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检索条件"机构=Department of Mechanical Engineering and Program in Integrated Applied Mathematics"
268 条 记 录,以下是101-110 订阅
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Using physical features of protein core packing to distinguish real proteins from decoys
arXiv
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arXiv 2020年
作者: Grigas, Alex T. Mei, Zhe Treado, John D. Levine, Zachary A. Regan, Lynne O'Hern, Corey S. Graduate Program in Computational Biology and Bioinformatics Yale University New HavenCT06520 United States Integrated Graduate Program in Physical and Engineering Biology Yale University New HavenCT06520 United States Department of Chemistry Yale University New HavenCT06520 United States Department of Mechanical Engineering and Materials Science Yale University New HavenCT06520 United States Department of Pathology Yale University New HavenCT06520 United States Department of Molecular Biophysics and Biochemistry Yale University New HavenCT06520 United States Institute of Quantitative Biology Biochemistry and Biotechnology Centre for Synthetic and Systems Biology School of Biological Sciences University of Edinburgh Department of Physics Yale University New HavenCT06520 United States Department of Applied Physics Yale University New HavenCT06520 United States
The ability to consistently distinguish real protein structures from computationally generated model decoys is not yet a solved problem. One route to distinguish real protein structures from decoys is to delineate the... 详细信息
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Heterogeneous inputs to central pattern generators can shape insect gaits.
arXiv
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arXiv 2018年
作者: Aminzare, Zahra Holmes, Philip Program in Applied and Computational Mathematics Princeton University NJ United States Program in Applied and Computational Mathematics Department of Mechanical and Aerospace Engineering Princeton Neuroscience Institute Princeton University NJ United States
In our previous work [1], we studied an interconnected bursting neuron model for insect locomotion, and its corresponding phase oscillator model, which at high speed can generate stable tripod gaits with three legs of... 详细信息
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Current md forcefields fail to capture key features of protein structure and fluctuations: a case study of cyclophilin a and t4 lysozyme
arXiv
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arXiv 2020年
作者: Mei, Zhe Grigas, Alex T. Treado, John D. Corres, Gabriel Melendez Vuorte, Maisa Sammalkorpi, Maria Regan, Lynne Levine, Zachary A. O’Hern, Corey S. Department of Chemistry Yale University New HavenCT06520 United States Integrated Graduate Program in Physical and Engineering Biology Yale University New HavenCT06520 United States Graduate Program in Computational Biology and Bioinformatics Yale University New HavenCT06520 United States Department of Mechanical Engineering and Materials Science Yale University New HavenCT06520 United States Department of Biology UPR Humacao Puerto RicoHumacao00792 Puerto Rico Department of Chemistry and Materials Science School of Chemical Engineering Aalto University Aalto Finland Department of Bioproducts and Biosystems School of Chemical Engineering Aalto University Aalto Finland Institute of Quantitative Biology Biochemistry and Biotechnology Center for Synthetic and Systems Biology School of Biological Sciences University of Edinburgh Edinburgh United Kingdom Department of Pathology Yale School of Medicine New HavenCT06520 United States Department of Molecular Biophysics and Biochemistry Yale University New HavenCT06520 United States Department of Physics Yale University New HavenCT06520 United States Department of Applied Physics Yale University New HavenCT06520 United States
Globular proteins undergo thermal fluctuations in solution, while maintaining an overall well-defined folded structure. In particular, studies have shown that the core structure of globular proteins differs in small, ... 详细信息
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End-to-end symmetry preserving inter-atomic potential energy model for finite and extended systems  32
End-to-end symmetry preserving inter-atomic potential energy...
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32nd Conference on Neural Information Processing Systems, NeurIPS 2018
作者: Zhang, Linfeng Han, Jiequn Wang, Han Saidi, Wissam A. Car, Roberto Weinan, E. Program in Applied and Computational Mathematics Princeton University United States Institute of Applied Physics and Computational Mathematics China CAEP Software Center for High Performance Numerical Simulation China Department of Mechanical Engineering and Materials Science University of Pittsburgh United States Department of Chemistry Department of Physics Princeton University United States Princeton Institute for the Science and Technology of Materials Princeton University United States Department of Mathematics Princeton University United States Beijing Institute of Big Data Research China
Machine learning models are changing the paradigm of molecular modeling, which is a fundamental tool for material science, chemistry, and computational biology. Of particular interest is the inter-atomic potential ene... 详细信息
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Densification of single-walled carbon nanotube films: Mesoscopic distinct element method simulations and experimental validation
arXiv
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arXiv 2020年
作者: Drozdov, Grigorii Ostanin, Igor Xu, Hao Wang, Yuezhou Dumitrică, Traian Grebenko, Artem Tsapenko, Alexey P. Gladush, Yuriy Ermolaev, Georgy Volkov, Valentyn S. Eibl, Sebastian Rüde, Ulrich Nasibulin, Albert G. Scientific Computation Program University of Minnesota Twin CitiesMN55455 United States Multi-Scale Mechanics Faculty of Engineering Technology MESA+ University of Twente Enschede7500 AE Netherlands Skolkovo Institute of Science and Technology Nobel St. 3 Moscow Russia Department of Aerospace Engineering and Mechanics University of Minnesota Twin CitiesMN55455 United States Integrated Engineering Minnesota State University MankatoMN56001 United States Department of Mechanical Engineering University of Minnesota Twin CitiesMN55455 United States Moscow Institute of Physics and Technology Institute Lane 9 Dolgoprudniy Russia Department of Applied Physics Aalto University School of Science AaltoFI-00076 Finland Center for Photonics and 2D Materials Moscow Institute of Physics and Technology Dolgoprudny141700 Russia Friedrich-Alexander University Erlangen-Nuremberg Cauerstr.11 Erlangen91052 Germany Aalto University Department of Materials Science and Engineering Aalto00076 Finland
Nanometer thin single-walled carbon nanotube (CNT) films collected from the aerosol chemical deposition reactors have gathered attention for their promising applications. Densification of these pristine films provides... 详细信息
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End-to-end symmetry preserving inter-atomic potential energy model for finite and extended systems  18
End-to-end symmetry preserving inter-atomic potential energy...
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Proceedings of the 32nd International Conference on Neural Information Processing Systems
作者: Linfeng Zhang Jiequn Han Han Wang Wissam A. Saidi Roberto Car E. Weinan Program in Applied and Computational Mathematics Princeton University Institute of Applied Physics and Computational Mathematics China and CAEP Software Center for High Performance Numerical Simulation China Department of Mechanical Engineering and Materials Science University of Pittsburgh Program in Applied and Computational Mathematics Princeton University and Department of Chemistry and Department of Physics Princeton University and Princeton Institute for the Science and Technology of Materials Princeton University Program in Applied and Computational Mathematics Princeton University and Department of Mathematics Princeton University and Beijing Institute of Big Data Research China
Machine learning models are changing the paradigm of molecular modeling, which is a fundamental tool for material science, chemistry, and computational biology. Of particular interest is the inter-atomic potential ene...
来源: 评论
Universal research index: An inclusive metric to quantify scientific research output
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Journal of Academic Librarianship 2023年 第3期49卷
作者: Keshavarz-Fathi, Mahsa Yazdanpanah, Niloufar Kolahchi, Sajad Ziaei, Heliya Darmstadt, Gary L. Dorigo, Tommaso Dochy, Filip Levin, Lisa Thongboonkerd, Visith Ogino, Shuji Chen, Wei-Hsin Perc, Matjaz Tremblay, Mark S. Olusanya, Bolajoko O. Rao, Idupulapati M. Hatziargyriou, Nikos Moradi-Lakeh, Maziar Bella, Federico Rosivall, Laszlo Gandomi, Amir H. Sorooshian, Armin Gupta, Manoj Gal, Ciprian Lozano, Andres M. Weaver, Connie Tanzer, Michael Poggi, Alessandro Sepanlou, Sadaf G. Weiskirchen, Ralf Jambrak, Anet Režek Torres, Pedro J. Capanoglu, Esra Barba, Francisco J. Ernest, Chua Kian Jon Sigman, Mariano Pluchino, Stefano Gharehpetian, Gevork B. Fereshtehnejad, Seyed-Mohammad Yang, Muh-Hwa Thomas, Sabu Cai, Wenju Comini, Elisabetta Scolding, Neil J. Myles, Paul S. Nieto, Juan J. Perry, George Sedikides, Constantine Rezaei, Nima School of Medicine Tehran University of Medical Sciences Tehran Iran Universal Scientific Education and Research Network (USERN) Iran Department of Pediatrics Stanford University School of Medicine Stanford CA United States Istituto Nazionale di Fisica Nucleare (INFN) Via Francesco Marzolo Sezione di Padova Italy High Impact Learning Academy Learning and Development Department Brussels Belgium Center for Marine Biodiversity and Conservation Integrative Oceanography Division Scripps Institution of Oceanography University of California San Diego San Diego CA United States Medical Proteomics Unit Office for Research and Development Faculty of Medicine Siriraj Hospital Mahidol University Bangkok Thailand Department of Epidemiology Harvard T.H. Chan School of Public Health Boston MA United States Program in MPE Molecular Pathological Epidemiology Department of Pathology Brigham and Women's Hospital and Harvard Medical School Boston MA United States Broad Institute of MIT and Harvard Cambridge MA United States Department of Aeronautics and Astronautics National Cheng Kung University Tainan Taiwan Research Center for Smart Sustainable Circular Economy Tunghai University Taichung 407 Taiwan Department of Mechanical Engineering National Chin-Yi University of Technology Taichung 411 Taiwan Faculty of Natural Sciences and Mathematics University of Maribor Maribor Slovenia Department of Medical Research China Medical University Hospital China Medical University Taichung Taiwan Complexity Science Hub Vienna Vienna Austria Alma Mater Europaea Maribor Slovenia Children's Hospital of Eastern Ontario Research Institute Department of Pediatrics University of Ottawa Ottawa ON Canada Centre for Healthy Start Initiative Ikoyi Lagos Nigeria Alliance of Bioversity International International Center for Tropical Agriculture Cali Colombia International Centre of Insect Physiology and Ecology (ICIPE) Nairobi Kenya School of Electrical and Computer Engineering Natio
Scientometrics and bibliometrics, the subfields of library and information science, deal with the quantity and quality of research outputs. Currently, various scientometric indices are being used to quantify and compa... 详细信息
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Mixed mode oscillations and phase locking in coupled FitzHugh-Nagumo model neurons
arXiv
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arXiv 2018年
作者: Davison, Elizabeth N. Aminzare, Zahra Leonard, Naomi Ehrich Dey, Biswadip Department of Mechanical and Aerospace Engineering Princeton University PrincetonNJ08540 United States Program in Applied and Computational Mathematics Princeton University PrincetonNJ08544 United States
We study the dynamics of a low-dimensional system of coupled model neurons as a step towards understanding the vastly complex network of neurons in the brain. We analyze the bifurcation structure of a system of two mo... 详细信息
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Systematic study of flow vector fluctuations in sNN=5.02 TeV Pb-Pb collisions
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Physical Review C 2024年 第6期109卷 065202-065202页
作者: S. Acharya D. Adamová A. Agarwal G. Aglieri Rinella L. Aglietta M. Agnello N. Agrawal Z. Ahammed S. Ahmad S. U. Ahn I. Ahuja A. Akindinov V. Akishina M. Al-Turany D. Aleksandrov B. Alessandro H. M. Alfanda R. Alfaro Molina B. Ali A. Alici N. Alizadehvandchali A. Alkin J. Alme G. Alocco T. Alt A. R. Altamura I. Altsybeev J. R. Alvarado M. N. Anaam C. Andrei N. Andreou A. Andronic E. Andronov V. Anguelov F. Antinori P. Antonioli N. Apadula L. Aphecetche H. Appelshäuser C. Arata S. Arcelli M. Aresti R. Arnaldi J. G. M. C. A. Arneiro I. C. Arsene M. Arslandok A. Augustinus R. Averbeck M. D. Azmi H. Baba A. Badalà J. Bae Y. W. Baek X. Bai R. Bailhache Y. Bailung R. Bala A. Balbino A. Baldisseri B. Balis D. Banerjee Z. Banoo V. Barbasova F. Barile L. Barioglio M. Barlou B. Barman G. G. Barnaföldi L. S. Barnby E. Barreau V. Barret L. Barreto C. Bartels K. Barth E. Bartsch N. Bastid S. Basu G. Batigne D. Battistini B. Batyunya D. Bauri J. L. Bazo Alba I. G. Bearden C. Beattie P. Becht D. Behera I. Belikov A. D. C. Bell Hechavarria F. Bellini R. Bellwied S. Belokurova L. G. E. Beltran Y. A. V. Beltran G. Bencedi A. Bensaoula S. Beole Y. Berdnikov A. Berdnikova L. Bergmann M. G. Besoiu L. Betev P. P. Bhaduri A. Bhasin M. A. Bhat B. Bhattacharjee L. Bianchi N. Bianchi J. Bielčík J. Bielčíková A. P. Bigot A. Bilandzic G. Biro S. Biswas N. Bize J. T. Blair D. Blau M. B. Blidaru N. Bluhme C. Blume G. Boca F. Bock T. Bodova J. Bok L. Boldizsár M. Bombara P. M. Bond G. Bonomi H. Borel A. Borissov A. G. Borquez Carcamo H. Bossi E. Botta Y. E. M. Bouziani L. Bratrud P. Braun-Munzinger M. Bregant M. Broz G. E. Bruno M. D. Buckland D. Budnikov H. Buesching S. Bufalino P. Buhler N. Burmasov Z. Buthelezi A. Bylinkin S. A. Bysiak J. C. Cabanillas Noris M. F. T. Cabrera M. Cai H. Caines A. Caliva E. Calvo Villar J. M. M. Camacho P. Camerini F. D. M. Canedo S. L. Cantway M. Carabas A. A. Carballo F. Carnesecchi R. Caron L. A. D. Carvalho J. Castillo Castellanos M. Castoldi F. Catalano S. Cattaruzzi C. Ceballos Sanchez R. Cerri I. Chakabe CNRS/IN2P3 LPC Clermont-Ferrand France Nuclear Physics Institute of the Czech Academy of Sciences Husinec-Řež Czech Republic Homi Bhabha National Institute Kolkata India Geneva Switzerland and Sezione INFN Turin Italy and Sezione INFN Bologna Italy Department of Physics Daejeon Republic of Korea Faculty of Science Affiliated with an institute covered by a cooperation agreement with CERN Frankfurt Institute for Advanced Studies Research Division and ExtreMe Matter Institute EMMI Turin Italy Wuhan China Instituto de Física Houston Texas USA Sungkyunkwan University Suwon City Republic of Korea Department of Physics and Technology Cagliari Italy Institut für Kernphysik Bari Italy Physik Department Technische Universität München Munich Germany High Energy Physics Group Bucharest Romania University of Derby Derby United Kingdom Institut für Kernphysik Münster Germany Physikalisches Institut Padova Italy Bologna Italy Berkeley California USA SUBATECH Université Grenoble-Alpes CNRS-IN2P3 Grenoble France and Sezione INFN Cagliari Italy São Paulo Brazil New Haven Connecticut USA Tokyo Japan Catania Italy Gangneung Republic of Korea Hefei China Indore India Physics Department Université Paris-Saclay Centre d'Etudes de Saclay (CEA) IRFU Départment de Physique Nucléaire (DPhN) Saclay France Cracow Poland Department of Physics and Centre for Astroparticle Physics and Space Science (CAPSS) Kolkata India and Sezione INFN Bari Italy School of Science Department of Physics Athens Greece Department of Physics Guwahati India Budapest Hungary Liverpool United Kingdom Department of Physics Division of Particle Physics Lund Sweden Affiliated with an international laboratory covered by a cooperation agreement with CERN Mumbai India Sección Física Departamento de Ciencias Niels Bohr Institute CNRS IPHC UMR 7178 F-67000 Strasbourg France Strasbourg France Universidad Autónoma de Sinaloa Culiacá
Measurements of the pT-dependent flow vector fluctuations in Pb–Pb collisions at sNN=5.02TeV using azimuthal correlations with the ALICE experiment at the Large Hadron Collider are presented. A four-particle correlat... 详细信息
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Measurements of jet quenching using semi-inclusive hadron+jet distributions in pp and central Pb-Pb collisions at sNN=5.02 TeV
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Physical Review C 2024年 第1期110卷 014906-014906页
作者: S. Acharya D. Adamová G. Aglieri Rinella M. Agnello N. Agrawal Z. Ahammed S. Ahmad S. U. Ahn I. Ahuja A. Akindinov M. Al-Turany D. Aleksandrov B. Alessandro H. M. Alfanda R. Alfaro Molina B. Ali A. Alici N. Alizadehvandchali A. Alkin J. Alme G. Alocco T. Alt A. R. Altamura I. Altsybeev J. R. Alvarado M. N. Anaam C. Andrei N. Andreou A. Andronic V. Anguelov F. Antinori P. Antonioli N. Apadula L. Aphecetche H. Appelshäuser C. Arata S. Arcelli M. Aresti R. Arnaldi J. G. M. C. A. Arneiro I. C. Arsene M. Arslandok A. Augustinus R. Averbeck M. D. Azmi H. Baba A. Badalà J. Bae Y. W. Baek X. Bai R. Bailhache Y. Bailung A. Balbino A. Baldisseri B. Balis D. Banerjee Z. Banoo R. Barbera F. Barile L. Barioglio M. Barlou B. Barman G. G. Barnaföldi L. S. Barnby V. Barret L. Barreto C. Bartels K. Barth E. Bartsch N. Bastid S. Basu G. Batigne D. Battistini B. Batyunya D. Bauri J. L. Bazo Alba I. G. Bearden C. Beattie P. Becht D. Behera I. Belikov A. D. C. Bell Hechavarria F. Bellini R. Bellwied S. Belokurova Y. A. V. Beltran G. Bencedi S. Beole Y. Berdnikov A. Berdnikova L. Bergmann M. G. Besoiu L. Betev P. P. Bhaduri A. Bhasin M. A. Bhat B. Bhattacharjee L. Bianchi N. Bianchi J. Bielčík J. Bielčíková J. Biernat A. P. Bigot A. Bilandzic G. Biro S. Biswas N. Bize J. T. Blair D. Blau M. B. Blidaru N. Bluhme C. Blume G. Boca F. Bock T. Bodova A. Bogdanov S. Boi J. Bok L. Boldizsár M. Bombara P. M. Bond G. Bonomi H. Borel A. Borissov A. G. Borquez Carcamo H. Bossi E. Botta Y. E. M. Bouziani L. Bratrud P. Braun-Munzinger M. Bregant M. Broz G. E. Bruno M. D. Buckland D. Budnikov H. Buesching S. Bufalino P. Buhler N. Burmasov Z. Buthelezi A. Bylinkin S. A. Bysiak M. Cai H. Caines A. Caliva E. Calvo Villar J. M. M. Camacho P. Camerini F. D. M. Canedo S. L. Cantway M. Carabas A. A. Carballo F. Carnesecchi R. Caron L. A. D. Carvalho J. Castillo Castellanos F. Catalano C. Ceballos Sanchez I. Chakaberia P. Chakraborty S. Chandra S. Chapeland M. Chartier S. Chattopadhyay T. Cheng C. Cheshkov B. Cheynis V. Chibante Barroso D. D. Chinellato E. CNRS/IN2P3 LPC Clermont-Ferrand France Nuclear Physics Institute of the Czech Academy of Sciences Husinec-Řež Czech Republic Geneva Switzerland Turin Italy Bologna Italy Homi Bhabha National Institute Kolkata India Department of Physics Daejeon Republic of Korea Faculty of Science Affiliated with an institute covered by a cooperation agreement with CERN Research Division and ExtreMe Matter Institute EMMI Wuhan China Instituto de Física and Sezione INFN Bologna Italy Houston Texas USA Department of Physics and Technology Cagliari Italy Institut für Kernphysik Bari Italy Physik Department Technische Universität München Munich Germany High Energy Physics Group Bucharest Romania University of Derby Derby United Kingdom Institut für Kernphysik Münster Germany Physikalisches Institut Padova Italy Berkeley California USA SUBATECH IMT Atlantique Université Grenoble-Alpes CNRS-IN2P3 Grenoble France and Sezione INFN Cagliari Italy São Paulo Brazil New Haven Connecticut USA Tokyo Japan Catania Italy Sungkyunkwan University Suwon City Republic of Korea Gangneung Republic of Korea Hefei China Indore India Université Paris-Saclay Centre d'Etudes de Saclay (CEA) IRFU Départment de Physique Nucléaire (DPhN) Saclay France Cracow Poland Department of Physics and Centre for Astroparticle Physics and Space Science (CAPSS) Kolkata India Physics Department and Sezione INFN Catania Italy and Sezione INFN Bari Italy School of Science Department of Physics Athens Greece Department of Physics Guwahati India Budapest Hungary Nuclear Physics Group STFC Liverpool United Kingdom Department of Physics Division of Particle Physics Lund Sweden Affiliated with an international laboratory covered by a cooperation agreement with CERN Mumbai India Sección Física Departamento de Ciencias Niels Bohr Institute CNRS IPHC UMR 7178 F-67000 Strasbourg France Strasbourg France and Sezione INFN Turin Italy INFN
The ALICE Collaboration reports measurements of the semi-inclusive distribution of charged-particle jets recoiling from a high transverse momentum (high pT) charged hadron, in pp and central Pb-Pb collisions at center... 详细信息
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