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Research on building scientific data ontology

Research on building scientific data ontology

引用

4th International Conference on Developments in eSystems Engineering, DeSE 2011

作者： Goranova, Mariana Shishedjiev, Bogdan Georgieva, Juliana Department of Programming and Computer Technologies Technical University of Sofia Sofia Bulgaria

ISBN: (纸本)9781457721861

When dealing with complex systems design and application the notion of ontologies helps the process of application integration. To solve the problems with discover, interpret and reuse data we have to recognize ontology as a concept that formalizes the management and integration of information, services and processes. In this paper we present our work towards the development and evaluation of scientific data ontology that helps the system integration architect achieve interoperability between different systems. © 2011 IEEE.

关键词： Ontology

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Data security and validation framework for a scientific data processing SOA based system

Data security and validation framework for a scientific data...

引用

4th International Conference on Developments in eSystems Engineering, DeSE 2011

作者： Gancheva, Veska Programming and Computer Technologies Department Technical University of Sofia Sofia Bulgaria

ISBN: (纸本)9781457721861

A data security and validation framework of a SOA based system for management, storage, processing and visualization of data obtained from scientific experiments is proposed in this paper. The framework covers the three levels of data security: authorized user access;data encryption and data validation. To ensure authorized user access three access levels are provided: ownership, distribution rights and read rights. To ensure the data encryption an asymmetric 128-bit encrypting method based on public and private key is implemented. A universal approach for complete data validation has been suggested and implemented as web service. Data validation service allows validating the input data processed by each of the modules in the system. A declarative language defining the data validation and their interpretation based on XML standard is specified, by which precise rules in XML format are established and simultaneously with a library that supports this grammar is performed. In the language structures are included elements describing the data, rules and logic, which have to satisfy the input data. The actual definition is supported by a definition repository XML file and allows adding additional field types or complex validation logic as needed and easy modification of the validation rules. © 2011 IEEE.

关键词： Web services

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Automatic conversion of scientific data into canonical format

Automatic conversion of scientific data into canonical forma...

引用

IEEE EUROCON-International Conference on computer As A Tool

作者： Goranova, Mariana Shishedjiev, Bogdan Georgieva, Juliana Achev, Velin Department of Programming and Computer Technologies Technical University of Sofia Sofia Bulgaria

ISBN: (纸本)9781424474868

The purpose of the automatic conversion of scientific data into canonical format is to provide a link between raw representation of data and database schemas. On the basis of these concepts Web services are developed for automatic XML description. They describe structurally and semantically scientific data and the conversion of the raw data layout description into canonical form based on data semantics. The canonical form looks like a relational data model where efficient methods for storage and retrieval of scientific data have been used. This paper describes the implementation of the converter compiler of raw scientific data layout description into canonical format. Using canonical XML form we have achieved better standardization of the input for data manipulation and visualization routines and minimization of their number. © 2011 IEEE.

关键词： XML

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Exploring the efficiency of parallel bacteria foraging metaheuristics for job shop scheduling problem optimization 11

Exploring the efficiency of parallel bacteria foraging metah...

引用

Proceedings of the 12th International Conference on computer Systems and technologies

作者： Borovska, Plamenka Asenov, Emilyan Gancheva, Veska Department of Computer Systems Technical University of Sofia Bulgaria Department of Programming and Computer Technologies Technical University of Sofia Bulgaria

ISBN: (纸本)9781450309172

This paper suggest a model of parallel computation based on Bacteria Foraging metaheuristics for Job Shop Scheduling optimization problem. The parallel model is verified experimentally by Hybrid (MPI + OpenMP) programming implementations, run on heterogeneous computer cluster. The experimental study comprises parallel performance evaluation, parallel algorithm scalability analysis, profiling and evaluation of solution quality. © 2011 ACM.

关键词： Parallel programming

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Parallel performance evaluation of multithreaded local sequence alignment 11

Parallel performance evaluation of multithreaded local seque...

引用

Proceedings of the 12th International Conference on computer Systems and technologies

作者： Borovska, Plamenka Gancheva, Veska Dimitrov, Galin Chintov, Krasimir Department of Computer Systems Technical University of Sofia Bulgaria Department of Programming and Computer Technologies Technical University of Sofia Bulgaria

ISBN: (纸本)9781450309172

Bioniformatics is area, demanding knowledge and skills for acquisition, storing, management, analysis, interpretation and dissemination of biological information. This scientific area requires powerful computing resources for exploring large sets of biological data. Biological sequence processing is a key for molecular biology. Smith-Waterman algorithm, based on dynamic programming has become the most fundamental in bioinformatics. The goal of this paper is to investigate the efficiency of parallel multithreaded implementation based on Smith-Waterman algorithm. Performance parameters have been estimated by the experiments using various data sets on two parallel computer platforms. © 2011 ACM.

关键词： Dynamic programming

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Grid resource management using lottery scheduling 11

Grid resource management using lottery scheduling

引用

Proceedings of the 12th International Conference on computer Systems and technologies

作者： Borovska, Plamenka Aleksieva-Petrova, Adelina Gancheva, Veska Beshkov, Stefan Department of Computer Systems Technical University of Sofia Bulgaria Department of Programming and Computer Technologies Technical University of Sofia Bulgaria Experian Bulgaria Bulgaria

ISBN: (纸本)9781450309172

The GRID infrastructure provides an aggregation of a wide variety of distributed resources for solving large-scale data intensive problems in various fields. The aim of this paper is to propose a method for grid resource management based on lottery scheduling. The lottery scheduling algorithm is implemented as an extension of GridSim simulator that integrates an additional strategy for planning and resource management. © 2011 ACM.

关键词： Scheduling algorithms

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An approach to convert scientific data description

An approach to convert scientific data description

引用

6th IEEE International Conference on Intelligent Data Acquisition and Advanced Computing Systems: Technology and Applications, IDAACS'2011

作者： Gancheva, Veska Shishedjiev, Bogdan Kalcheva-Yovkova, Elena Programming and Computer Technologies Department Technical University of Sofia 1000 Kliment Ohridski 8 boul. Bulgaria

ISBN: (纸本)9781457714238

Data obtained from the scientific experiments are heterogeneous and distributed. They are stored in different file formats so it is difficult to be integrated, analyzed, processed and visualised. Scientific experiments require effective and efficient data management. In this paper an approach to convert raw data obtained from scientific experiments into relational database using XML based description is proposed. The approach is tested and verified by database and web service implementations. The implemented web service provides authorized access to the experimental data. In order to provide a secure data transmission and data access the database is encrypted through an asymmetric 128-bit encrypting method implementation based on public and private key. A number of experiments using specific scientific data obtained from various experimental instruments are conducted to illustrate the usage of the proposed approach. © 2011 IEEE.

关键词： Data description

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Security as a service model in SOA

Security as a service model in SOA

引用

11th WSEAS International Conference on AIC'11, 4th WSEAS International Conference on BEBI'11, International Conference on Environment, Economics, Energy, Devices, Systems, Communications, computers, Pure and Applied Mathematics

作者： Georgieva, Juliana Goranova, Mariana Department of Programming and Computer Technologies Technical University of Sofia Bul. Kl. Ohridski 8 bl. 2 Sofia Bulgaria

ISBN: (纸本)9781618040282

The software architecture requires interoperable security mechanisms. This article focuses on applying security requirements to service-oriented solution design. SOA security is very much concerned with what the system is supposed to do and what can go wrong. This article presents the service-oriented approach - security services that can be developed and tested and applied against many types of applications or scenarios. The proposed concept has the contribution to allow for SSAS (Software Security as a Service) providers to provide access to software services without requiring the customer to host this service within their local environment. In this model, the access control decision and (ideally) enforcement functionality is not embedded within an application. The split of enforcement and decision point has its advantages.

关键词： Interoperability

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XML to DRF scientific data transformation

XML to DRF scientific data transformation

引用

作者： Gancheva, Veska Department of Programming and Computer Technologies Technical University of Sofia 8 Kliment Ohridski Boul. 1756 Sofia Bulgaria

ISBN: (纸本)9789604742974

Data obtained from the scientific experiments are heterogeneous and distributed. They are stored in different file formats so it is difficult to be integrated, analyzed, and processed. The aim of this paper is to propose an ontology dependent approach to transform XML based scientific data description into RDF instances in order to using them as a complete resource on the Semantic Web. The transforming process includes: establishing an ontology describing the data semantic and links between the elements of the output RDF file;establishing a mapping document defining the relationship between the input XML Schema file and the OWL ontology. The proposed approach has been verified successfully as web service implementation utilizing specific scientific experimental data.

关键词： Ontology

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An approach to convert scientific data description

An approach to convert scientific data description

引用

IEEE International Workshop on Intelligent Data Acquisition and Advanced Computing Systems: Technology and Applications

作者： Veska Gancheva Bogdan Shishedjiev Elena Kalcheva-Yovkova Programming and Computer Technologies Department Technical University of Sofia Bulgaria

关键词： Web services XML Relational databases Encryption Data visualization

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