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Complete spline interpolation and exponential parameterization for length estimation of curves

AIP Conference Proceedings 2017年第1期1863卷

作者： R. Kozera L. Noakes M. Wilkołazka 1Warsaw University of Life Sciences - SGGW Faculty of Applied Informatics and Mathematics Nowoursynowska str. 159 02-776 Warsaw Poland 3John Paul II Catholic University of Lublin Faculty of Mathematics Information Technology and Landscape Architecture Konstantynó w str. 1H 20-708 Lublin Poland 4The University of Western Australia School of Computer Science and Software Engineering 35 Stirling Highway Crawley W.A. 6009 Perth Australia 2The University of Western Australia School of Mathematics and Statistics 35 Stirling Highway Crawley W.A. 6009 Perth Australia

We describe the problem of estimating a length of a regular parameterized curve from an ordered sample of interpolation points in arbitrary Euclidean space by modified complete spline. The corresponding tabular parameters are assumed to be unknown and are approximated by the exponential parameterization (controlled by the parameter λ ∈ [0, 1]). In this paper the numerical verification of asymptotic orders α(λ) in length estimation is performed for curves sampled more-or-less uniformly. The numerical experiments confirm a slow linear convergence orders α(λ) = 1 for all λ ∈ [0, 1) and a quartic order α(1) = 4 once modified complete spline is used.

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Correction to: Einstein, von Frisch and the honeybee: a historical letter comes to light

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Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology 2021年第4期207卷 457页

作者： Adrian G Dyer Andrew D Greentree Jair E Garcia Elinya L Dyer Scarlett R Howard Friedrich G Barth School of Media and Communication RMIT University Melbourne VIC 3001 Australia. Department of Physiology Monash University Clayton VIC 3800 Australia. ARC Centre of Excellence for Nanoscale BioPhotonics School of Science RMIT University Melbourne VIC 3001 Australia. Department of Computer Science and Software Engineering Swinburne University of Technology Hawthorn VIC 3122 Australia. Centre for Integrative Ecology School of Life and Environmental Sciences Deakin University Burwood VIC 3217 Australia. Department of Neurosciences and Developmental Biology Faculty of Life Sciences University of Vienna Althanstr.14 1090 Vienna Austria. friedrich.g.barth@univie.ac.at.

A correction to this paper has been published: https://***/10.1007/s00359-021-01497-z.

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Preface

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CEUR Workshop Proceedings 2022年 3091卷

作者： Kovalev, Igor Semenkin, Eugene Schwenker, Friedhelm Shaidurov, Vladimir Ganchev, Todor Škraba, Andrej Stanimirović, Predrag Kolehmainen, Mikko Kronberger, Gabriel Affenzeller, Michael Brester, Christina Ryzhikov, Ivan Kazakovtsev, Lev Sopov, Evgenii Semenkina, Maria Akhmedova, Shakhnaz Stanovov, Vladimir Krasnoyarsk Regional Science and Technology City Hall Department of Computer Science of Siberian Federal University Krasnoyarsk Russia Siberian Institute of Applied System Analysis named after A.N. Antamoshkin The Department ofsystem analysis and operations research of Reshetnev University Krasnoyarsk Russia Institute of Neural Information Processing Ulm University Ulm Germany The Institute of Computational Modeling SB RAS Krasnoyarsk Russia Technical University of Varna Varna Bulgaria University of Maribor UM Faculty of Organizational Sciences Cybernetics and Decision Support Systems Laboratory Slovenia Department of Computer Science Niš Serbia Department of Environmental and Biological Sciences Environmental Informatics University of Eastern Finland Kuopio Finland University of Applied Sciences Upper Austria Hagenberg Austria Department of Software Engineering School of Informatics Communications and Media University of Applied Sciences Upper Austria Hagenberg Austria University of Eastern Finland UEF · Department of Environmental Science Kuopio Finland The Department of Systems Analysis Reshetnev University of Science and Technology Krasnoyarsk Russia Siberian Institute of Applied System Analysis Krasnoyarsk Russia University of Applied Sciences Upper Austria and Softwarepark Hagenberg Austria Reshetnev Siberian States University of Science and Technology Siberian Institute of Applied System Analysis Krasnoyarsk Russia SibSAU · Institute of computer science and telecommunications Krasnoyarsk Russia

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25th Annual Computational Neuroscience Meeting CNS-2016, Seogwipo City, South Korea, July 2-7, 2016 Abstracts

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BMC NEUROscience 2016年第Sup1期17卷 54-54页

作者： [Anonymous] Computational Neurobiology Laboratory The Salk Institute for Biological Studies San Diego CA USA UNIC CNRS Gif sur Yvette France The European Institute for Theoretical Neuroscience (EITN) Paris France ATR Computational Neuroscience Laboratories 2-2 Hikaridai Seika-cho Soraku-gun Kyoto 619-0288 Japan Krembil Research Institute University Health Network Toronto ON M5T 2S8 Canada Department of Physiology University of Toronto Toronto ON M5S 1A8 Canada Department of Medicine (Neurology) University of Toronto Toronto ON M5T 2S8 Canada Department of Neurophysiology Nencki Institute of Experimental Biology Warsaw Poland Department of Theory Wigner Research Centre for Physics of the Hungarian Academy of Sciences Budapest 1121 Hungary Department of Mathematical Sciences KAIST Daejoen 34141 Republic of Korea Department of Mathematics University of Houston Houston TX 77004 USA Department of Biochemistry & Cell Biology and Institute of Biosciences and Bioengineering Rice University Houston TX 77005 USA Department of Biology and Biochemistry University of Houston Houston TX 77004 USA Grupo de Neurocomputación Biológica Dpto. de Ingeniería Informática Escuela Politécnica Superior Universidad Autónoma de Madrid Madrid Spain Department of Biological Sciences University of Southern California Los Angeles CA USA Center for Neuroscience Korea Institute of Science and Technology Hwarang-ro 14-gil 5 Seongbuk-gu Seoul 02792 South Korea Department of Neuroscience University of Science and Technology 217 Gajeong-ro Yuseong-gu Daejon 34113 South Korea Department of Psychology Yonsei University 50 Yonsei-ro Seodaemun-gu Seoul 03722 South Korea Department of Psychiatry Kyung Hee University Hospital at Gangdong 892 Dongnam-ro Gangdong-gu Seoul 05278 South Korea Department of Psychiatry Veterans Administration Boston Healthcare System and Harvard Medical School Brockton MA 02301 USA Center for Neural Science New York University New York NY 10003 USA Courant Institute

A1 Functional advantages of cell-type heterogeneity in neural circuits Tatyana O. Sharpee A2 Mesoscopic modeling of propagating waves in visual cortex Alain Destexhe A3 Dynamics and biomarkers of mental disorders Mitsuo Kawato F1 Precise recruitment of spiking output at theta frequencies requires dendritic h-channels in multi-compartment models of oriens-lacunosum/moleculare hippocampal interneurons Vladislav Sekulić, Frances K. Skinner F2 Kernel methods in reconstruction of current sources from extracellular potentials for single cells and the whole brains Daniel K. Wójcik, Chaitanya Chintaluri, Dorottya Cserpán, Zoltán Somogyvári F3 The synchronized periods depend on intracellular transcriptional repression mechanisms in circadian clocks. Jae Kyoung Kim, Zachary P. Kilpatrick, Matthew R. Bennett, Kresimir Josić O1 Assessing irregularity and coordination of spiking-bursting rhythms in central pattern generators Irene Elices, David Arroyo, Rafael Levi, Francisco B. Rodriguez, Pablo Varona O2 Regulation of top-down processing by cortically-projecting parvalbumin positive neurons in basal forebrain Eunjin Hwang, Bowon Kim, Hio-Been Han, Tae Kim, James T. McKenna, Ritchie E. Brown, Robert W. McCarley, Jee Hyun Choi O3 Modeling auditory stream segregation, build-up and bistability James Rankin, Pamela Osborn Popp, John Rinzel O4 Strong competition between tonotopic neural ensembles explains pitch-related dynamics of auditory cortex evoked fields Alejandro Tabas, André Rupp, Emili Balaguer-Ballester O5 A simple model of retinal response to multi-electrode stimulation Matias I. Maturana, David B. Grayden, Shaun L. Cloherty, Tatiana Kameneva, Michael R. Ibbotson, Hamish Meffin O6 Noise correlations in V4 area correlate with behavioral performance in visual discrimination task Veronika Koren, Timm Lochmann, Valentin Dragoi, Klaus Obermayer O7 Input-location dependent gain modulation in cerebellar nucleus neurons Maria Psarrou, Maria Schilstra, Neil Davey, Benjamin Torben-Ni

关键词： NEUROscienceS PATHOLOGICAL psychology DENDRITES

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Preface

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CEUR Workshop Proceedings 2022年 3304卷

作者： Jia, Weijia Yin, Jian Hu, Shaolin Peng, Shaoliang Niu, Shaozhang Srinivasa Rao, P.C. Lu, Yao Mirsaeidi, Sohrab Cao, Bin Wu, Yilin Wang, Xingbo Subramaniyam, Kannimuthu Boddu, Raja Sarath Kumar Li, Zhonghua Tao, Qian Zhang, Lei Li, Yi Ding, Deqing Wang, Dahan Zhang, Ziyan AlShawabkeh, Mahmoud Aslam, Muhammad Dib, Omar Sahibuddin, Shamsul Bin Wagh, Sanjeev J. Pardalos, Panos M. Al-Sammarraie, Najeeb Abbas Liu, Linfeng Kong, Jin-Heung Borrego, Carlos Tahir, Sabeen Wu, Zhiheng Li, Jiongcheng Xu, Yong Xie, Zhi Wang, Jiahai Cai, Hongmin Yang, Yuedong Qin, Xiaolin Beijing Normal University Zhuhai China Sun Yat-sen University China Guangdong University of Petrochemical Technology China Hunan University China Beijing University of Posts and Telecommunications China India Beijing Jiaotong University China Hebei University of Technology China Guangdong University of Education China Foshan University China Karpagam College of Engineering India Lenora College of Engineerin India Yat-sen University Guangdong High Performance Computing Society China South China University of Technology China Henan University China Wenzhou University China National University of Defense Technology China Xiamen University of Technology China Hainan Tropical Ocean University China Guangxi Normal University for Nationalities China Wuhan University China Wenzhou-Kean University China School of Software Engineering Universiti Teknologi Malaysia Information Technology Government College of Engineering Karad India Department of Industrial & Systems Engineering University of Florida United States Al-Madinah International University Faculty of Computer and Information Technology Malaysia School of Computer Science and Technology Nanjing University of Posts and Telecommunications China School of Computer and Information Engineering Kwangwoon University Korea Republic of Departament Enginyeria of Information Comunicacions Autonomous University of Barcelona Spain Information Technology Department King AbdulAziz University Jeddah Saudi Arabia Institute of Manufacturing GDAS China Guangdong Planning and Designing Institute of Telecommunications Co. Ltd China Guangzhou Institutes of Biomedicine and Health Chinese Academy of Sciences China Cheng Du Information Technology of Chinese Academy of Sciences Co. Ltd China

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Improving Quality of Life Based on Electronic Patient Reported Outcomes in Patients with CLL and MDS: The Mypal Study

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Blood 2024年 144卷 2358-2358页

作者： Thomas Chatzikonstantinou Maria Vasilopoulou Dimitrios Kyrou Georgios Karakatsoulis Panagiotis Argyropaidas Sotiria Besikli-Dimou Panos Bonotis Maria Chatzimina Jana Didi Christos Demosthenous Tina Garani-Papadatos Stefan Hoffman Christine Kakalou Eleni Kazantzaki Stephan Kiefer Lefteris Koumakis Eva Hellstrom Lindberg Julie Ling Christos Maramis Marcel Meyerheim Lydia Scarfo Institute of Applied Biosciences Centre for Research and Technology Hellas Thessaloniki Greece Institute of Computer Science Foundation for Research and Technology-Hellas Heraklion Greece Center for Molecular Medicine Central European Institute of Technology Masaryk University Brno Czech Republic Hematology Department - BMT Unit G Papanicolaou Hospital Thessaloniki Greece Department of Public Health Policy School of Public Health University of West Attica Athens Greece Promotion Software GmbH Berlin Germany Department of Hematology University of Crete School of Medicine Heraklion Greece Fraunhofer Institute For Biomedical Engineering (IBMT) Sulzbach Germany Center for Hematology and Regenerative Medicine (HERM) Department of Medicine Huddinge Karolinska Institutet Stockholm Sweden European Association for Palliative Care Vilvoorde Belgium Department of Pediatric Oncology and Hematology Faculty of Medicine Saarland University Homburg Germany Strategic Research Program on CLL IRCCS Ospedale San Raffaele Milano Italy Università Vita-Salute San Raffaele Milan Italy

Introduction: Palliative care is a critical component of care for patients with chronic hematological malignancies. Leveraging eHealth approaches can potentially facilitate the delivery of palliative care, leading to improved quality of life (QoL). Methods: The MyPal study (NCT04370457) is a randomized controlled clinical trial assessing an eHealth intervention on QoL of patients. The study was conducted according to the Declaration of Helsinki. The ethical aspects of the study, given the vulnerability of the patients, were addressed with diligence and approvals were obtained from the appropriate Research Ethics Committees. Patients who were receiving or had previously received treatment for CLL or MDS were randomly assigned (1:1) to access the MyPal platform versus standard of care. The MyPal platform included a smartphone application used to report QoL status (ePRO questionnaires) and symptoms. The primary endpoint was QoL at 12 months, assessed by the European Organization for Research and Treatment of Cancer (EORTC) quality of life QLQ-C30 General Questionnaire and the Euroqol 5-dimension (Euroqol EQ-5D-3L). Secondary endpoints included physical and emotional functioning, measured by the Integrated Palliative Care Outcome Scale (IPOS), satisfaction with care, measured by the EORTC Patient Satisfaction with Cancer Care questionnaire PATSAT-C33 (PATSAT-C33), and overall survival (OS). Additionally, the Edmonton Symptom Assessment System (ESAS), the Brief Pain Inventory (BPI), and the Emotion Thermometers (ET) QoL questionnaires were assessed only in the intervention group. Results: A total of 171 patients (97 and 74 in the control and intervention arms, respectively) who answered multiple questionnaires were included in the analysis. The intervention group reported a significant decrease in pain (β2=-0.48 (-0.77, -0.19), p<0.001) compared to the control group (β1=0.3 (0.09, 0.5), p=0.01) as measured by the EORTC QLQ-C30. Communication and pain as measured by IPOS

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MedShapeNet - A Large-Scale Dataset of 3D Medical Shapes for computer Vision

arXiv

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arXiv 2023年

作者： Li, Jianning Zhou, Zongwei Yang, Jiancheng Pepe, Antonio Gsaxner, Christina Luijten, Gijs Qu, Chongyu Zhang, Tiezheng Chen, Xiaoxi Li, Wenxuan Wodzinski, Marek Friedrich, Paul Xie, Kangxian Jin, Yuan Ambigapathy, Narmada Nasca, Enrico Solak, Naida Melito, Gian Marco Vu, Viet Duc Memon, Afaque R. Schlachta, Christopher De Ribaupierre, Sandrine Patel, Rajnikant Eagleson, Roy Chen, Xiaojun Mächler, Heinrich Kirschke, Jan Stefan de la Rosa, Ezequiel Christ, Patrick Ferdinand Li, Hongwei Bran Ellis, David G. Aizenberg, Michele R. Gatidis, Sergios Küstner, Thomas Shusharina, Nadya Heller, Nicholas Andrearczyk, Vincent Depeursinge, Adrien Hatt, Mathieu Sekuboyina, Anjany Löffler, Maximilian Liebl, Hans Dorent, Reuben Vercauteren, Tom Shapey, Jonathan Kujawa, Aaron Cornelissen, Stefan Langenhuizen, Patrick Ben-Hamadou, Achraf Rekik, Ahmed Pujades, Sergi Boyer, Edmond Bolelli, Federico Grana, Costantino Lumetti, Luca Salehi, Hamidreza Ma, Jun Zhang, Yao Gharleghi, Ramtin Beier, Susann Sowmya, Arcot Garza-Villarreal, Eduardo A. Balducci, Thania Angeles-Valdez, Diego Souza, Roberto Rittner, Leticia Frayne, Richard Ji, Yuanfeng Ferrari, Vincenzo Chatterjee, Soumick Dubost, Florian Schreiber, Stefanie Mattern, Hendrik Speck, Oliver Haehn, Daniel John, Christoph Nürnberger, Andreas Pedrosa, João Ferreira, Carlos Aresta, Guilherme Cunha, António Campilho, Aurélio Suter, Yannick Garcia, Jose Lalande, Alain Vandenbossche, Vicky Van Oevelen, Aline Duquesne, Kate Mekhzoum, Hamza Vandemeulebroucke, Jef Audenaert, Emmanuel Krebs, Claudia van Leeuwen, Timo Vereecke, Evie Heidemeyer, Hauke Röhrig, Rainer Hölzle, Frank Badeli, Vahid Krieger, Kathrin Gunzer, Matthias Chen, Jianxu van Meegdenburg, Timo Dada, Amin Balzer, Miriam Fragemann, Jana Jonske, Frederic Rempe, Moritz Malorodov, Stanislav Bahnsen, Fin H. Seibold, Constantin Jaus, Alexander Marinov, Zdravko Jaeger, Paul F. Stiefelhagen, Rainer Santos, Ana Sofia Lindo, Mariana Ferreira, André Alves, Victor Kamp, Michael Abourayya, Amr Nensa, Felix Hörst, Fabian Brehmer, Alexander Hein Girardetstraße 2 Essen45131 Germany Graz University of Technology Inffeldgasse 16c Graz8010 Austria Graz Austria The Department of Computer Science Johns Hopkins University Malone Hall 3400 N Charles St BaltimoreMD21218 United States Rte Cantonale Lausanne1015 Switzerland The Department of Measurement and Electronics AGH University of Science and Technology Krakow Poland Sierre Switzerland Department of Biomedical Engineering University of Basel Hegenheimermattweg Allschwil167C CH-4123 Switzerland The Boston College 140 Commonwealth Ave Chestnut HillMA02467 United States University Hospital B7-200 339 Windermere Road LondonN6A 5A5 Canada The Department of Radiology Renji Hospital School of Medicine Shanghai Jiao Tong University Shanghai200240 China The Research Center for Connected Healthcare Big Data ZhejiangLab Zhejiang Hangzhou311121 China The Faculty of Statistics Technical University Dortmund August-Schmidt-Straße 1 Dortmund44227 Germany The Institute of Mechanics Graz University of Technology Kopernikusgasse 24/IV Graz8010 Austria The Institute of Biomedical Manufacturing and Life Quality Engineering State Key Laboratory of Mechanical System and Vibration School of Mechanical Engineering Shanghai Jiao Tong University 800 Dongchuan Road Shanghai200240 China The Department of Cardiac Surgery Medical University Graz Auenbruggerplatz 29 Graz8036 Austria The Department of Diagnostic and Interventional Radiology University Hospital Giessen Justus-Liebig-University Giessen Klinikstraße 33 Giessen35392 Germany The Department of Mechanical Engineering Mehran University of Engineering and Technology Jamshoro Sindh76062 Pakistan The Institute of Medical Robotics Shanghai Jiao Tong University Shanghai China The Geschäftsführender Oberarzt Abteilung für Interventionelle und Diagnostische Neuroradiologie Universitätsklinikum der Technischen Universität München Ismaningerstr. 22 München81675 Germany icometrix Kolonel Be

Prior to the deep learning era, shape was commonly used to describe the objects. Nowadays, state-of-the-art (SOTA) algorithms in medical imaging are predominantly diverging from computer vision, where voxel grids, meshes, point clouds, and implicit surface models are used. This is seen from numerous shape-related publications in premier vision conferences as well as the growing popularity of ShapeNet (about 51,300 models) and Princeton ModelNet (127,915 models). For the medical domain, we present a large collection of anatomical shapes (e.g., bones, organs, vessels) and 3D models of surgical instrument, called MedShapeNet, created to facilitate the translation of data-driven vision algorithms to medical applications and to adapt SOTA vision algorithms to medical problems. As a unique feature, we directly model the majority of shapes on the imaging data of real patients. As of today, MedShapeNet includes 23 datasets with more than 100,000 shapes that are paired with annotations (ground truth). Our data is freely accessible via a web interface and a Python application programming interface (API) and can be used for discriminative, reconstructive, and variational benchmarks as well as various applications in virtual, augmented, or mixed reality, and 3D printing. Exemplary, we present use cases in the fields of classification of brain tumors, skull reconstructions, multi-class anatomy completion, education, and 3D printing. In future, we will extend the data and improve the interfaces. The project pages are: https://***/ and https://***/Jianningli/*** Codes 68T01 © 2023, CC BY.

关键词： Large dataset

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THE ASTROPY PROJECT: BUILDING AN INCLUSIVE, OPEN-science PROJECT AND STATUS OF THE V2.0 CORE PACKAGE

arXiv

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arXiv 2018年

作者： Price-Whelan, A.M. Günther, H.M. Lim, P.L. Crawford, S.M. Conseil, S. Shupe, D.L. Craig, M.W. Dencheva, N. Ginsburg, A. VanderPlas, J.T. Bradley, L.D. Pérez-Suárez, D. de Val-Borro, M. Aldcroft, T.L. Cruz, K.L. Robitaille, T.P. Tollerud, E.J. Ardelean, C. Babej, T. Bachetti, M. Bamford, S.P. Barentsen, G. Barmby, P. Baumbach, A. Biscani, F. Boquien, M. Bostroem, K.A. Bouma, L.G. Brammer, G.B. Breytenbach, H. Buddelmeijer, H. Burke, D.J. Calderone, G. Cara, M. Cardoso, J.V.M. Cheedella, S. Copin, Y. Crichton, D. D’Avella, D. Deil, C. Depagne, É. Dietrich, J.P. Donath, A. Droettboom, M. Earl, N. Erben, T. Fabbro, S. Ferreira, L.A. Garrison, L.H. Gibbons, S.L.J. Goldstein, D.A. Gommers, R. Greco, J.P. Greenfield, P. Groener, A.M. Hagen, A. Hirst, P. Homeier, D. Horton, A.J. Hosseinzadeh, G. Hu, L. Hunkeler, J.S. Ivezić, Ž. Jain, A. Jenness, T. Kanarek, G. Kendrew, S. Kern, N.S. Kerzendorf, W.E. King, J. Kirkby, D. Kulkarni, A.M. Kumar, A. Lee, A. Lenz, D. Littlefair, S.P. Ma, Z. Macleod, D.M. Mastropietro, M. McCully, C. Montagnac, S. Morris, B.M. Mueller, M. Mumford, S.J. Muna, D. Murphy, N.A. Nelson, S. Nguyen, G.H. Ninan, J.P. Nöthe, M. Ogaz, S. Oh, S. Parejko, J.K. Parley, N. Pascual, S. Patil, A.A. Plunkett, A.L. Prochaska, J.X. Janga, V. Reddy Sabater, J. Sakurikar, P. Sherbert, L.E. Shih, A.Y. Sick, J. Singanamalla, S. Singer, L.P. Sladen, P.H. Streicher, O. Teuben, P. Thomas, S.W. Tremblay, G.R. Turner, J.E.H. Terrón, V. van Kerkwijk, M.H. de la Vega, A. Watkins, L.L. Weaver, B.A. Whitmore, J.B. Woillez, J. Department of Astrophysical Sciences Princeton University PrincetonNJ08544 United States Kavli Institute for Astrophysics and Space Research Massachusetts Institute of Technology 70 Vassar St. CambridgeMA02139 United States Space Telescope Science Institute 3700 San Martin Dr. BaltimoreMD21218 United States South African Astronomical Observatory PO Box 9 Observatory Cape Town7935 South Africa Univ Lyon Univ Lyon1 Ens de Lyon CNRS Centre de Recherche Astrophysique de Lyon UMR5574 Saint-Genis-LavalF-69230 France Caltech/IPAC 1200 E. California Blvd PasadenaCA91125 United States Department of Physics and Astronomy Minnesota State University Moorhead 1104 7th Ave S MoorheadMN56563 United States National Radio Astronomy Observatory 1003 Lopezville Rd SocorroNM87801 United States eScience Institute University of Washington 3910 15th Ave NE SeattleWA98195 United States University College London/Research IT Services Gower St LondonWC1E 6BT United Kingdom Astrochemistry Laboratory NASA Goddard Space Flight Center 8800 Greenbelt Road GreenbeltMD20771 United States Harvard-Smithsonian Center for Astrophysics 60 Garden St. CambridgeMA02138 United States Department of Physics and Astronomy Hunter College City University of New York 695 Park Avenue New YorkNY10065 United States Physics Graduate Center of the City University of New York New YorkNY United States Department of Astrophysics American Museum of Natural History New YorkNY United States Aperio Software Ltd. Headingley Enterprise and Arts Centre Bennett Road LeedsLS6 3HN United Kingdom Department of Physics & Astronomy University of Western Ontario 1151 Richmond St LondonONN5X4H1 Canada Department of Theoretical Physics & Astrophysics Masaryk University Kotlarska 2 Brno61137 Czech Republic INAF-Osservatorio Astronomico di Cagliari via della Scienza 5 SelargiusI-09047 Italy School of Physics & Astronomy University of Nottingham University Park NottinghamNG7 2RD Unit

The Astropy project supports and fosters the development of open-source and openly-developed Python packages that provide commonly-needed functionality to the astronomical community. A key element of the Astropy project is the core package astropy, which serves as the foundation for more specialized projects and packages. In this article, we provide an overview of the organization of the Astropy project and summarize key features in the core package as of the recent major release, version 2.0. We then describe the project infrastructure designed to facilitate and support development for a broader ecosystem of inter-operable packages. We conclude with a future outlook of planned new features and directions for the broader Astropy project. Copyright © 2018, The Authors. All rights reserved.

关键词： Astrophysics

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Author Correction: Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers

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Scientific data 2021年第1期8卷 242页

作者： Julien Cohen-Adad Eva Alonso-Ortiz Mihael Abramovic Carina Arneitz Nicole Atcheson Laura Barlow Robert L Barry Markus Barth Marco Battiston Christian Büchel Matthew Budde Virginie Callot Anna J E Combes Benjamin De Leener Maxime Descoteaux Paulo Loureiro de Sousa Marek Dostál Julien Doyon Adam Dvorak Falk Eippert Karla R Epperson Kevin S Epperson Patrick Freund Jürgen Finsterbusch Alexandru Foias Michela Fratini Issei Fukunaga Claudia A M Gandini Wheeler-Kingshott Giancarlo Germani Guillaume Gilbert Federico Giove Charley Gros Francesco Grussu Akifumi Hagiwara Pierre-Gilles Henry Tomáš Horák Masaaki Hori James Joers Kouhei Kamiya Haleh Karbasforoushan Miloš Keřkovský Ali Khatibi Joo-Won Kim Nawal Kinany Hagen H Kitzler Shannon Kolind Yazhuo Kong Petr Kudlička Paul Kuntke Nyoman D Kurniawan Slawomir Kusmia René Labounek Maria Marcella Laganà Cornelia Laule Christine S Law Christophe Lenglet Tobias Leutritz Yaou Liu Sara Llufriu Sean Mackey Eloy Martinez-Heras Loan Mattera Igor Nestrasil Kristin P O'Grady Nico Papinutto Daniel Papp Deborah Pareto Todd B Parrish Anna Pichiecchio Ferran Prados Àlex Rovira Marc J Ruitenberg Rebecca S Samson Giovanni Savini Maryam Seif Alan C Seifert Alex K Smith Seth A Smith Zachary A Smith Elisabeth Solana Y Suzuki George Tackley Alexandra Tinnermann Jan Valošek Dimitri Van De Ville Marios C Yiannakas Kenneth A Weber Ii Nikolaus Weiskopf Richard G Wise Patrik O Wyss Junqian Xu NeuroPoly Lab Institute of Biomedical Engineering Polytechnique Montreal Montreal QC Canada. jcohen@polymtl.ca. Functional Neuroimaging Unit CRIUGM Université de Montréal Montreal QC Canada. jcohen@polymtl.ca. Mila - Quebec AI Institute Montreal QC Canada. jcohen@polymtl.ca. NeuroPoly Lab Institute of Biomedical Engineering Polytechnique Montreal Montreal QC Canada. Department of Radiology Swiss Paraplegic Centre Nottwil Switzerland. Centre for Advanced Imaging The University of Queensland Brisbane Australia. Department of Radiology University of British Columbia Vancouver BC Canada. Athinoula A. Martinos Center for Biomedical Imaging Department of Radiology Massachusetts General Hospital Charlestown MA USA. Department of Radiology Harvard Medical School Boston MA USA. Harvard-Massachusetts Institute of Technology Health Sciences & Technology Cambridge MA USA. School of Information Technology and Electrical Engineering The University of Queensland Brisbane Australia. NMR Research Unit Queen Square MS Centre UCL Queen Square Institute of Neurology Faculty of Brain Sciences University College London London UK. Department of Systems Neuroscience University Medical Center Hamburg-Eppendorf Hamburg Germany. Department of Neurosurgery Medical College of Wisconsin Milwaukee WI USA. Aix-Marseille Univ CNRS CRMBM Marseille France. APHM Hopital Universitaire Timone CEMEREM Marseille France. Vanderbilt University Institute of Imaging Science Vanderbilt University Medical Center Nashville TN USA. Department of Computer and Software Engineering Polytechnique Montreal Montreal Canada. CHU Sainte-Justine Research Centre Montreal QC Canada. Centre de Recherche CHUS CIMS Sherbrooke Canada. Sherbrooke Connectivity Imaging Lab (SCIL) Computer Science department Université de Sherbrooke Sherbrooke Canada. Université de Strasbourg CNRS ICube Strasbourg France. UHB - University Hospital Brno and Masaryk University Department of Radiology and Nuclear

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Human genome meeting 2016 : Houston, TX, USA. 28 February - 2 March 2016

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Human genomics 2016年第1期10 Suppl 1卷 12页

作者： A. K. Srivastava Y. Wang R. Huang C. Skinner T. Thompson L. Pollard T. Wood F. Luo R. Stevenson R. Polimanti J. Gelernter X. Lin I. Y. Lim Y. Wu A. L. Teh L. Chen I. M. Aris S. E. Soh M. T. Tint J. L. MacIsaac F. Yap K. Kwek S. M. Saw M. S. Kobor M. J. Meaney K. M. Godfrey Y. S. Chong J. D. Holbrook Y. S. Lee P. D. Gluckman N. Karnani A. Kapoor D. Lee A. Chakravarti C. Maercker F. Graf M. Boutros G. Stamoulis F. Santoni P. Makrythanasis A. Letourneau M. Guipponi N. Panousis M. Garieri P. Ribaux E. Falconnet C. Borel S. E. Antonarakis S. Kumar J. Curran J. Blangero S. Chatterjee J. Akiyama D. Auer C. Berrios L. Pennacchio T. R. Donti G. Cappuccio M. Miller P. Atwal A. Kennedy A. Cardon C. Bacino L. Emrick J. Hertecant F. Baumer B. Porter M. Bainbridge P. Bonnen B. Graham R. Sutton Q. Sun S. Elsea Z. Hu P. Wang Y. Zhu J. Zhao M. Xiong David A. Bennett A. Hidalgo-Miranda S. Romero-Cordoba S. Rodriguez-Cuevas R. Rebollar-Vega E. Tagliabue M. Iorio E. D’Ippolito S. Baroni B. Kaczkowski Y. Tanaka H. Kawaji A. Sandelin R. Andersson M. Itoh T. Lassmann Y. Hayashizaki P. Carninci A. R. R. Forrest C. A. Semple E. A. Rosenthal B. Shirts L. Amendola C. Gallego M. Horike-Pyne A. Burt P. Robertson P. Beyers C. Nefcy D. Veenstra F. Hisama R. Bennett M. Dorschner D. Nickerson J. Smith K. Patterson D. Crosslin R. Nassir N. Zubair T. Harrison U. Peters G. Jarvik F. Menghi K. Inaki X. Woo P. Kumar K. Grzeda A. Malhotra H. Kim D. Ucar P. Shreckengast K. Karuturi J. Keck J. Chuang E. T. Liu B. Ji A. Tyler G. Ananda G. Carter H. Nikbakht M. Montagne M. Zeinieh A. Harutyunyan M. Mcconechy N. Jabado P. Lavigne J. Majewski J. B. Goldstein M. Overman G. Varadhachary R. Shroff R. Wolff M. Javle A. Futreal D. Fogelman L. Bravo W. Fajardo H. Gomez C. Castaneda C. Rolfo J. A. Pinto K. C. Akdemir L. Chin S. Patterson C. Statz S. Mockus S. N. Nikolaev X. I. Bonilla L. Parmentier B. King F. Bezrukov G. Kaya V. Zoete V. Seplyarskiy H. Sharpe T. McKee K. Popadin N. Basset-Seguin R. Ben Chaabene M. Andrianova C. Verdan K. Grosdemange O. Sumara M. E JCSRI Greenwood Genetic Center Greenwood USA School of Computing Clemson University Clemson USA Biochemical Genetics Laboratory Greenwood Genetic Center Greenwood USA Department Psychiatry Yale Sch Med and VA CT Healthcare Center West Haven USA Department Genetics Yale Sch Med and VA CT Healthcare Center West Haven USA Department Neurobiology Yale Sch Med and VA CT Healthcare Center West Haven USA Singapore Institute for Clinical Sciences Singapore Singapore National University of Singapore Singapore Singapore University of British Columbia Vancouver Canada KK Women’s and Children’s Hospital Singapore Singapore University of Southampton and University Hospital Southampton NHS Foundation Trust Southampton UK University of Auckland Auckland New Zealand McKusick-Nathans Institute of Genetic Medicine Johns Hopkins University School of Medicine Baltimore USA Esslingen University of Applied Sciences Esslingen Germany German Cancer Research Center Heidelberg Germany Department of Genetic Medicine and Development University of Geneva Medical School Geneva Switzerland Geneva University Hospitals-HUG Service of Genetic Medicine Geneva Switzerland GE3 Institute of Genetics and Genomics of Geneva University of Geneva Medical School Geneva Switzerland South Texas Diabetes and Obesity Institute School of Medicine University of Texas Rio-Grande Valley Edinburg USA South Texas Diabetes and Obesity Institute School of Medicine University of Texas Rio-Grande Valley Brownsville USA Institute of Genetic Medicine Johns Hopkins University Baltimore USA Genomics Division Lawrence Berkeley National Laboratory Berkeley USA Molecular and Human Genetics Baylor College of Medicine Houston USA Department of Translational Medical Sciences Federico II University Naples Italy Metabolon Inc Durham USA Section of Pediatric Neurology and Neuroscience Baylor College of Medicine Houston USA Tawam Hospital Abu Dhabi United Arab Emirates Stanford Medical School Stanford USA Sch

O1 The metabolomics approach to autism: identification of biomarkers for early detection of autism spectrum disorder A. K. Srivastava, Y. Wang, R. Huang, C. Skinner, T. Thompson, L. Pollard, T. Wood, F. Luo, R. Stevenson O2 Phenome-wide association study for smoking- and drinking-associated genes in 26,394 American women with African, Asian, European, and Hispanic descents R. Polimanti, J. Gelernter O3 Effects of prenatal environment, genotype and DNA methylation on birth weight and subsequent postnatal outcomes: findings from GUSTO, an Asian birth cohort X. Lin, I. Y. Lim, Y. Wu, A. L. Teh, L. Chen, I. M. Aris, S. E. Soh, M. T. Tint, J. L. MacIsaac, F. Yap, K. Kwek, S. M. Saw, M. S. Kobor, M. J. Meaney, K. M. Godfrey, Y. S. Chong, J. D. Holbrook, Y. S. Lee, P. D. Gluckman, N. Karnani, GUSTO study group O4 High-throughput identification of specific qt interval modulating enhancers at the SCN5A locus A. Kapoor, D. Lee, A. Chakravarti O5 Identification of extracellular matrix components inducing cancer cell migration in the supernatant of cultivated mesenchymal stem cells C. Maercker, F. Graf, M. Boutros O6 Single cell allele specific expression (ASE) IN T21 and common trisomies: a novel approach to understand DOWN syndrome and other aneuploidies G. Stamoulis, F. Santoni, P. Makrythanasis, A. Letourneau, M. Guipponi, N. Panousis, M. Garieri, P. Ribaux, E. Falconnet, C. Borel, S. E. Antonarakis O7 Role of microRNA in LCL to IPSC reprogramming S. Kumar, J. Curran, J. Blangero O8 Multiple enhancer variants disrupt gene regulatory network in Hirschsprung disease S. Chatterjee, A. Kapoor, J. Akiyama, D. Auer, C. Berrios, L. Pennacchio, A. Chakravarti O9 Metabolomic profiling for the diagnosis of neurometabolic disorders T. R. Donti, G. Cappuccio, M. Miller, P. Atwal, A. Kennedy, A. Cardon, C. Bacino, L. Emrick, J. Hertecant, F. Baumer, B. Porter, M. Bainbridge, P. Bonnen, B. Graham, R. Sutton, Q. Sun, S. Elsea O10 A novel causal methylation network approach to Alzheimer’s

关键词： Pulmonary Arterial Hypertension Oral Squamous Cell Carcinoma Deep Neural Network Autosomal Recessive Polycystic Kidney Disease Whole Genome Bisulfite Sequencing

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