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检索条件"机构=Faculty of Bioengineering and Bioinformatics"
153 条 记 录,以下是61-70 订阅
排序:
Molecular Modeling of Penicillin Acylase Binding with a Penicillin Nucleus by High Performance Computing: Can Enzyme or its Mutants Possess β-lactamase Activity?
Supercomputing Frontiers and Innovations
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Supercomputing Frontiers and Innovations 2022年 第2期9卷 68-78页
作者: Kirilin, Evgeny M. Bochkova, Anna A. Panin, Nikolay V. Pochinok, Igor V. Švedas, Vytas Lomonosov Moscow State University Belozersky Institute of Physicochemical Biology Moscow Russia Lomonosov Moscow State University Research Computing Center Moscow Russia Lomonosov Moscow State University Faculty of Bioengineering and Bioinformatics Moscow Russia
High-performance computing has been used for molecular modeling of penicillin acylase interaction with a penicillin nucleus 6-aminopenicillanic acid (6-APA) to assess whether the wild-type enzyme or its mutants could ... 详细信息
来源: 评论
Limits on inferring gene regulatory networks from single-cell measurements of unstable mRNA levels
Limits on inferring gene regulatory networks from single-cel...
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IEEE Conference on Decision and Control
作者: Tarun Mahajan Michael Saint-Antoine Roy D. Dar Abhyudai Singh Department of Bioengineering University of Illinois at Urbana-Champaign Urbana IL USA Center for Bioinformatics and Computational Biology University of Delaware Newark DE USA Faculty of Department of Bioengineering University of Illinois at Urbana-Champaign Urbana IL USA Faculty of Electrical and Computer Engineering Biomedical Engineering and Mathematical Sciences University of Delaware Newark DE USA
Gene regulatory network inference from single-cell expression data, such as single-cell RNA sequencing, is a popular problem in computational biology. Despite diverse methods spanning information theory, machine learn... 详细信息
来源: 评论
Cryo-EM structure of the bullet-shaped GroEL-GroES complex at 3.6 Å resolution
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Microscopy and Microanalysis 2021年 第S1期27卷 1120-1121页
作者: Evgeny Pichkur Sofia Kudryavtseva Igor Yaroshevich Vladimir Muronetz Olga Sokolova Tatiana Stanishneva-Konovalova 1National Research Center “Kurchatov Institute” United States Lomonosov Moscow State University Faculty of Bioengineering and Bioinformatics United States Lomonosov Moscow State University United States Moscow Lomonosov University United States
来源: 评论
Making Synchrosqueezing Locally Adaptive in The Time-Frequency Plane
Making Synchrosqueezing Locally Adaptive in The Time-Frequen...
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International Conference on Acoustics, Speech, and Signal Processing (ICASSP)
作者: Marcelo A. Colominas Sylvain Meignen Universidad Nacional de Entre Ríos (UNER) Faculty of Engineering Institute for Research and Development in Bioengineering and Bioinformatics (IBB) CONICET Argentina Jean Kuntzmann Laboratory University Grenoble Alpes and CNRS France
In this work, we explore the problem of making synchrosqueezing transform adaptive. To deal with multicomponent signals, existing methods use a fixed order N, thus assuming all the modes making up the signal have orde... 详细信息
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Computational Alchemy Using Accelerated GPU Calculations: Fine Structural Tuning Inhibitors of L,D-transpeptidase 2 from Mycobacterium tuberculosis
Supercomputing Frontiers and Innovations
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Supercomputing Frontiers and Innovations 2022年 第3期9卷 72-86页
作者: Baldin, Semen M. Shegolev, Vsevolod O. Švedas, Vytas K. Lomonosov Moscow State University Belozersky Institute of Physicochemical Biology Moscow Russia Lomonosov Moscow State University Research Computing Center Moscow Russia Lomonosov Moscow State University Faculty of Chemistry Moscow Russia Lomonosov Moscow State University Faculty of Bioengineering and Bioinformatics Moscow Russia
The computational alchemy is based on equilibrium methods of molecular dynamics (MD), including thermodynamic integration (TI) or free energy perturbation (FEP). It makes it possible to evaluate the energy characteris... 详细信息
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Translating from Na to Ca : Na/Ca-exchanger exerts Na -dependent control over astrocytic Ca oscillations
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The European Physical Journal Plus 2021年 第7期136卷 1-16页
作者: Verisokin, Andrey Yu. Verveyko, Darya V. Kucherenko, Varvara V. Postnov, Dmitry E. Brazhe, Alexey R. Department of Theoretical Physics Kursk State University Kursk Russia Faculty of Bioengineering and Bioinformatics Lomonosov Moscow State University Moscow Russia Saratov State National Research University Saratov Russia Biological Faculty Lomonosov Moscow State University Moscow Russia Department of Molecular Neurobiology Institute of Bioorganic Chemistry RAS Moscow Russia
Recently accumulated evidences suggest that astrocyte signaling is in touch link with extracellular volume regulation and interstitial fluid drainage from the brain. Classical understanding of astrocyte activity is ba...
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Osteogenic activity of bone: Novel approach of polyvinylidene fluoride films, marrow blood supply, and ultrasound stimulation
SPE Polymers
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SPE Polymers 2023年 第4期4卷 175-185页
作者: Zuchuat, Jésica Halter, Christian Zalazar, Martín Faculty of Engineering National University of Entre Ríos Entre Ríos Argentina Institute for Research and Development in Bioengineering and Bioinformatics UNER – CONICET Entre Ríos Argentina
Electric fields used in bone stimulation are based on the application of direct current, but some drawbacks exist, such as the need for an external power source. Piezoelectric poly(vinylidene fluoride) (PVDF) has attr... 详细信息
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Modulatory effect of NCX on IP3-dependent Ca2+oscillations in astrocytes
Modulatory effect of NCX on IP3-dependent Ca2+oscillations i...
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Saratov Fall Meeting 2020 - Computations and Data Analysis: From Molecular Processes to Brain Functions
作者: Verisokin, Andrey Yu. Verveyko, Darya V. Kucherenko, Varvara V. Postnov, Dmitry E. Brazhe, Alexey R. Department of Theoretical Physics Kursk State University Radishcheva st. 33 Kursk305000 Russia Saratov State National Research University Astrakhanskaya st. 83 Saratov Russia Biological Faculty Lomonosov Moscow State University Leninskie Gory 1/24 Moscow Russia Faculty of Bioengineering and Bioinformatics Lomonosov Moscow State University Leninskie Gory 1/73 Moscow Russia Department of Molecular Neurobiology Institute of Bioorganic Chemistry RAS Miklukho-Maklay str 16/10 Moscow Russia
Most of the existing models of calcium dynamics of astrocytes do not take into account the effect of the Na/Ca- exchanger on the formation of calcium oscillations and their properties. However, recent experimental stu... 详细信息
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A Hybrid of Bat Algorithm and Minimization of Metabolic Adjustment for Succinate and Lactate Production  14th
A Hybrid of Bat Algorithm and Minimization of Metabolic Adju...
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14th International Conference on Practical Applications of Computational Biology and bioinformatics, PACBB 2020
作者: Man, Mei Yen Mohamad, Mohd Saberi Choon, Yee Wen Ismail, Mohd Arfian Artificial Intelligence and Bioinformatics Research Group Faculty of Computing Universiti Teknologi Malaysia SkudaiJohor81310 Malaysia Institute for Artificial Intelligence and Big Data Universiti Malaysia Kelantan City Campus Pengkalan Chepa Kota BharuKelantan16100 Malaysia Faculty of Bioengineering and Technology Universiti Malaysia Kelantan Jeli Campus JeliKelantan17600 Malaysia College of Computing and Applied Sciences Universiti Malaysia Pahang Lebuhraya Tun Razak Gambang KuantanPahang Darul Makmur26300 Malaysia
The elementary concept of metabolic engineering is to manipulate those potential genes to augment the yields of metabolite production by restructuring and deregulating the metabolic networks. However, the yields of bi... 详细信息
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Identification of hedgehog signaling as a potential oncogenic driver in an aggressive subclass of human hepatocellular carcinoma: A reanalysis of the TCGA cohort
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Science China(Life Sciences) 2019年 第11期62卷 1481-1491页
作者: Yang Zhao Li Zhang Yong Zhang Bo Meng Wantao Ying Xiaohong Qian College of Life Science and Bioengineering Beijing University of TechnologyBeijing 100124China State Key Laboratory of Proteomics Beijing Proteome Research CenterNational Center for Protein Sciences(Beijing)Beijing Institute of LifeomicsBeijing 102206China Center for Bioinformatics and Computational Biology Institute of Biomedical SciencesSchool of Life SciencesEast China Normal UniversityShanghai 200241China School of Statistics Faculty of Economics and ManagementEast China Normal UniversityShanghai 200241China Key Lab of Transplant Engineering and Immunology West China-Washington Mitochondria and Metabolism Research CenterWest China HospitalSichuan UniversityChengdu 610041China
Hepatocellular carcinoma(HCC)is a heterogeneous disease and the second most common cause of cancer-related death *** developments in genomic technologies helped scientists to understand the heterogeneity of HCC and id... 详细信息
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