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CR embeddability of quotients of the Rossi sphere via spectral theory

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arXiv 2021年

作者： Bosch, Henry Gonzales, Tyler Spinelli, Kamryn Udell, Gabe Zeytuncu, Yunus E. Harvard University Department of Mathematics CambridgeMA02138 United States Yale University Applied Mathematics Program New HavenCT06511 United States Brandeis University Department of Mathematics WalthamMA02453 United States Cornell University Department of Mathematics IthacaNY14853 United States University of Michigan–Dearborn Department of Mathematics and Statistics DearbornMI48128 United States

We look at the action of finite subgroups of SU(2) on S3, viewed as a CR manifold, both with the standard CR structure as the unit sphere in C2 and with a perturbed CR structure known as the Rossi sphere. We show that quotient manifolds from these actions are indeed CR manifolds, and relate the order of the subgroup of SU(2) to the asymptotic distribution of the Kohn Laplacian’s eigenvalues on the quotient. We show that the order of the subgroup determines whether the quotient of the Rossi sphere by the action of that subgroup is CR embeddable. Finally, in the unperturbed case, we prove that we can determine the size of the subgroup by using the point spectrum. Copyright © 2021, The Authors. All rights reserved.

关键词： Laplace transforms

Relative magnetic field and slipping effect on Casson dusty fluid of two phase fluctuating flow over inclined parallel plate

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South African Journal of Chemical Engineering 2023年 44卷 135-146页

作者： khan, Dolat Kumam, Poom Kumam, Wiyada Suttiarporn, Panawan Rehman, Ali Fixed Point Research Laboratory Fixed Point Theory and Applications Research Group Center of Excellence in Theoretical and Computational Science (TaCS-CoE) Faculty of Science King Mongkut's University of Technology Thonburi (KMUTT) 126 Pracha Uthit Rd. Bang Mod Bangkok Thung Khru 10140 Thailand Center of Excellence in Theoretical and Computational Science (TaCS-CoE) Faculty of Science King Mongkut's University of Technology Thonburi (KMUTT) 126 Pracha Uthit Rd. Bang Mod Bangkok Thung Khru 10140 Thailand Applied Mathematics for Science and Engineering Research Unit (AMSERU) Program in Applied Statistics Department of Mathematics and Computer Science Faculty of Science and Technology Rajamangala University of Technology Thanyaburi (RMUTT) Pathum Thani 12110 Thailand Faculty of Science Energy and Environment King Mongkut's University of Technology North Bangkok Rayong Campus Rayong 21120 Thailand Special Interest Group for Modelling and Data Analytics Faculty of Ocean Engineering Technology and Informatics Universiti Malaysia Terengganu Terengganu Kuala Nerus 21030 Malaysia

Due to its significant applications in magnetic devices for cell separation, magnetic drugs for cancer tumor treatment, blood flow adjustment during surgery, magnetic endoscopy, and fluid pumping in industrial and engineering processes, magnetohydrodynamics (MHD) has a wide range of applications. Therefore, the aim of this study to investigate the Relative Magnetic Field and slipping effect on Casson dusty fluid of two-phase fluctuating flow over inclined parallel plate. More exactly, the relative magnetic phenomena are fixed relatively to the plate (MFFRP) or fixed relatively to the fluid (MFFRF). The mathematical modeling was established as the set of partial differential equations for dusty Casson fluid. Buckingham's pi theorem is used to find out the dimensionless variables, to make our system dimensionless. The solution in perturb form is to find out by incorporating Poincare–Lighthill perturbation technique (PLPT). To know in-depth different parameters the graphical results for both velocities are plotted with the help of software Mathcad- 15. It is clearly detected that the relative magnetic field performs a vital part in the fluid as well as particle motion. Moreover, the relative magnetic field play a vital role in the decreasing of skin friction of both plates. © 2023

关键词： Brinkman fluid Dust particles Fluctuating vertical plate Inclined relative magnetic field PLPT

Hyperuniformity of maximally random jammed packings of hyperspheres across spatial dimensions

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Physical Review E 2023年第6期108卷 064602-064602页

作者： Charles Emmett Maher Yang Jiao Salvatore Torquato Department of Chemistry Princeton University Princeton New Jersey 08544 USA Materials Science and Engineering Arizona State University Tempe Arizona 85287 USA Department of Physics Arizona State University Tempe Arizona 85287 USA Department of Physics Princeton University Princeton New Jersey 08544 USA Princeton Materials Institute Princeton University Princeton New Jersey 08544 USA Program in Applied and Computational Mathematics Princeton University Princeton New Jersey 08544 USA

The maximally random jammed (MRJ) state is the most random (i.e., disordered) configuration of strictly jammed (mechanically rigid) nonoverlapping objects. MRJ packings are hyperuniform, meaning their long-wavelength density fluctuations are anomalously suppressed compared to typical disordered systems, i.e., their structure factors S(k) tend to zero as the wave number |k| tends to zero. Here we show that generating high-quality strictly jammed states for Euclidean space dimensions d=3,4, and 5 is of paramount importance in ensuring hyperuniformity and extracting precise values of the hyperuniformity exponent α>0 for MRJ states, defined by the power-law behavior of S(k)∼|k|α in the limit |k|→0. Moreover, we show that for fixed d it is more difficult to ensure jamming as the particle number N increases, which results in packings that are nonhyperuniform. Free-volume theory arguments suggest that the ideal MRJ state does not contain rattlers, which act as defects in numerically generated packings. As d increases, we find that the fraction of rattlers decreases substantially. Our analysis of the largest truly jammed packings suggests that the ideal MRJ packings for all dimensions d≥3 are hyperuniform with α=d−2, implying the packings become more hyperuniform as d increases. The differences in α between MRJ packings and the recently proposed Manna-class random close packed (RCP) states, which were reported to have α=0.25 in d=3 and be nonhyperuniform (α=0) for d=4 and d=5, demonstrate the vivid distinctions between the large-scale structure of RCP and MRJ states in these dimensions. Our paper clarifies the importance of the link between true jamming and hyperuniformity and motivates the development of an algorithm to produce rattler-free three-dimensional MRJ packings.

关键词： Granular solids

Integrating Chain-of-Thought and Retrieval Augmented Generation Enhances Rare Disease Diagnosis from Clinical Notes

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arXiv 2025年

作者： Wu, Da Wang, Zhanliang Nguyen, Quan Wang, Kai Raymond G. Perelman Center for Cellular and Molecular Therapeutics Children's Hospital of Philadelphia PhiladelphiaPA19104 United States Applied Mathematics and Computational Science Graduate Program University of Pennsylvania PhiladelphiaPA19104 United States Bioengineering Graduate Program University of Pennsylvania PhiladelphiaPA19104 United States Department of Pathology and Laboratory Medicine Perelman School of Medicine University of Pennsylvania PhiladelphiaPA19104 United States

Background: Several studies show that large language models (LLMs) struggle with phenotype-driven gene prioritization for rare diseases. These studies typically use Human Phenotype Ontology (HPO) terms to prompt foundation models like GPT and LLaMA to predict candidate genes. However, in real-world settings, foundation models are not optimized for domain-specific tasks like clinical diagnosis, yet inputs are unstructured clinical notes rather than standardized terms. How LLMs can be instructed to predict candidate genes or disease diagnosis from unstructured clinical notes remains a major challenge. Methods: We introduce RAG-driven CoT and CoT-driven RAG, two methods that combine Chain-of-Thought (CoT) and Retrieval Augmented Generation (RAG) to analyze clinical notes. A five-question CoT protocol mimics expert reasoning, while RAG retrieves data from sources like HPO and OMIM (Online Mendelian Inheritance in Man). We evaluated these approaches on rare disease datasets, including 5,980 Phenopacket-derived notes, 255 literature-based narratives, and 220 in-house clinical notes from Children’s Hospital of Philadelphia. Results: We found that recent foundations models, including Llama 3.3-70B-Instruct and DeepSeek-R1-Distill-Llama-70B, outperformed earlier versions such as Llama 2 and GPT-3.5. We also showed that RAG-driven CoT and CoT-driven RAG both outperform foundation models in candidate gene prioritization from clinical notes;in particular, both methods with DeepSeek backbone resulted in a top-10 gene accuracy of over 40% on Phenopacket-derived clinical notes. RAG-driven CoT works better for high-quality notes, where early retrieval can anchor the subsequent reasoning steps in domain-specific evidence, while CoT-driven RAG has advantage when processing lengthy and noisy notes. Conclusions: Integrating CoT and RAG enhances LLMs’ understanding of clinical notes in the context of rare disease diagnosis, and can facilitate various downstream medical tasks. © 2025, CC

关键词： Chains

Characterization of void space, large-scale structure, and transport properties of maximally random jammed packings of superballs

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Physical Review Materials 2022年第2期6卷 025603-025603页

作者： Charles Emmett Maher Frank H. Stillinger Salvatore Torquato Department of Chemistry Princeton University Princeton New Jersey 08544 USA Department of Physics Princeton University Princeton New Jersey 08544 USA Princeton Institute for the Science and Technology of Materials Princeton University Princeton New Jersey 08544 USA Program in Applied and Computational Mathematics Princeton University Princeton New Jersey 08544 USA

Dense, disordered packings of particles are useful models of low-temperature amorphous phases of matter, biological systems, granular media, and colloidal systems. The study of dense packings of nonspherical particles enables one to ascertain how rotational degrees of freedom affect packing behavior. Here, we study superballs, a large family of deformations of the sphere, defined in three dimensions by |x1|2p+|x2|2p+|x3|2p≤1, where p∈(0,∞) is a deformation parameter indicating to what extent the shape deviates from a sphere. As p increases from the sphere point (p=1), the superball tends to a cuboidal shape and approaches a cube in the p→∞ limit. As p→0.5, it approaches an octahedron, becomes a concave body with octahedral symmetry for p<0.5, and approaches a three-dimensional cross in the limit p→0. Previous characterization of superball packings has shown that they have a maximally random jammed (MRJ) state, whose properties (e.g., packing fraction ϕ, average contact number Z¯) vary nonanalytically as p diverges from unity. Here, we use an event-driven molecular dynamics algorithm to produce MRJ superball packings with 0.85≤p≤1.50. To supplement the previous work on such packings, we characterize their large-scale structure by examining the behaviors of their structure factors S(Q) and spectral densities χ̃V(Q), as the wave number Q tends to zero, and find that these packings are effectively hyperuniform for all values of p examined. We show that the mean width w¯ is a useful length scale to make distances dimensionless in order to compare systematically superballs of different shape. Moreover, we compute the complementary cumulative pore-size distribution F(δ) and find that the pore sizes tend to decrease as |1−p| increases. From F(δ), we estimate how the fluid permeability, mean survival time, and principal diffusion relaxation time vary as a function of p. Additionally, we compute the diffusion “spreadability” S(t) [Torquato, Phys. Rev. E 104, 054102 (2021)] of

关键词： Granular packing

Identification of finite circular metric spaces by magnitude and Riesz energy

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arXiv 2024年

作者： Kodama, Hiroki O’Hara, Jun Center for Mathematical Engineering Musashino University 3-3-3 Ariake Koto-ku Tokyo135-8181 Japan Interdisciplinary Theoretical and Mathematical Sciences Program RIKEN 2-1 Hirosawa Saitama Wako-shi351-0198 Japan Department of Mathematics and Informatics Faculty of Science Chiba University 1-33 Yayoi-cho Inage Chiba263-8522 Japan

We study the problem whether regular polygons and cycle graphs can be identified by the magnitude or the discrete Riesz energy. We give an affirmative answer for a finite number of cases when the number of vertices is small and a negative answer for an infinite number of wide cases by giving a way to construct non-isometric spaces, which we call isomers, with the same magnitude or the discrete Riesz energy. We study whether isomers can be distinguished by the magnitude homology *** Codes 51F99 Copyright © 2024, The Authors. All rights reserved.

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Potential of fungal thermostable alpha amylase enzyme isolated from Hot springs of Central Anatolia(Turkey)in wheat bread quality

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Food Bioscience 2022年第1期45卷 214-222页

作者： Arzu Unal Asiye Seis Subasi Semra Malkoc Ijlal Ocak SElif Korcan Elif Yetilmezer Seyhun Yurdugül Hülya Yaman Turgay Sanal Alaettin Keceli Igdır University Faculty of AgricultureDepartment of Agricultural BiotechnologyI˘gdırTurkey Ministry of Agriculture and Forestry Field Crops Central Research Institute Department of Quality and TechnologyAnkaraTurkey Eskisehir Technical University Faculty of EngineeringDepartment of Environmental EngineeringEskisehirTurkey Afyon Kocatepe University Faculty of EducationDepartment of Mathematics and Science EducationDivision of Science EducationAfyonTurkey Usak University Vocational School of Health ServicesMedical Laboratory Techniques ProgramUsakTurkey Ministry of Agriculture and Forestry Field Crops Central Research Institute Department of BiotechnologyAnkaraTurkey Bolu Abant Izzet Baysal University Faculty of Arts and ScienceDepartment of BiologyBoluTurkey Bolu Abant Izzet Baysal University Vocational School of the Technical Sciences of BoluFood Technology ProgramBoluTurkey Pamukkale University School of Applied SciencesDepartment of Organic Farming Business ManagementDenizliTurkey

Many industrial processes may quickly proceed with biotechnological and enzymatic *** and production facilitator properties of enzymes have provided variable advantages for ***,enzyme utilization has become inevitable for industry and supplied financial advantages in case of the high energy requirement *** the study,the amylase enzymes were isolated from thermal spring sources,and the effect on bread quality was ***,fungal amylases were isolated from thermal spring sources(29-98◦C)in various places around *** determining the functional properties of amylase enzymes,the most active enzyme was used in bread production to examine their effect on bread *** maximum alpha-amylase activity(38.6 U/mg)has been detected in Aspergillus niger G 2-1 *** compared with the commercially available one,native alpha-amylase increased the bread volume.A significant difference(p<0.01)was found in the color properties and size of the bread between microbial produced in this study and commercially produced *** ppm alpha-amylase addition showed the optimum bread properties for dough processing.

关键词： Alpha-amylase Thermal spring Quality of bread Commercial enzymes

Local order metrics for many-particle systems across length scales

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arXiv 2024年

作者： Maher, Charles Emmett Torquato, Salvatore Department of Chemistry Princeton University New Jersey08544 United States Department of Chemistry Princeton University PrincetonNJ08544 United States Department of Physics Princeton University PrincetonNJ08544 United States Princeton Institute for the Science and Technology of Materials Princeton University PrincetonNJ08544 United States Program in Applied and Computational Mathematics Princeton University PrincetonNJ08544 United States

Formulating order metrics that sensitively quantify the degree of order/disorder in many-particle systems in d-dimensional Euclidean space Rd across length scales is an outstanding challenge in physics, chemistry, and materials science. Since an infinite set of n-particle correlation functions is required to fully characterize a system, one must settle for a reduced set of structural information, in practice. We initiate a program to use the local number variance σN2 (R) associated with a spherical sampling window of radius R (which encodes pair correlations) and an integral measure derived from it ΣN(Ri, Rj) that depends on two specified radial distances Ri and Rj. Across the first three space dimensions (d = 1, 2, 3), we find these metrics can sensitively describe and categorize the degree of order/disorder of 41 different models of antihyperuniform, nonhyperuniform, disordered hyperuniform, and ordered hyperuniform many-particle systems at a specified length scale R. Using our local variance metrics, we demonstrate the importance of assessing order/disorder with respect to a specific value of R. These local order metrics could also aid in the inverse design of structures with prescribed length-scale-specific degrees of order/disorder that yield desired physical properties. In future work, it would be fruitful to explore the use of higher-order moments of the number of points within a spherical window of radius R [S. Torquato et al., Phys. Rev. X, 11, 021028 (2021)] to devise even more sensitive order metrics. © 2024, CC BY.

关键词： Inverse problems

Discrete unified gas kinetic scheme for the solution of electron Boltzmann transport equation with Callaway approximation

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arXiv 2023年

作者： Lian, Meng Zhang, Chuang Guo, Zhaoli Lü, Jing-Tao School of Physics Institute for Quantum Science and Engineering Wuhan National High Magnetic Field Center Huazhong University of Science and Technology Wuhan430074 China Department of Physics Hangzhou Dianzi University Hangzhou310018 China Institute of Interdisciplinary Research for Mathematics and Applied Science Huazhong University of Science and Technology Wuhan430074 China

Electrons are the carriers of heat and electricity in materials, and exhibit abundant transport phenomena such as ballistic, diffusive, and hydrodynamic behaviors in systems with different sizes. The electron Boltzmann transport equation (eBTE) is a reliable model for describing electron transport, but it is a challenging problem to efficiently obtain the numerical solutions of eBTE within one unified scheme involving ballistic, hydrodynamics and/or diffusive regimes. In this work, a discrete unified gas kinetic scheme (DUGKS) in finite-volume framework is developed based on the eBTE with the Callaway relaxation model for electron transport. By reconstructing the distribution function at the cell interface, the processes of electron drift and scattering are coupled together within a single time step. Numerical tests demonstrate that the DUGKS can be adaptively applied to multiscale electron transport, across different regimes. Copyright © 2023, The Authors. All rights reserved.

关键词： Distribution functions