation, which has a promising prospect for nanoantennas.

关键词： Aperture antennas Resonance Optical sensors Plasmons Dipole antennas Geometrical optics Optical surface waves Optical devices Optical microscopy Frequency

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Femtosecond laser irradiation for functional micro-/nanostructure fabrication

Femtosecond laser irradiation for functional micro-/nanostru...

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Pacific Rim Conference on Lasers and Electro-Optics (CLEO/Pacific Rim)

作者： Minghui Hong Zaichun Chen Min Tang Luping Shi Tow Chong Chong Department of Electrical & Computer Engineering National University of Singapore Singapore Data Storage Institute Agency for Science Technology and Research Singapore Data Storage Institute Agency for Science Technology and Research (ASTAR) Singapore

Femtosecond laser is a unique processing tool to make micro-/nanostructures on heat sensitive bio-polymer film & glass substrate, to create 3D structures inside glass, to achieve 20-nm nanostructuring and large-ar... 详细信息

ISBN: (纸本)9781424438303

关键词： Optical device fabrication Laser beams Ultrafast optics Glass computer numerical control Laser theory Substrates Biomedical optical imaging Nonlinear optics Optical films

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Measuring and compensating for process mismatch-induced, reference spurs in phase-locked loops using a sub-sampled DSP

Measuring and compensating for process mismatch-induced, ref...

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IEEE International Symposium on Circuits and Systems (ISCAS)

作者： Gao Zhuo Divya Kesharwani Patrick Chiang Hu Weiwu Institute of Computing Technology Chinese Academy and Sciences Beijing China Electrical Engineering and Computer Science Department Oregon State University Corvallis OR USA

ISBN: (纸本)9781424438273

A DSP method based on sub-sampling followed by M-point FFT of the sub-sampled signal is used to reduce the phase-locked loop's reference spur. To validate the system's effectiveness a digital calibration loop in SIMULINK is designed. The results show that the reference spur can be improved by 22 dBc with a 1% residual current mismatch and a 1 nA net value of leakage current.

关键词： Phase measurement Phase locked loops Digital signal processing Charge pumps Voltage-controlled oscillators Phase frequency detector Leakage current Clocks Circuit optimization Tuning

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A low latency transceiver macro with robust design technique for processor interface

A low latency transceiver macro with robust design technique...

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IEEE Asian Conference on Solid-State Circuits (ASSCC)

作者： Zhang Feng Yang Yi Yang Zongren Patrick Chiang Hu Weiwu Institute of Computing Technology Chinese Academy and Sciences Beijing China Electrical Engineering and Computer Science Department Oregon State University Corvallis OR USA

This paper describes a 65 nm 16-bit parallel transceiver IP macro, whose bandwidth is 4.8 GByte/s with 5 pf load including the HBM 2000v ESD protection. Equalizers and CDR modules, CRC checkers and 8b/10b encoders are not added in the design for reducing the latency and the whole latency is 7 ns without cables. Since the transceiver has many robust features including a PVT independent PLL with calibrations, the low skew differential clock tree, a stable current mode driver with common mode feedback. The transceiver can tolerance 20% power supply variations and work properly at different process corners and the extreme temperatures. The transceiver can be applied for the interface of sub-100 nm high performance processors which require low latency and high stability. The transceiver shows a BER less than 10 -15 at 3 Gb/s/pin.

关键词： Delay Transceivers Robustness Process design Bandwidth Electrostatic discharge Protection Equalizers Cyclic redundancy check Cables

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Optical antennas and their potential applications to 10 terabit/in2 recording

Optical antennas and their potential applications to 10 tera...

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Optical data Storage

作者： Haifeng Wang Chong Tow Chong Luping Shi Agency of Science Technology and Research Data Storage Institute Singapore Optical Crystal Laboratory Department of Electrical & Computer Engineering National University of Singapore Singapore

We investigated different types of optical antennas, studied the polarization status of light in the near field of resonant optical antennas and proposed to use rectangular boundary bowtie aperture optical antenna for... 详细信息

关键词： Optical films Optical refraction Optical variables control Aperture antennas Optical recording Resonance Optical polarization Lenses Optical surface waves Plasmons

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Animatable face models from uncalibrated input pictures

Animatable face models from uncalibrated input pictures

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International Conference on Telecommunications (ConTEL)

作者： M. Fratarcangeli M. Andolfi K. Stankovic I.S. Pandzic Department of Computer and Systems Science University of Roma La Sapienza Rome Italy Department of Electrical Engineering Image Coding Group Linköping Institute of Technology Linkoping Sweden Faculty of Electrical Engineering and Computing Department of Telecommunications University of Zagreb Zagreb Croatia

In networked virtual environments, videoconferences or chatting over the Internet users are often graphically represented by virtual characters. Modeling realistic virtual heads of users suitable for animation implies a heavy artistic effort and resource cost. This paper introduces a system that generates a 3D model of a real human head with a little human intervention. The system receives five input orthogonal photographs of the human head and a generic template 3D model. It requires manual annotation of 94 feature points on each photograph. The same set of feature points must be selected on the template model in a preprocessing step that is done only once. computing process consists of two phases: a morphing and a coloring phase. In the morphing phase the template model is morphed in two steps using a radial basis function (RBF) to take a shape similar to the shape of the real human head. In the coloring phase the deformed model is colored using the input photographs based on a cubemap projection, which leads to a realistic appearance of the model while allowing for a real time performance. We show the use of the output model by automatically copying facial motions from the template model to the deformed model, while preserving the compliance of the motion to the MPEG-4 FBA standard.

关键词： Facial animation Humans Deformable models Head Face Principal component analysis Image databases Spatial databases Active shape model computer networks

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Planning fireworks trajectories for steerable medical needles to reduce patient trauma

Planning fireworks trajectories for steerable medical needle...

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2009 IEEE/RSJ International Conference on Intelligent Robots and Systems

作者： Jijie Xu Vincent Duindam Ron Alterovitz Jean Pouliot J. Adam M. Cunha I-Chow Hsu Ken Goldberg B. Thomas Golisano College of Computing and Information Science Rochester Institute of Technology USA Department of Electrical Engineering and Computer Science University of California Berkeley USA Department of Computer Science North Carolina State University Chapel Hill USA Helen Diller Family Comprehensive Cancer Center University of California San Francisco USA Department of Industrial Engineering and Operations Research and the Department of Electrical Engineering and Computer Science University of California Berkeley USA

Accurate insertion of needles to targets in 3D anatomy is required for numerous medical procedures. To reduce patient trauma, a ¿fireworks¿ needle insertion approach can be used in which multiple needles are inserted from a single small region on the patient's skin to multiple targets in the tissue. In this paper, we explore motion planning for ¿fireworks¿ needle insertion in 3D environments by developing an algorithm based on Rapidly-exploring Random Trees (RRTs). Given a set of targets, we propose an algorithm to quickly explore the configuration space by building a forest of RRTs and to find feasible plans for multiple steerable needles from a single entry region. We present two path selection algorithms with different optimality considerations to optimize the final plan among all feasible outputs. Finally, we demonstrate the performance of the proposed algorithm with a simulation based on a prostate cancer treatment environment.

关键词： Trajectory Needles Space exploration Skin Anatomy Prostate cancer Path planning Kinematics Surface treatment Intelligent robots

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Reports of the AAAI 2009 spring symposia

Reports of the AAAI 2009 spring symposia

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作者： Bao, Jie Bojars, Uldis Choudhury, Tanzeem Ding, Li Greaves, Mark Kapoor, Ashish Louchart, Sandy Mehta, Manish Nebel, Bernhard Nirenburg, Sergei Oates, Tim Roberts, David L. Sanfilippo, Antonio Stojanovic, Nenad Stubbs, Kristen Thomaz, Andrea L. Tsui, Katherine Woelfl, Stefan Tetherless World Constellation Rensselaer Polytechnic Institute United States Social Software Unit of DERI Galway Ireland Computer Science Department Dartmouth College United States Knowledge Systems at Vulcan Inc United States Adaptive Systems and Interaction Group Microsoft Research Redmond United States School for Mathematics and Computer Sciences Heriot-Watt University United Kingdom School ot Interactive Computing Georgia Institute of Technology United States Department of Computer Science University of Freiburg Germany Computer Science and Electrical Engineering Department University of Maryland Baltimore County United States Pacific Northwest National Laboratory Richland WA United States University of Karlsruhe Germany IRobot Corporation United States University of Massachusetts Lowell United States

The Association for the Advancement of Artificial Intelligence, in cooperation with Stanford University's department of computer science, was pleased to present the 2009 Spring Symposium Series, held Monday through Wednesday, March 23-25, 2009, at Stanford University. The titles of the nine symposia were Agents That Learn from Human Teachers, Benchmarking of Qualitative Spatial and Temporal Reasoning Systems, Experimental Design for Real- World Systems, Human Behavior Modeling, Intelligent Event Processing, Intelligent Narrative Technologies II, Learning by Reading and Learning to Read, Social Semantic Web: Where Web 2.0 Meets Web 3.0, and Technosocial Predictive Analytics. The goal of the Agents That Learn from Human Teachers symposium was to investigate how we can enable software and robotics agents to leam from real-time interaction with an everyday human partner. The aim of the Benchmarking of Qualitative Spatial and Temporal Reasoning Systems symposium was to initiate the development of a problem repository in the field of qualitative spatial and temporal reasoning and identify a graded set of challenges for future midterm and long-term research. The Experimental Design symposium discussed the challenges of evaluating AI systems. The Human Behavior Modeling symposium explored reasoning methods for understanding various aspects of human behavior, especially in the context of designing intelligent systems that interact with humans. The Intelligent Event Processing symposium discussed the need for more Al-based approaches in event pro-cessing and defined a kind of research agenda for the field, coined as intelligent complex event processing (iCEP). The Intelligent Narrative Technologies IIAAAI symposium discussed innovations, progress, and novel techniques in the research domain. The Learning by Reading and Learning to Read symposium explored two aspects of making natural language texts semantically accessible to, and processable by, machines. The Social Semantic

关键词： Benchmarking

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AAAI 2008 workshop reports

AAAI 2008 workshop reports

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作者： Anand, Sarabjot Singh Bunescu, Razvan Carvcdho, Vitor Chomicki, Jan Conitzer, Vincent Cox, Michael T. Dignum, Virginia Dodds, Zachary Dredze, Mark Furcy, David Gabrilovich, Evgeniy Göker, Mehmet H. Guesgen, Hans Hirsh, Haym Jannach, Dietmar Junker, Ulrich Ketter, Wolfgang Kobsa, Alfred Koenig, Sven Lau, Tessa Lewis, Lundy Matson, Eric Metzler, Ted Mihalcea, Rada Mobasher, Bamshad Pineau, Joelle Poupart, Pascal Raja, Anita Ruml, Wheeler Sadeh, Norman Shani, Guy Shapiro, Daniel Smith, Trey Taylor, Matthew E. Wagstaff, Kiri Walsh, William Zhou, Rong Department of Computer Science University of Warwick United Kingdom School of Electrical Engineering and Computer Science Ohio University United States Microsoft Live Labs United States computer science and engineering University at Buffalo United States Computer science and economics Duke University United States Intelligent Computing group of BBN Technologies Utrecht University Netherlands Department of Computer science Harvey Mudd College United States University of Pennsylvania United States University of Wisconsin United States Yahoo Research PricewaterhouseCoopers Center for Advanced Research United States Department of Computer science School of Engineering and Advanced Technology Massey University New Zealand Departent of Computer science Rutgers University United States Department of Computer Science Dortmund University of Technology. Germany ILOG Rotterdam School of Management Erasmus University Netherlands Donald Bren School of Information and Computer Sciences University of California Irvine United States Depatrment of Computer science University of Southern California United States IBM Almaden Research Center United States Department of Computer Information Technology Southern New Hampshire University United States Computer and Information Technology Program College of Technology Purdue University United States Hughes Program for Religion and Science Dialogue Oklahoma City University United States Department of Computer Science and Engineering University of North Texas United States School of Computing DePaul University United States Department of Computer Science McGill University Canada School of Computer Science University of Waterloo Canada Department of Software and Information Systems University of North Carolina Charlotte United States University of New Hampshire United States Microsoft Research Institute for the Study of Learning and Expertise Applied Reactivity Inc. United States NASA Ames Research Center Carnegie Mellon University West

AAAI was pleased to present the AAAI-08 Workshop Program, held Sunday and Monday, July 13-14, in Chicago, Illinois, USA. The program included the following 15 workshops: Advancements in POMDP Solvers;AI Education Workshop Colloquium;Coordination, Organizations, Institutions, and Norms in Agent Systems, Enhanced Messaging;Human Implications of Human-Robot Interaction;Intelligent Techniques for Web Personalization and Recommender Systems;Metareasoning: Thinking about Thinking;Multidisciplinary Workshop on Advances in Preference Handling;Search in Artificial Intelligence and Robotics;Spatial and Temporal Reasoning;Trading Agent Design and Analysis;Transfer Learning for Complex Tasks;What Went Wrong and Why: Lessons from AI Research and Applications;and Wikipedia and Artificial Intelligence: An Evolving Synergy. Copyright © 2009, Association for the Advancement of Artificial Intelligence. All rights reserved.

关键词： Human robot interaction

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