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Treatment with metal–organic frameworks (MOFs) elicits secondary metabolite accumulation in Aquilaria crassna (agarwood) callus culture

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Discover Plants 2025年第1期2卷 1-9页

作者： Overmans, Sebastian Alflayyeh, Yazan Gutiérrez, Sergio Aldlaigan, Yousef Lauersen, Kyle J. Bioengineering Program Biological and Environmental Sciences and Engineering Division King Abdullah University of Science and Technology (KAUST) Jeddah Kingdom of Saudi Arabia Plant Tissue Culture & Biotechnology Center Ministry of Environment Water and Agriculture of Saudi Arabia (MEWA) Riyadh Kingdom of Saudi Arabia

Thymelaceaous trees are prized for accumulating fragrant resins composed of hundreds of secondary metabolites in their woody tissues. Slow growth and increasing consumer demand have stretched natural sources of agarwood trees to being endangered and alternative production modes, including silviculture and tissue culture, are currently being investigated. Dedifferentiated tissue culture of agarwood trees provides a means of cell propagation independent of environmental context. However, secondary metabolite accumulation, as found in fragrant resins, occurs largely in response to wounding. Here, we investigated the application of metal-organic frameworks (MOFs) as potential elicitors of secondary metabolite formation in Aquilaria crassna tissue culture. Callus cultures were exposed to five commercially available MOFs (UiO-67, MOF-808, HKUST-1, ZIF-67, and MOF-74) and ethanol extracts were analysed using GC-MS to quantify secondary metabolite accumulation in MOF-exposed cultures compared to untreated cultures. Samples that were exposed to either of the two Zr-based MOFs exhibited metabolite production profiles that were similar to each other, (trans-2-Carboxy-cyclo-hexyl)-acetic acid was reduced in the presence of all MOFs, the Cu-containing HKUST-1 MOF increased palmitic acid levels, and ZIF-67 (at 20 mg/L) was found to elicit the highest accumulation of secondary metabolites with potential fragrance applications. These results demonstrate the possibility of eliciting secondary metabolites from dedifferentiated agarwood tree cell culture and may provide an alternative means of sourcing fragrant specialty chemicals from these plants.

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Navigating Legal Frameworks for National Resilience: A Comparative Analysis of Key Disaster Management Laws in Thailand and Japan

Navigating Legal Frameworks for National Resilience: A Compa...

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First International Symposium on Instrumentation, Control, Artificial Intelligence, and Robotics (ICA-SYMP)

作者： Ampan Laosunthara Ratchaneekorn Thongthip Kodchakorn Krutphong School of Environment and Society Institute of Science Tokyo Tokyo Japan Department of Civil & Infrastructure Engineering Disaster Preparedness Mitigation and Management School of Engineering and Technology Asian Institute of Technology (AIT) Pathumthani Thailand Environmental Engineering and Disaster Management Program Mahidol University Kanchanaburi Thailand

ISBN: (数字)9798331505400

ISBN: (纸本)9798331505417

This study compares the disaster management laws of Thailand and Japan. The research reveals significant differences in legislative approaches, reflecting each country's unique historical, and governance contexts. Japan's law demonstrates a more comprehensive approach to the disaster management cycle and stakeholder involvement, with integrated financial provisions. Thailand's law emphasizes organizational aspects. Both prioritize response measures but show potential gaps in addressing preparedness and mitigation phases. The study identifies areas for further investigation, including financial measures, and international cooperation approaches. This comparative analysis offers valuable insights into both countries' ongoing development of disaster management systems and highlights potential areas for mutual learning and improvement in disaster risk reduction strategies. Creating resilience in the society through the core of the government working and stakeholders' given authorities.

关键词： Phase measurement Law Prevention and mitigation Disasters Area measurement Legislation Frequency measurement Stakeholders Robots Resilience

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Epilithic biofilm as a potential biomonitor for microplastics contamination in Brantas River of Malang City, Indonesia

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Case Studies in Chemical and environmental engineering 2025年 11卷

作者： Anggayasti, Wresti L. Pramudia, Zulkisam Susanti, Yogita A.D. Al Zamzami, Ilham Misbakudin Moehammad, Khibar Syiar Wardana, I Nyoman Gede Kurniawan, Andi Environmental Sciences Study Program of Universitas Brawijaya Malang Indonesia Aquaculture Study Program Faculty of Fisheries and Marine Science Universitas Brawijaya Malang Indonesia Aquatic Resources Management Study Program Faculty of Fisheries and Marine Science Universitas Brawijaya Malang Indonesia Mechanical Engineering Department Faculty of Engineering Universitas Brawijaya Malang Indonesia

Despite being an efficient bioremediation agent, aquatic biofilm's usefulness as a biomonitor has not been explored extensively. This study disclosed the potential of epilithic biofilm as biomonitor by comparing its metagenomics with water quality parameters and microplastic count in Brantas River. Metagenomics showed the epilithic biofilm was dominated by Exiguobacterium, which recognizes and degrades microplastics, along with Rhodobacterium and Rhizobiales. For the first time, biofilm microbes and their respective roles were discovered to correspond to the total microplastic counts in comparison with BOD as the only transgressing physicochemical parameter. Thus, epilithic biofilm is a potential biomonitor for riverine microplastic contaminations. © 2024 The Author(s)

关键词： Epilithic biofilm Metagenomics Microplastic biomonitor River pollution Water physicochemical parameters

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Critical review on the abatement of endocrine disrupting chemicals using synthesized iron-based materials in persulfate systems: Reactive species, reaction mechanisms, and perspectives

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Chemical engineering Journal 2025年 511卷

作者： Sun, Ye Huang, Ying Zheng, Shujie Chen, Haojia Pei, Jianchuan Yang, Yan Ji, Hongbing Han, Changseok School of Chemical Engineering and Light Industry School of Environmental Science and Engineering Guangdong University of Technology Guangzhou510006 China School of Environment Hangzhou Institute for Advanced Study UCAS Hangzhou310024 China School of Chemistry and Chemical Engineering Guangxi Key Laboratory of Petrochemical Resource Processing and Process Intensification Technology Guangxi University Nanning530004 China Synergy Innovation Institute of Guangdong University of Technology Shantou515041 China School of Environment and Resources Zhejiang A&F University Hangzhou311300 China Department of Environmental Engineering INHA University Incheon22212 Korea Republic of Program in Environmental and Polymer Engineering of INHA University Incheon22212 Korea Republic of

Persulfate-based advanced oxidation processes have emerged as promising technologies for mitigating endocrine-disrupting chemicals (EDCs) in wastewater treatment. Economically viable Fe-based materials with tailored properties have demonstrated significant efficacy in activating persulfate for the decomposition of EDCs through both radical routes (∙OH, SO4∙−, and O2∙−) and non-radical routes (1O2, surface activated PS complex, and high-valent Fe species). This review summarized the latest advancements in the persulfate activation mechanisms mediated by Fe-based materials, categorized by Fe valence states and the types of reactive species. Furthermore, it critically assesses the influence of active sites of Fe-based catalysts on persulfate activation pathways and summarizes the selective reaction of reactive species towards EDCs. Despite these advancements, several challenges persist in non-radical route-dominated persulfate activation, particularly regarding the impact of Fe-Fe distance on the reactive species and the catalytic role of Fe-based materials for reactions between inorganic ions and persulfate. This review proposes prospective research directions, provides design strategies, and expands the application of Fe-based materials in PS activation for effective EDC abatement in real situations. © 2025 Elsevier B.V.

关键词： Chemical activation

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Effects of ambient silicic acid concentration on the physiology of marine cyanobacterial Synechococcus

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Marine environmental Research 2025年 209卷 107220页

作者： Ou, Qiang Xu, Huo Zhang, Zhen Ma, Jie Pan, Ke Shenzhen Key Laboratory of Marine Microbiome Engineering Institute for Advanced Study Shenzhen University Shenzhen China SZU-HKUST Joint PhD Program in Marine Environmental Science Shenzhen University Shenzhen China Department of Ocean Science The Hong Kong University of Science and Technology Hong Kong

The marine cyanobacterium Synechococcus can accumulate significant amounts of silicon (Si) within its cells, potentially contributing to the vertical transport of biogenic Si in the ocean. This has prompted interest in understanding the uptake, subcellular distribution, and chemical forms of Si in Synechococcus. The surprisingly high intracellular Si concentration could have important impacts on Synechococcus physiology, but these effects have been relatively unexplored. In this study, we investigated the effects of external Si concentrations, [Si(OH)4], on the cell physiology of two strains of Synechococcus (CC9311 and WH7803). Increased ambient [Si(OH)4] significantly enhanced total cellular and water-soluble Si content in Synechococcus, but had little effect on their growth. However, the cell size, volume and photosynthetic performance were significantly reduced in strain WH7803, indicating some harmful effects in the cell. Increases in ambient [Si(OH)4] also altered the Derjaguin-Muller-Toporov (DMT) modulus, adhesion, surface potential and elemental composition of the Synechococcus cells. Notably, significant changes in area-specific adsorbed metals and volume-specific metal content were observed at higher [Si(OH)4] levels, suggesting Si availability in seawater could markedly impact the interactions between Synechococcus cell and environment. Overall, this study provides new insights into the physiological adaptations of marine cyanobacterium Synechococcus to varying environmental silicic acid concentrations. © 2025 Elsevier Ltd

关键词： Psychophysiology

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Enhancing methanogenesis from long-chain fatty acids (LCFA) and enrichment of novel bacteria with resuscitation-promoting factors

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Bioresource Technology 2025年 432卷 132663页

作者： Fang, Bo Liu, Yi-Fan Wei, Hao-Xun Zhou, Lei Yang, Shi-Zhong Gu, Ji-Dong Mu, Bo-Zhong State Key Laboratory of Bioreactor Engineering and School of Chemistry and Molecular Engineering East China University of Science and Technology 130 Meilong Road Shanghai200237 China Environmental Science and Engineering Program Guangdong Technion Israel Institute of Technology 241 Daxue Road Guangdong Shantou515063 China Engineering Research Center of Microbial Enhanced Oil Recovery East China University of Science and Technology 130 Meilong Road Shanghai200237 China

Long-chain fatty acids (LCFA) are important intermediate metabolites in lipid hydrolysis during anaerobic digestion for biogas production. High LCFA loads inhibit microbial activity by toxicity, impairing the coupling of β-oxidation and methanogenesis, thus reducing LCFA degradation efficiency. This study employed and tested seven stimulants, including the resuscitation-promoting factors (Rpf and YeaZ), the quorum-sensing molecules (cAMP, and AHLs), the chemical stimulants (pyruvate), the growth promoter (fumarate), and yeast extract + peptone (YP) for enhancement of methanogenic degradation of LCFA. The results indicate that the chemical stimulants and resuscitation-promoting factors enhanced maximum methane-production rate 1.58 to 2.20 fold versus the NS, reducing the lag phase by 1.46–9.76 days. Analysis of the microbial community composition revealed that the quorum sensing factors only increased species richness, while Rpf, YeaZ fumarate, and YP stimulated the growth of core members of the communities. Metagenomic analysis detected three previously unreported LCFA-degrading bacterial taxa, Marinisomatota, Thermoanaerobaculaceae and Pelomonas. Particularly, Rpf and YeaZ significantly enriched LCFA-degrading bacteria such as Syntrophomonadaceae, Leptospiraceae, and Marine Group B within the core species, while YeaZ also stimulated methanogenic bacteria, possibly due to resuscitating dormant microbes from unfavorable conditions. Syntrophic interactions between LCFA degraders and non-degraders, rather than methanogen abundance, govern methanogenic LCFA degradation. These results demonstrate that the use of stimulants is an effective approach to enhance LCFA degradation and provide a new pathway for energy recovery. © 2025 Elsevier Ltd

关键词： Methanogens

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Cytocompatible and antibacterial Fe-, Cu- and Zn-substituted calcium hydroxyapatite materials for skin applications

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Ceramics International 2025年第9期51卷 11286-11296页

作者： Lukaviciute, L. Lukowiak, A. Stankeviciute, Z. Junka, A. Mortimer, M. Zarkov, A. Yang, J.-C. Ganceviciene, R. Kareiva, A. Faculty of Chemistry and Geosciences Vilnius University Naugarduko st. 24 Vilnius03225 Lithuania Institute of Low Temperature and Structure Research Polish Academy of Sciences Okolna 2 Wroclaw50422 Poland Department of Pharmaceutical Microbiology and Parasitology Wroclaw Medical University Borowska 211A Wroclaw50556 Poland Laboratory of Environmental Toxicology National Institute of Chemical Physics and Biophysics Akadeemia tee 23 Tallinn12618 Estonia Graduate Institute of Nanomedicine and Medical Engineering International Ph.D. Program in Biomedical Engineering College of Biomedical Engineering Research Center of Biomedical Device Research Center of Digital Oral Science and Technology Taipei Medical University Taiwan Faculty of Medicine Vilnius University M.K. Ciurlionio st. 21 Vilnius03101 Lithuania

Calcium hydroxyapatite (C10(PO4)6(OH)2;CHAp) and metal-substituted samples (Fe:CHAp, Cu:CHAp, and Zn:CHAp) were synthesized using a recently developed method. This method involved the wet precipitation of amorphous calcium phosphate (ACP), followed by solid-state reaction synthesis of α-tricalcium phosphate (α-TCP), and finally hydrothermal synthesis of CHAp. The effect of Fe3+, Cu2+, and Zn2+ substitution on the phase purity and antimicrobial properties of CHAp are summarized in this study. Notably, it highlights the phase purity of CHAp and Zn:CHAp (in the presence of Fe3+ and Cu2+ ions, the α- and β-TCP phases have formed) as well as the antimicrobial activity of Zn:CHAp and Cu:CHAp against Staphylococcus aureus and Candida albicans. The synthesized nanosized CHAp, Fe:CHAp, Cu:CHAp, and Zn:CHAp samples were used as additives in the preparation of skin creams. In vitro biological studies of the resulting skin creams demonstrated their antimicrobial activity against Pseudomonas aeruginosa, and showed a reduction in osteoblasts cells viability of in the range of 20–40 %. The addition of zinc enhances antimicrobial efficacy but reduces biocompatibility, while copper maintains both high antimicrobial activity and biocompatibility, making it more suitable for the development of medical or cosmetic materials. Dermal creams containing CHAp with copper and iron ions also show significant antimicrobial activity while preserving good cell viability. These results highlight the importance of optimizing the balance between antimicrobial effectiveness and biocompatibility in these materials. © 2024

关键词： Biocompatibility

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Trace element removal from wastewater by agricultural biowastes: A data analysis on removal efficacy and optimized conditions

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science of the Total Environment 2025年 975卷 179235页

作者： Shahid, Muhammad Khalid, Sana ALOthman, Zeid A. Al-Kahtani, Abdullah A. Bibi, Irshad Naz, Rabia Natasha, Natasha Niazi, Nabeel Khan Iqbal, Jibran Han, Changseok Shah, Noor S. Murtaza, Behzad Department of Environmental Sciences COMSATS University Islamabad Vehari Campus Vehari61100 Pakistan Department of Chemistry College of Science King Saud University Riyadh11451 Saudi Arabia School of Geography Earth and Atmospheric Sciences University of Melbourne MelbourneVIC3053 Australia Department of Biosciences COMSATS University Islamabad Islamabad Campus Islamabad44000 Pakistan Institute of Soil and Environmental Sciences University of Agriculture Faisalabad Faisalabad38040 Pakistan Department of Environmental Sciences and Sustainability College of Natural and Health Sciences Zayed University Abu Dhabi144534 United Arab Emirates Department of Environmental Engineering INHA University Incheon22212 Korea Republic of Program in Environmental & Polymer Engineering INHA University Incheon22212 Korea Republic of Department of Chemistry COMSATS University Islamabad Abbottabad Campus Abbottabad22060 Pakistan

Valorization of agricultural biowastes to biosorbents provides an excellent opportunity to recycle these wastes into valuable products and filtration of contaminants, especially potentially toxic trace elements in aquatic ecosystems. Water contamination with potentially toxic trace elements is a widespread global issue. Various agricultural biosorbents have been tested to remove trace elements from wastewater. Despite abundant research, there are scarce studies regarding the critical data analysis on trace elements removal efficiency by agricultural biowastes under various conditions. This review critically delineates the data analysis of recent literature published from 2018 to 2024 for a critical comparison of different agricultural biosorbents and the applied conditions to remove trace elements from aqueous media. Data analysis (based on 1188 observations) revealed that the mean trace element removal by agricultural biowaste-derived biosorbents from contaminated water was 75 %, ranging from 2 to 100 %. The most frequently reported removal efficiencies of agricultural biosorbents were 90–100 %. Notably, few agricultural biosorbents such as banana peel demonstrated the highest removal efficiency of 97 %, followed by cassava peels at 92 %, emphasizing the significance of recycling these materials for sustainable trace element removal from wastewater. Data analysis revealed that the trend for trace element removal from wastewater follows a descending order, with zinc exhibiting the highest removal rate at 81 %, followed closely by lead at 80 %. This trend continues with arsenic at 75 %, nickel and cadmium both at 70 %, and so forth. Thus, agricultural biosorbents play a pivotal role in this process, showcasing their potential in waste valorization and environmental remediation. Hence, the present review article is expected to contribute towards the comparative efficiency of various agricultural biosorbents, and the selection of the best biosorbents, depending on appl

关键词： Biowaste Metal removal and recovery Reusing and recycling Sustainable technology

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NMD-mediated posttranscriptional regulation fine-tunes the NLR-WRKY regulatory module to modulate bacterial defense response

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Plant science 2025年 356卷 112528页

作者： Nasim, Zeeshan Karim, Nouroz Blilou, Ikram Ahn, Ji Hoon Department of Molecular Life Sciences Korea University Seoul 02841 South Korea Plant Science Program Biological and Environmental Science and Engineering Division (BESE) King Abdullah University of Science and Technology (KAUST) Thuwal 23955-6900 Saudi Arabia

Nonsense-mediated mRNA decay (NMD) is a conserved eukaryotic surveillance system that maintains transcriptome integrity by degrading aberrant RNA transcripts. NMD ensures proper growth and development by preventing autoimmunity through the direct regulation of nucleotide-binding, leucine-rich repeat (NLR) genes. Whether NMD directly regulates WRKY genes remains unclear, despite their upregulation in NMD-deficient plants, and potential feedback between NLRs and WRKYs is also poorly understood. In this study, we showed that NMD also directly regulates a subset of WRKY (WRKY15, 18, 25, 33, 46, 60, and 70) genes, particularly at lower temperatures (16°C). NMD signature-containing transcripts of WRKY46 and WRKY70, selected as representative NMD-regulated WRKY genes, showed increased half-lives in NMD-deficient mutants. Transcriptome analyses showed that these seven NMD-regulated WRKY genes are induced in response to bacterial infection. Potential homologues of these seven NMD-regulated WRKY genes in maize and rice showed similar induction in response to bacterial pathogen infection. Furthermore, these NMD-regulated WRKY genes are induced in plants overexpressing RESISTANT TO P. SYRINGAE 4 (RPS4) in a temperature-dependent manner. By using ChIP-seq and DAP-seq data of WRKY transcription factors, we showed that WRKYs potentially regulate a significant number of NLR genes by directly binding to the W-box in their promoter regions. Taken together, our findings revealed that in addition to the NLRs, the NMD machinery also regulates WRKY genes to keep the basal defense levels in check and the WRKY transcription factors directly regulate NLR genes to constitutes a positive feedback regulatory loop to optimize the plant response to invading pathogens. © 2025 Elsevier B.V.

关键词： Arabidopsis Defense NLR NMD UPF WRKY

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Investigation of Cyanobacteria-Hosted Antibiotic Resistance Genes in Cyanohab-Impacted Drinking Water Sources

SSRN

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SSRN 2025年

作者： Volk, Abigail Mills, Molly Chae, Soryong Lee, Jiyoung Division of Environmental Health Sciences College of Public Health The Ohio State University ColumbusOH United States Environmental Sciences Graduate Program The Ohio State University ColumbusOH United States Department of Chemical and Environmental Engineering University of Cincinnati CincinnatiOH United States Department of Food Science and Technology The Ohio State University ColumbusOH United States Infectious Diseases Institute The Ohio State University ColumbusOH United States

Freshwater cyanobacterial blooms (cyanoHABs) produce cyanotoxins that cause human and animal illness. cyanoHABs are also hypothesized to play a role in the antibiotic resistome, but whether Cyanobacteria host clinically-relevant antibiotic resistant genes (ARGs) in the environment is largely unknown. To investigate this emerging issue, we looked for the presence of Cyanobacteria-hosted ARGs using shotgun metagenomic sequencing of drinking water source samples collected during the 2022 bloom season from Lake Erie and Grand Lake St. Marys (GLSM). . ARGs were annotated using DeepARG and Resistance Gene Identifier (RGI). Cyanobacteria were annotated to host genes conferring possible antibiotic resistance. Two of these genes were rpoB2 and arlR, but these genes were likely spurious hits on housekeeping genes. qac and OXA genes were also annotated. While those hits suggest potential resistance to clinical antibiotics, overall Cyanobacteria did not host appreciable clinically-relevant ARGs. Because the two drinking water sources historically have high cyanotoxin concentrations, selected cyanotoxins, Cyanobacteria, and ARGs were chosen for quantification. We found high levels of Microcystis in Lake Erie and Planktothrix in GLSM, and high microcystin concentrations in GLSM, supporting previous trends in these water bodies. This study takes a novel approach pairing the issues of cyanoHABs and ARGs together in two drinking water sources. In a changing climate, drinking water treatment strategies should consider the treatment and public health implications of multiple contaminants. © 2025, The Authors. All rights reserved.

关键词： Lakes

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