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arXiv 2024年

作者： Chatterjee, Soumick Mattern, Hendrik Dörner, Marc Sciarra, Alessandro Dubost, Florian Schnurre, Hannes Khatun, Rupali Yu, Chun-Chih Hsieh, Tsung-Lin Tsai, Yi-Shan Fang, Yi-Zeng Yang, Yung-Ching Huang, Juinn-Dar Xu, Marshall Liu, Siyu Ribeiro, Fernanda L. Bollmann, Saskia Chintalapati, Karthikesh Varma Radhakrishna, Chethan Mysuru Ram Kumar, Sri Chandana Hudukula Sutrave, Raviteja Qayyum, Abdul Mazher, Moona Razzak, Imran Rodero, Cristobal Niederer, Steven Lin, Fengming Xia, Yan Wang, Jiacheng Qiu, Riyu Wang, Liansheng Panah, Arya Yazdan Jurdi, Rosana El Fu, Guanghui Arslan, Janan Vaillant, Ghislain Valabregue, Romain Dormont, Didier Stankoff, Bruno Colliot, Olivier Vargas, Luisa Chacón, Isai Daniel Pitsiorlas, Ioannis Arbeláez, Pablo Zuluaga, Maria A. Schreiber, Stefanie Speck, Oliver Nürnberger, Andreas Faculty of Computer Science Otto von Guericke University Magdeburg Magdeburg Germany Data and Knowledge Engineering Group Otto von Guericke University Magdeburg Magdeburg Germany Genomics Research Centre Human Technopole Milan Italy Biomedical Magnetic Resonance Otto von Guericke University Magdeburg Magdeburg Germany Department of Neurology Medical Faculty University Hospital of Magdeburg Magdeburg Germany German Centre for Neurodegenerative Diseases Magdeburg Germany Centre for Behavioural Brain Sciences Magdeburg Germany University Hospital Zurich University of Zurich Zurich Switzerland Google Inc. United States Translational Radiobiology Department of Radiation Oncology Universitätsklinikum Erlangen Friedrich-Alexnder-Universität Erlangen-Nürnberg Erlangen Germany National Yang Ming Chiao Tung University Hsinchu Taiwan School of Electrical Engineering and Computer Science University of Queensland Brisbane Australia Australian eHealth Research Centre Chile National Heart and Lung Institute Faculty of Medicine Imperial College London London United Kingdom Centre for Medical Image Computing Department of Computer Science University College London London United Kingdom School of Computer Science and Engineering University of New South Wales Sydney Australia Mohamed bin Zayed University of Artificial Intelligence Abu Dhabi United Arab Emirates The Alan Turing Institute London United Kingdom School of Computing University of Leeds Leeds United Kingdom Department of Computer Science School of Informatics Xiamen University Xiamen China Manteia Technologies Co. Ltd Xiamen China Leicester International Institute Dalian University of Technology Dalian China Sorbonne Université Institut du Cerveau - Paris Brain Institute ICM CNRS Inria Inserm AP-HP Hôpital de la Pitié Salpêtrière ParisF-75013 France Centre of Formation and Research in Artificial Intelligence Universidad de Los Andes Colombia Data Science Department EURECOM Sophia Antipolis Franc

The human brain receives nutrients and oxygen through an intricate network of blood vessels. Pathology affecting small vessels, at the mesoscopic scale, represents a critical vulnerability within the cerebral blood supply and can lead to severe conditions, such as Cerebral Small Vessel Diseases. The advent of 7 Tesla MRI systems has enabled the acquisition of higher spatial resolution images, making it possible to visualise such vessels in the brain. However, the lack of publicly available annotated datasets has impeded the development of robust, machine learning-driven segmentation algorithms. To address the complexities of mesoscopic vessel segmentation and to highlight the need for advanced techniques to manage the high noise levels and poor vessel-to-background contrast inherent in"ultra-high-resolution" data, the SMILE-UHURA challenge was organised. This challenge, held in conjunction with the ISBI 2023, in Cartagena de Indias, Colombia, aimed to provide a platform for researchers working on related topics. The SMILE-UHURA challenge addresses the gap in publicly available annotated datasets by providing an annotated dataset of Time-of-Flight angiography acquired with 7T MRI. This dataset was created through a combination of automated pre-segmentation and extensive manual refinement. In this manuscript, sixteen submitted methods and two baseline methods are compared both quantitatively and qualitatively on two different datasets: held-out test MRAs from the same dataset as the training data (with labels kept secret) and a separate 7T ToF MRA dataset where both input volumes and labels are kept secret. The results demonstrate that most of the submitted deep learning methods, trained on the provided training dataset, achieved reliable segmentation performance. Dice scores reached up to 0.838 ± 0.066 and 0.716 ± 0.125 on the respective datasets, with an average performance of up to 0.804 ± 0.15. Copyright © 2024, The Authors. All rights reserved.

关键词： Deep learning

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COVID-19 Infection Percentage Estimation from Computed Tomography Scans: Results and Insights from the International Per-COVID-19 Challenge

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Sensors 2024年第5期24卷 1557页

作者： Bougourzi, Fares Distante, Cosimo Dornaika, Fadi Taleb-Ahmed, Abdelmalik Hadid, Abdenour Chaudhary, Suman Yang, Wanting Qiang, Yan Anwar, Talha Breaban, Mihaela Elena Hsu, Chih-Chung Tai, Shen-Chieh Chen, Shao-Ning Tricarico, Davide Chaudhry, Hafiza Ayesha Hoor Fiandrotti, Attilio Grangetto, Marco Spatafora, Maria Ausilia Napoli Ortis, Alessandro Battiato, Sebastiano Institute of Applied Sciences and Intelligent Systems National Research Council of Italy Lecce73100 Italy Laboratoire LISSI University Paris-Est Creteil Paris Vitry sur Seine94400 France Department of Computer Science and Artificial Intelligence University of the Basque Country UPV/EHU Manuel Lardizabal 1 San Sebastian20018 Spain IKERBASQUE Basque Foundation for Science Bilbao48011 Spain UMR 8520 Universite Polytechnique Hauts-de-France Université de Lille CNRS Valenciennes59313 France Sorbonne Center for Artificial Intelligence Sorbonne University of Abu Dhabi P.O. Box 38044 Abu Dhabi United Arab Emirates College of Computer Science and Technology Taiyuan University of Technology Taiyuan030024 China School of Computing National University of Computer and Emerging Sciences Islamabad44000 Pakistan Faculty of Computer Science Alexandru Ioan Cuza University Iasi700506 Romania Institute of Data Science National Cheng Kung University No. 1 University Rd. East Dist. Tainan City701 Taiwan Dipartimento di Informatica Universita degli Studi di Torino Corso Svizzera 185 Torino10149 Italy Department of Mathematics and Computer Science University of Catania Catania95125 Italy

COVID-19 analysis from medical imaging is an important task that has been intensively studied in the last years due to the spread of the COVID-19 pandemic. In fact, medical imaging has often been used as a complementary or main tool to recognize the infected persons. On the other hand, medical imaging has the ability to provide more details about COVID-19 infection, including its severity and spread, which makes it possible to evaluate the infection and follow-up the patient’s state. CT scans are the most informative tool for COVID-19 infection, where the evaluation of COVID-19 infection is usually performed through infection segmentation. However, segmentation is a tedious task that requires much effort and time from expert radiologists. To deal with this limitation, an efficient framework for estimating COVID-19 infection as a regression task is proposed. The goal of the Per-COVID-19 challenge is to test the efficiency of modern deep learning methods on COVID-19 infection percentage estimation (CIPE) from CT scans. Participants had to develop an efficient deep learning approach that can learn from noisy data. In addition, participants had to cope with many challenges, including those related to COVID-19 infection complexity and crossdataset scenarios. This paper provides an overview of the COVID-19 infection percentage estimation challenge (Per-COVID-19) held at MIA-COVID-2022. Details of the competition data, challenges, and evaluation metrics are presented. The best performing approaches and their results are described and discussed. © 2024 by the authors.

关键词： COVID-19

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IoT-Based Wearable Devices for Patients Suffering from Alzheimer Disease

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Contrast Media and Molecular Imaging 2022年第0期2022卷 3224939页

作者： Salehi, Waleed Gupta, Gaurav Bhatia, Surbhi Koundal, Deepika Mashat, Arwa Belay, Assaye Yogananda School of Artificial Intelligence Computer and Data Sciences Shoolini University HP Solan 173229 India Department of Information Systems College of Computer Science and Information Technology King Faisal University Al Hasa Saudi Arabia Department of Systemics School of Computer Science University of Petroleum and Energy Studies Uttrakhand Dehradun India Faculty of Computing and Information Technology King Abdulaziz University Rabigh Saudi Arabia Department of Statistics Mizan-Tepi University Ethiopia

The disorder of Alzheimer's (AD) is defined as a gradual deterioration of cognitive functions, such as the failure of spatial cognition and short-term memory. Besides difficulties in memory, a person with this disease encounters visual processing difficulties and even awareness and identifying of their beloved ones. Nowadays, recent technologies made this possible to connect everything that exists around us on Earth through the Internet, this is what the Internet of Things (IoT) made possible which can capture and save a massive amount of data that are considered very important and useful information which then can be valuable in training of the various state-of-the-art machine and deep learning algorithms. Assistive mobile health applications and IoT-based wearable devices are helping and supporting the ongoing health screening of a patient with AD. In the early stages of AD, the wearable devices and IoT approach aim to keep AD patients mentally active in all of life's daily activities, independent from their caregivers or any family member of the patient. These technological solutions have great potential in improving the quality of life of an AD patient as this helps to reduce pressure on healthcare and to minimize the operational cost. The purpose of this study is to explore the State-of-the-Art wearable technologies for people with AD. Significance, challenges, and limitations that arise and what will be the future of these technological solutions and their acceptance. Therefore, this study also provides the challenges and gaps in the current literature review and future directions for other researchers working in the area of developing wearable devices. © 2022 Waleed Salehi et al.

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Lessons Learned from Assessing Trustworthy AI in Practice

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Digital Society 2023年第3期2卷 1-25页

作者： Vetter, Dennis Amann, Julia Bruneault, Frédérick Coffee, Megan Düdder, Boris Gallucci, Alessio Gilbert, Thomas Krendl Hagendorff, Thilo van Halem, Irmhild Hickman, Eleanore Hildt, Elisabeth Holm, Sune Kararigas, Georgios Kringen, Pedro Madai, Vince I. Wiinblad Mathez, Emilie Tithi, Jesmin Jahan Westerlund, Magnus Wurth, Renee Zicari, Roberto V. Computational Vision and Artificial Intelligence Lab Goethe University Frankfurt Frankfurt Am Main Germany Z-Inspection® Initiative Venice Italy Health Ethics and Policy Lab ETH Zurich Zurich Switzerland Strategy and Innovation Careum Foundation Zurich Switzerland Philosophie Departement Collège André-Laurendeau Montréal Canada École Des Médias Université du Québec À Montréal Montréal Canada Department of Medicine Division of Infectious Diseases and Immunology New York University Grossman School of Medicine New York City USA Department of Computer Science University of Copenhagen Copenhagen Denmark Digital Life Initiative Cornell Tech New York City USA Cluster of Excellence “Machine Learning: New Perspectives for Science” University of Tuebingen Tuebingen Germany School of Law University of Bristol Bristol UK Center for the Study of Ethics in the Professions Illinois Institute of Technology Chicago USA Department of Business Management and Analytics Arcada University of Applied Sciences Helsinki Finland Department of Food & Resource Economics University of Copenhagen Copenhagen Denmark Department of Physiology Faculty of Medicine University of Iceland Reykjavik Iceland QUEST Centre for Responsible Research Berlin Institute of Health Charité Universitätsmedizin Berlin Berlin Germany Faculty of Computing Engineering and the Built Environment School of Computing and Digital Technology Birmingham City University Birmingham UK Parallel Computing Labs Intel Santa Clara USA School of Economics Innovation and Technology Kristiania University College Oslo Norway Data Science Graduate School Seoul National University Seoul South Korea

Building artificial intelligence (AI) systems that adhere to ethical standards is a complex problem. Even though a multitude of guidelines for the design and development of such trustworthy AI systems exist, these guidelines focus on high-level and abstract requirements for AI systems, and it is often very difficult to assess if a specific system fulfills these requirements. The Z-Inspection® process provides a holistic and dynamic framework to evaluate the trustworthiness of specific AI systems at different stages of the AI lifecycle, including intended use, design, and development. It focuses, in particular, on the discussion and identification of ethical issues and tensions through the analysis of socio-technical scenarios and a requirement-based framework for ethical and trustworthy AI. This article is a methodological reflection on the Z-Inspection® process. We illustrate how high-level guidelines for ethical and trustworthy AI can be applied in practice and provide insights for both AI researchers and AI practitioners. We share the lessons learned from conducting a series of independent assessments to evaluate the trustworthiness of real-world AI systems, as well as key recommendations and practical suggestions on how to ensure a rigorous trustworthiness assessment throughout the lifecycle of an AI system. The results presented in this article are based on our assessments of AI systems in the healthcare sector and environmental monitoring, where we used the framework for trustworthy AI proposed in the Ethics Guidelines for Trustworthy AI by the European Commission’s High-Level Expert Group on AI. However, the assessment process and the lessons learned can be adapted to other domains and include additional frameworks.

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Transformers in Medical Image Analysis: A Review

arXiv

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arXiv 2022年

作者： He, Kelei Gan, Chen Li, Zhuoyuan Rekik, Islem Yin, Zihao Ji, Wen Gao, Yang Wang, Qian Zhang, Junfeng Shen, Dinggang Medical School of Nanjing University Nanjing China National Institute of Healthcare Data Science Nanjing University Nanjing China State Key Laboratory for Novel Software Technology Nanjing University Nanjing China BASIRA Lab Faculty of Computer and Informatics Engineering Istanbul Technical University Istanbul Turkey School of Science and Engineering Computing University of Dundee United Kingdom School of Biomedical Engineering ShanghaiTech University Shanghai China Department of Research and Development Shanghai United Imaging Intelligence Co. Ltd. Shanghai China

Transformers have dominated the field of natural language processing, and recently impacted the computer vision area. In the field of medical image analysis, Transformers have also been successfully applied to full-stack clinical applications, including image synthesis/reconstruction, registration, segmentation, detection, and diagnosis. Our paper aims to promote awareness and application of Transformers in the field of medical image analysis. Specifically, we first overview the core concepts of the attention mechanism built into Transformers and other basic components. Second, we review various Transformer architectures tailored for medical image applications and discuss their limitations. Within this review, we investigate key challenges revolving around the use of Transformers in different learning paradigms, improving the model efficiency, and their coupling with other techniques. We hope this review can give a comprehensive picture of Transformers to the readers in the field of medical image analysis. © 2022, CC BY-SA.

关键词： Diagnosis

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Author Correction: Ultra-high-granularity detector simulation with intra-event aware generative adversarial network and self-supervised relational reasoning

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Nature communications 2024年第1期15卷 5825页

作者： Baran Hashemi Nikolai Hartmann Sahand Sharifzadeh James Kahn Thomas Kuhr ORIGINS Data Science Lab Technical University Munich Munich Germany. baran.hashemi@origins-cluster.de. Faculty of Physics Ludwig Maximilians University in Munich Munich Germany. Faculty of Computer Science Ludwig Maximilians University in Munich Munich Germany. Helmholtz AI Karlsruhe Germany. Steinbuch Centre for Computing (SCC) Karlsruhe Institute of Technology (KIT) Karlsruhe Germany.

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Analysis of 5G academic Network based on graph representation learning method

arXiv

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arXiv 2021年

作者： Li, Xiaoming Xu, Guangquan Yu, Wei Jiao, Pengfei Song, Xiangyu Zhejiang Yuexiu University of Foreign Languages School of International Business Shaoxing China Shaoxing Key Laboratory of Intelligent Monitoring and Prevention of Smart City Shaoxing China School of Big Data School of Big Data Qingdao Huanghai University Qingdao China College of Intelligence and Computing Tianjin University Tianjin China School of IT Faculty of Science Engineering and Built Environment Deakin University GeelongVIC3220 Australia

With the rapid development of 5th Generation Mobile Communication Technology (5G), the diverse forms of collaboration and extensive data in academic social networks constructed by 5G papers make the management and analysis of academic social networks increasingly challenging. Despite the particular success achieved by representation learning in analyzing academic and social networks, most present presentation learning models focus on maintaining the first-order and second-order similarity of nodes. They rarely possess similar structural characteristics of spatial independence in the network. This paper proposes a Low-order Network representation Learning Model (LNLM) based on Non-negative Matrix Factorization (NMF) to solve these problems. The model uses the random walk method to extract low-order features of nodes and map multiple components to a low-dimensional space, effectively maintaining the internal correlation between members. This paper verifies the performance of this model, conducts comparative experiments on four test datasets and four real network datasets through downstream tasks such as multi-label classification, clustering, and link prediction. Comparing eight mainstream network representation learning models shows that the proposed model can significantly improve the detection efficiency and learning methods and effectively extract local and low-order features of the network. © 2021, CC BY.

关键词： Non-negative matrix factorization

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Secure Intelligent Reflecting Surface Aided Integrated Sensing and Communication

arXiv

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arXiv 2022年

作者： Hua, Meng Wu, Qingqing Chen, Wen Dobre, Octavia A. Swindlehurst, A. Lee The State Key Laboratory of Internet of Things for Smart City University of Macau 999078 China The Department of Electronic Engineering Shanghai Institute of Advanced Communications and Data Sciences Shanghai Jiao Tong University Minhang200240 China The Faculty of Engineering and Applied Science Memorial University St. John’sNLA1B 3X5 Canada The Center for Pervasive Communications and Computing University of California at Irvine IrvineCA92697 United States

In this paper, an intelligent reflecting surface (IRS) is leveraged to enhance the physical layer security of an integrated sensing and communication (ISAC) system in which the IRS is deployed to not only assist the downlink communication for multiple users, but also create a virtual line-of-sight (LoS) link for target sensing. In particular, we consider a challenging scenario where the target may be a suspicious eavesdropper that potentially intercepts the communication-user information transmitted by the base station (BS). To ensure the sensing quality while preventing the eavesdropping, dedicated sensing signals are transmitted by the BS. We investigate the joint design of the phase shifts at the IRS and the communication as well as radar beamformers at the BS to maximize the sensing beampattern gain towards the target, subject to the maximum information leakage to the eavesdropping target and the minimum signal-to-interference-plus-noise ratio (SINR) required by users. Based on the availability of perfect channel state information (CSI) of all involved user links and the accurate target location at the BS, two scenarios are considered and two different optimization algorithms are proposed. For the ideal scenario where the CSI of the user links and the target location are perfectly known at the BS, a penalty-based algorithm is proposed to obtain a high-quality solution. In particular, the beamformers are obtained with a semi-closed-form solution using Lagrange duality and the IRS phase shifts are solved for in closed form by applying the majorization-minimization (MM) method. On the other hand, for the more practical scenario where the CSI is imperfect and the target location is uncertain, a robust algorithm based on the S-procedure and sign-definiteness approaches is proposed. Simulation results demonstrate the effectiveness of the proposed scheme in achieving a trade-off between the communication quality and the sensing quality, and also show the tremendous pot

关键词： Channel state information

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Location embedding based pairwise distance learning for fine-grained diagnosis of urinary stones

arXiv

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arXiv 2024年

作者： Jin, Qiangguo Huang, Jiapeng Sun, Changming Cui, Hui Xuan, Ping Su, Ran Wei, Leyi Wu, Yu-Jie Wu, Chia-An Duh, Henry B.L. Lu, Yueh-Hsun School of Software Northwestern Polytechnical University Shaanxi China Yangtze River Delta Research Institute of NPU Suzhou China CSIRO Data61 Sydney Australia Department of Computer Science and Information Technology La Trobe University Melbourne Australia School of Engineering Shantou University Guangdong China College of Intelligence and Computing Tianjin University Tianjin China School of Information Xiamen University Xiamen China AIDD Faculty of Applied Science Macao Polytechnic University China Department of Radiology Shuang-Ho Hospital Taipei Medical University Taipei Taiwan Master of Public Health Program National Yang Ming Chiao Tung University Taipei Taiwan School of Design The Hong Kong Polytechnic University Hong Kong Department of Radiology School of Medicine College of Medicine Taipei Medical University Taipei Taiwan

The precise diagnosis of urinary stones is crucial for devising effective treatment strategies. The diagnostic process, however, is often complicated by the low contrast between stones and surrounding tissues, as well as the variability in stone locations across different patients. To address this issue, we propose a novel location embedding based pairwise distance learning network (LEPD-Net) that leverages low-dose abdominal X-ray imaging combined with location information for the fine-grained diagnosis of urinary stones. LEPD-Net enhances the representation of stone-related features through context-aware region enhancement, incorporates critical location knowledge via stone location embedding, and achieves recognition of fine-grained objects with our innovative fine-grained pairwise distance learning. Additionally, we have established an in-house dataset on urinary tract stones to demonstrate the effectiveness of our proposed approach. Comprehensive experiments conducted on this dataset reveal that our framework significantly surpasses existing state-of-the-art methods. Copyright © 2024, The Authors. All rights reserved.

关键词： Embeddings

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Classification of Cancer Drug Compounds for Radiation Protection Optimization Using CART

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Procedia Computer science 2019年 161卷 458-465页

作者： Heri Kuswanto Rizky Mubarok Department of Statistics Faculty of Mathematics Computing and Data Science Kampus ITS Sukolilo Surabaya 60111 Indonesia

This paper applies Classification and Regression Tree (CART) to classify the selected compounds of cancer drugs related to radiation protection for cancer treatment. CART is one of machine learning methods that has been widely applied in drug design due to its simple algorithm and efficiency. The classification is applied to the 5%, 10%, 20%, 30%, 35% most important features selected by Mean Decreasing Gini Index. Moreover, the performance of CART on classification with full features is also investigated. The analysis shows that classification of cancer drug compounds using CART reached 79% accuracy when it uses 5% or 10% most important features. In this case, the performance of CART is slightly better than other complex machine learning methods applied in the previous researches.

关键词： CART toxicity machine learning drug discovery

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