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Physical Review E 2013年第6期88卷 062151-062151页

作者： Yoav Kallus Étienne Marcotte Salvatore Torquato Princeton Center for Theoretical Science Princeton University Princeton New Jersey 08544 USA Department of Physics Princeton University Princeton New Jersey 08544 USA Department of Chemistry Princeton University Princeton New Jersey 08544 USA Program in Applied and Computational Mathematics Princeton University Princeton New Jersey 08544 USA Princeton Institute of the Science and Technology of Materials Princeton University Princeton New Jersey 08544 USA

We generate and study an ensemble of isostatic jammed hard-sphere lattices. These lattices are obtained by compression of a periodic system with an adaptive unit cell containing a single sphere until the point of mechanical stability. We present detailed numerical data about the densities, pair correlations, force distributions, and structure factors of such lattices. We show that this model retains many of the crucial structural features of the classical hard-sphere model and propose it as a model for the jamming and glass transitions that enables exploration of much higher dimensions than are usually accessible.

关键词： LATTICE theory SPHERE packings ISOSTATIC pressing STABILITY (Mechanics) MATHEMATICAL models GLASS transitions

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Densest binary sphere packings

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Physical Review E 2012年第2期85卷 021130-021130页

作者： Adam B. Hopkins Frank H. Stillinger Salvatore Torquato Department of Chemistry Department of Physics Princeton Center for Theoretical Science Princeton Institute for the Science and Technology of Materials Program in Applied and Computational Mathematics Princeton University Princeton New Jersey 08544 USA

The densest binary sphere packings in the α-x plane of small to large sphere radius ratio α and small sphere relative concentration x have historically been very difficult to determine. Previous research had led to the prediction that these packings were composed of a few known “alloy” phases including, for example, the AlB2 (hexagonal ω), HgBr2, and AuTe2 structures, and to XYn structures composed of close-packed large spheres with small spheres (in a number ratio of n to 1) in the interstices, e.g., the NaCl packing for n=1. However, utilizing an implementation of the Torquato-Jiao sphere-packing algorithm [Torquato and Jiao, Phys. Rev. E 82, 061302 (2010)], we have discovered that many more structures appear in the densest packings. For example, while all previously known densest structures were composed of spheres in small to large number ratios of one to one, two to one, and very recently three to one, we have identified densest structures with number ratios of seven to three and five to two. In a recent work [Hopkins et al., Phys. Rev. Lett. 107, 125501 (2011)], we summarized these findings. In this work, we present the structures of the densest-known packings and provide details about their characteristics. Our findings demonstrate that a broad array of different densest mechanically stable structures consisting of only two types of components can form without any consideration of attractive or anisotropic interactions. In addition, the structures that we have identified may correspond to currently unidentified stable phases of certain binary atomic and molecular systems, particularly at high temperatures and pressures.

关键词： SPHERE packings RADIUS (Geometry) PHASE transformations (Physics) ALGORITHMS TEMPERATURE effect ANISOTROPY PRESSURE

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Organizing principles for dense packings of nonspherical hard particles: Not all shapes are created equal

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Physical Review E 2012年第1期86卷 011102-011102页

作者： Salvatore Torquato Yang Jiao []Department of Chemistry Department of Physics Princeton Center for Theoretical Science Program of Applied and Computational Mathematics Princeton Institute of the Science and Technology of Materials Princeton University Princeton New Jersey 08544 USA

We have recently devised organizing principles to obtain maximally dense packings of the Platonic and Archimedean solids and certain smoothly shaped convex nonspherical particles [Torquato and Jiao, Phys. Rev. E 81, 041310 (2010)]. Here we generalize them in order to guide one to ascertain the densest packings of other convex nonspherical particles as well as concave shapes. Our generalized organizing principles are explicitly stated as four distinct propositions. All of our organizing principles are applied to and tested against the most comprehensive set of both convex and concave particle shapes examined to date, including Catalan solids, prisms, antiprisms, cylinders, dimers of spheres, and various concave polyhedra. We demonstrate that all of the densest known packings associated with this wide spectrum of nonspherical particles are consistent with our propositions. Among other applications, our general organizing principles enable us to construct analytically the densest known packings of certain convex nonspherical particles, including spherocylinders, “lens-shaped” particles, square pyramids, and rhombic pyramids. Moreover, we show how to apply these principles to infer the high-density equilibrium crystalline phases of hard convex and concave particles. We also discuss the unique packing attributes of maximally random jammed packings of nonspherical particles.

关键词： PARTICLES (Nuclear physics) PACKINGS (Chromatography) CONCAVE functions CATALANS POLYHEDRA

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Maximally dense packings of two-dimensional convex and concave noncircular particles

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Physical Review E 2012年第3期86卷 031302-031302页

作者： Steven Atkinson Yang Jiao Salvatore Torquato Department of Chemistry Department of Physics Princeton Center for Theoretical Science Program of Applied and Computational Mathematics Princeton Institute for the Science and Technology of Materials Princeton University Princeton New Jersey 08544 USA

Dense packings of hard particles have important applications in many fields, including condensed matter physics, discrete geometry, and cell biology. In this paper, we employ a stochastic search implementation of the Torquato-Jiao adaptive-shrinking-cell (ASC) optimization scheme [Nature (London) 460, 876 (2009)] to find maximally dense particle packings in d-dimensional Euclidean space Rd. While the original implementation was designed to study spheres and convex polyhedra in d≥3, our implementation focuses on d=2 and extends the algorithm to include both concave polygons and certain complex convex or concave nonpolygonal particle shapes. We verify the robustness of this packing protocol by successfully reproducing the known putative optimal packings of congruent copies of regular pentagons and octagons, then employ it to suggest dense packing arrangements of congruent copies of certain families of concave crosses, convex and concave curved triangles (incorporating shapes resembling the Mercedes-Benz logo), and “moonlike” shapes. Analytical constructions are determined subsequently to obtain the densest known packings of these particle shapes. For the examples considered, we find that the densest packings of both convex and concave particles with central symmetry are achieved by their corresponding optimal Bravais lattice packings; for particles lacking central symmetry, the densest packings obtained are nonlattice periodic packings, which are consistent with recently-proposed general organizing principles for hard particles. Moreover, we find that the densest known packings of certain curved triangles are periodic with a four-particle basis, and we find that the densest known periodic packings of certain moonlike shapes possess no inherent symmetries. Our work adds to the growing evidence that particle shape can be used as a tuning parameter to achieve a diversity of packing structures.

关键词： MAXIMAL functions DIMENSIONAL analysis CONVEX geometry CONCAVE functions PARTICLES (Nuclear physics) DISCRETE geometry POLYGONS

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Unsteady aerodynamic effects of wing-body interactions in three-dimensional insects' flapping flight 50

Unsteady aerodynamic effects of wing-body interactions in th...

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50th AIAA Aerospace sciences Meeting Including the New Horizons Forum and Aerospace Exposition

作者： Lee, Kuen-Bae Kim, Jin-Ho Park, Jin Seok Kim, Chongam Interdisciplinary Program in Computational Science and Technology Seoul National Univ. Seoul 151-742 Korea Republic of Department of Aerospace Engineering Seoul National Univ. Seoul 151-742 Korea Republic of School of Mechanical and Aerospace Engineering Institute of Advanced Aerospace Technology Seoul National University Korea Republic of

ISBN: (数字)9781600869365

This paper investigates the unsteady aerodynamic features of wing-wing, wing-body and vortex-vortex interactions in insects' flapping motions under forward flight condition. A realistic wing trajectory, called the 'figure-of-eight' motion, is extracted from a blowfly (Phormia regina)'s tethered flight experiment under the freestream velocity of 2.75m/s. Since the flow field around the blowfly exhibits characteristics of low-Reynolds number flow, the three-dimensional unsteady incompressible Navier-Stokes equations are employed as the governing equations. In order to simulate the realistic insect flapping flight including geometric and kinematical complexity with a sufficient level of grid quality, overset grid technique is used. From the authors' previous researches on two- and three-dimensional rigid wing simulation, it has been observed that the pattern of vortical flows and the interaction of vortices play an important role in generating unsteady aerodynamic forces and determining the propulsive efficiency of flapping motion. Detailed numerical simulations of a blowfly's 'wing-body' motion are conducted to examine unsteady flow features resulted from the wing-body interaction. Copyright © 2012 by the American Institute of Aeronautics and Astronautics, Inc. All rights reserved.

关键词： Navier Stokes equations

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Multilayer thin film growth on crystalline and quasicrystalline surfaces: A phase-field crystal study

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Physical Review B 2012年第24期85卷 245428-245428页

作者： Srevatsan Muralidharan Raika Khodadad Ethan Sullivan Mikko Haataja Department of Mechanical and Aerospace Engineering Princeton Institute for the Science and Technology of Materials (PRISM) Program in Applied and Computational Mathematics (PACM) Princeton University Princeton New Jersey 08544 USA and School of Mathematics Institute for Advanced Study Princeton New Jersey 08540 USA

In this paper, we explore the effects of misfit strain fields on both heterogeneous nucleation behavior and anisotropic growth of islands at submonolayer coverages and compositional patterning at complete monolayer coverage via simulations of a phase-field crystal model. In particular, deposition on top of a herringbone structure and quasicrystalline (QC) substrate are considered, the former representing a system with spatially periodic misfit strain fields arising from the presence of surface dislocations, and the latter representing a system which inherently possesses a wide range of local, aperiodic misfit patterns. In the case of single-component systems, we demonstrate that misfit strain fields lead to heterogeneous nucleation behavior and anisotropic island growth. In the case of QC substrate, a wide range of morphologies, such as coexistence of locally hexagonally ordered atomic clusters within a larger scale arrangement with overall QC symmetry and so-called “starfish” aggregates, is observed in a pure system at submonolayer coverages when the adlayer-substrate interaction strength and lattice mismatch are tuned. In the case of bulk-immiscible binary systems at complete monolayer coverage, strain-stabilized compositional domains emerge at low line tension values for both substrates. Interestingly, the compositional domains on the QC substrate inherit their symmetries at sufficiently low line tension values, while at larger line tension values, the domain structure begins to resemble the classical spinodal microstructure. Such domain structures should be readily observable in colloidal systems in which attractive interparticle and particle-substrate interactions can be tuned.

关键词： THIN films CRYSTALS NUCLEATION DISLOCATIONS in crystals MICROSTRUCTURE

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Singularities of quantum control landscapes

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Physical Review A 2012年第1期86卷 013405-013405页

作者： Re-Bing Wu Ruixing Long Jason Dominy Tak-San Ho Herschel Rabitz Department of Automation Tsinghua University Beijing 100084 China and Center for Quantum Information Science and Technology TNList Beijing 100084 China Department of Chemistry Princeton University Princeton New Jersey 08544 USA Program in Applied and Computational Mathematics Princeton University Princeton New Jersey 08544 USA

Quantum control landscape theory was formulated to assess the ease of finding optimal control fields in simulations and in the laboratory. The landscape is the observable as a function of the controls, and a primary goal of the theory is the analysis of landscape features. In what is referred to as the kinematic picture of the landscape, prior work showed that the landscapes are generally free of traps that could halt the search for an optimal control at a suboptimal observable value. The present paper considers the dynamical picture of the landscape, seeking the existence of singular controls, especially of a nonkinematic nature along with an assessment of whether they correspond to traps. We analyze the necessary and sufficient conditions for singular controls to be kinematic or nonkinematic critical solutions and the likelihood of their being encountered while maximizing an observable. An algorithm is introduced to seek singular controls on the landscape in simulations along with an associated Hessian landscape analysis. Simulations are performed for a large number of model finite-level quantum systems, showing that all the numerically identified kinematic and nonkinematic singular critical controls are not traps, in support of the prior empirical observations on the ease of finding high-quality optimal control fields.

关键词： QUANTUM theory LANDSCAPES COMPUTER simulation OPTIMAL control theory ALGORITHMS

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Topological Quantum Phase Transition in 5d Transition Metal Oxide Na2IrO3

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Physical Review Letters 2012年第10期108卷 106401-106401页

作者： Choong H. Kim Heung Sik Kim Hogyun Jeong Hosub Jin Jaejun Yu Department of Physics and Astronomy and Center for Strongly Correlated Materials Research Seoul National University Seoul 151-747 Korea Computational Science and Technology Interdisciplinary Program Seoul National University Seoul 151-747 Korea Korea Institute of Science and Technology Information Daejeon 305-806 Korea Department of Physics and Astronomy Northwestern University Evanston Illinois 60208 USA Center for Theoretical Physics Seoul National University Seoul 151-747 Korea

We predict a quantum phase transition from normal to topological insulators in the 5d transition metal oxide Na2IrO3, where the transition can be driven by the change of the long-range hopping and trigonal crystal field terms. From the first-principles-derived tight-binding Hamiltonian, we determine the phase boundary through the parity analysis. In addition, our first-principles calculations for Na2IrO3 model structures show that the interlayer distance can be an important parameter for the existence of a three-dimensional strong topological insulator phase. Na2IrO3 is suggested to be a candidate material which can have both a nontrivial topology of bands and strong electron correlations.

关键词： QUANTUM phase transitions TOPOLOGY TRANSITION metal oxides SODIUM CRYSTAL field theory HAMILTONIAN systems ELECTRON configuration

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Training in the PL-Grid as key component to attract users to Grid e-infrastructures

Lecture Notes in Computer Science (including subseries Lectu...

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Lecture Notes in Computer science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2012年 7136 LNCS卷 314-325页

作者： Borcz, Marcelina Benedyczak, Krzysztof Padée, Adam Kluszczyński, Rafal Marczak, Grzegorz Zdybek, Miroslaw Pawlik, MacIej Filocha, MacIej Bala, Piotr University of Warsaw Interdisciplinary Centre for Mathematical and Computational Modelling Pawińskiego 5a 02-106 Warsaw Poland Nicolaus Copernicus University Department of Mathematics and Computer Science Chopina 12/18 87-100 Toruń Poland AGH University of Science and Technology ACC Cyfronet AGH Nawojki 11 30-950 Kraków Poland

ISBN: (纸本)9783642282669

This chapter provides an overview of the training facilities in the PL-Grid project. It is well known that procedures necessary to obtain certificates and then install software or get access to the User Interfaces are complicated and due to security reasons cannot be simplified. For these purposes we have crated extended training facilities which allow to get easy access to the Grid. We have installed dedicated infrastructure including the computational resources, certificate authority, user portal and an on-line training system. The efficiency of the training infrastructure, materials and procedures has been proved in the numerous training sessions. © 2012 Springer-Verlag Berlin Heidelberg.

关键词： User interfaces

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Nonequilibrium static diverging length scales on approaching a prototypical model glassy state

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Physical Review E 2012年第2期86卷 021505-021505页

作者： Adam B. Hopkins Frank H. Stillinger Salvatore Torquato Department of Chemistry Princeton University Princeton New Jersey 08544 USA Princeton Institute for the Science and Technology of Materials Princeton University Princeton New Jersey 08544 USA Department of Physics Princeton University Princeton New Jersey 08544 USA Princeton Center for Theoretical Science Princeton University Princeton New Jersey 08544 USA Program in Applied and Computational Mathematics Princeton University Princeton New Jersey 08544 USA

Maximally random jammed states of hard spheres are prototypical glasses. We study the small wavenumber k behavior of the structure factor S(k) of overcompressed million-sphere packings as a function of density up to the jammed state. We find both a precursor to the glassy jammed state evident long before the jamming density is reached and two associated growing length scales, one extracted from the volume integral of the direct correlation function c(r) and the other from the small-k behavior of the structure factor S(k), that can diverge at the “critical” jammed state. We also define a nonequilibrium index X and use it to demonstrate that the packings studied are intrinsically nonequilibrium in nature well before the critical state is reached. The extension of the results reported in the present work to supercooled atomic-liquid models in which the atoms interact with both repulsive and attractive forces is also discussed.

关键词： PROTOTYPES GLASS FACTOR structure DENSITY functionals NONEQUILIBRIUM thermodynamics MATHEMATICAL models CORRELATION (Statistics) CRITICAL point

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