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Activity Diagram Synthesis Using Labelled Graphs and the Genetic Algorithm

Journal of computer Science & technology 2021年第6期36卷 1388-1406页

作者： Chun-Hui Wang Zhi Jin Wei Zhang Didar Zowghi Hai-Yan Zhao Wen-Pin Jiao Key Laboratory of High Confidence Software Technology(Ministry of Education) Peking University Beijing 100871China Institute of Software School of Electronics Engineering and Computer SciencePeking UniversityBeijing 100871China School of Computer Science Inner Mongolia Normal UniversityHohhot 010022China Faculty of Engineering and Information Technology University of TechnologySydney 2007Australia

Many applications need to meet diverse requirements of a large-scale distributed user *** challenges the current requirements engineering ***-based requirements engineering was proposed as an umbrella term for dealing with the requirements development in the context of the large-scale user ***,there are still many *** others,a key issue is how to merge these requirements to produce the synthesized requirements description when a set of requirements descriptions from different participants are *** techniques are needed for supporting the requirements *** are widely used in industry to represent *** paper chooses the activity diagrams and proposes a novel approach for the activity diagram synthesis which adopts the genetic algorithm to repeatedly modify a population of individual solutions toward an optimal *** a result,it can automatically generate a resulting diagram which combines the commonalities as many as possible while leveraging the variabilities of a set of input *** approach is featured by:1)the labelled graph proposed as the representation of the candidate solutions during the iterative evolution;2)the generalized entropy proposed and defined as the measurement of the solutions;3)the genetic algorithm designed for sorting out the high-quality *** cases of different scales are used to evaluate the effectiveness of the *** experimental results show that not only the approach gets high precision and recall but also the resulting diagram satisfies the properties of minimization and information preservation and can support the requirements traceability.

关键词： crowd-based requirements engineering requirements synthesis activity diagram genetic algorithm

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Joint Clustering and Analyze Single Cell Multi-omics Data by scMOGAN

Joint Clustering and Analyze Single Cell Multi-omics Data by...

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2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023

作者： An, Congcong Chen, Yiwen Nie, Shanling Yang, Hai East China University of Science and Technology Department of Computer Science and Engineering Shanghai China Shanghai Key Laboratory of Computer Software Evaluating and Testing Shanghai China National University of Singapore Center for Continuing and Lifelong Education Singapore The University of Sydney Faculty of Engineering Australia

ISBN: (纸本)9798350337488

Advancements in single-cell multi-omics sequencing technologies have dramatically transformed the analysis of cellular states at single-cell resolution. Cluster analyses leveraging single-cell transcriptome and epigenome data have enabled the characterization of cellular states and the delineation of transcriptomic regulatory programs associated with cellular heterogeneity. However, the high dimensionality, sparsity, and heterogeneity inherent to multi-omics data present significant challenges to their clustering analysis. In this study, we introduced single-cell Multi-Omics Generative Adversarial Networks (scMOGAN), an unsupervised clustering model specifically tailored for single-cell transcriptome and epigenome data. scMOGAN accomplishes this by efficaciously modeling the omics data and mining potential features through neural networks, ultimately utilizing Gaussian mixture models for cell type identification. To validate and scrutinize the performance of scMOGAN, we performed analyses on two actual multi-omics datasets and one simulated dataset. The results demonstrate that scMOGAN surpasses other existing methods in terms of clustering performance, underscoring its efficacy in navigating the complexities of multi-omics data. © 2023 IEEE.

关键词： clustering generative adversarial networks single cell multi-omics data unsupervised learning

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SAMMS: Multi-modality Deep Learning with the Foundation Model for the Prediction of Cancer Patient Survival

SAMMS: Multi-modality Deep Learning with the Foundation Mode...

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2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023

作者： Zhu, Wen Chen, Yiwen Nie, Shanling Yang, Hai East China University of Science and Technology Department of Computer Science and Engineering Shanghai China Shanghai Key Laboratory of Computer Software Evaluating and Testing Shanghai China National University of Singapore Center for Continuing and Lifelong Education Singapore The University of Sydney Faculty of Engineering Australia

ISBN: (纸本)9798350337488

Cancer survival prediction is pivotal in tailoring individualized treatment strategies and guiding clinician decision-making. Yet, existing methodologies grapple with efficiently harnessing the intricate distribution of medical data spanning various modalities. In response, we present SAMMS, an advanced multi-omics multimodal deep learning framework tailored for survival prediction. SAMMS leverages the robust image segmentation model, "Segment Anything"to adeptly characterize pathological images. This prowess is further enhanced by integrating multi-omics data and clinical insights, facilitating holistic modeling across a diverse modal spectrum. The framework weaves a modality-specific subnetwork with a cross-modality common subnetwork, meticulously capturing intra-modality nuances and inter-modality correlations. SAMMS eclipsed its contemporaries by delivering remarkable performance on TCGA's LGG and KIRC tumor datasets. A battery of analyses underscored SAMMS's unparalleled capability to distill multifaceted insights from multimodal datasets, yielding richer and more integrative multimodal representations. Such strides promise significant advancements in cancer survival analytics, bolstering the precision and efficacy of patient-centric treatments, disease oversight, and clinical decision processes. © 2023 IEEE.

关键词： Multi-omics Data Pathological Images Segment Anything Survival Analysis

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Building the metaverse using digital twins at all scales,states,and relations

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Virtual Reality & Intelligent Hardware 2022年第6期4卷 459-470页

作者： Zhihan LV Shuxuan XIE Yuxi LI M.Shamim HOSSAIN Abdulmotaleb El SADDIK Department of Game Design Faculty of ArtsUppsala UniversitySweden College of Computer Science and Technology Qingdao UniversityQingdaoChina Department of Software Engineering College of Computer and Information SciencesKing Saud UniversityRiyadhSaudi Arabia School of Electrical Engineering and Computer Science(EECS) University of OttawaOttawaOntarioCanada

Developments in new-generation information technology have enabled Digital Twins to reshape the physical world into a virtual digital space and provide technical support for constructing the *** objects can be at the micro-,meso-,or *** Metaverse is a complex collection of solid,liquid,gaseous,plasma,and other uncertain ***,the Metaverse integrates tangibles with social relations,such as interpersonal(friends,partners,and family)and social relations(ethics,morality,and law).This review introduces some principles and laws,such as broken windows theory,small-world phenomenon,survivor bias,and herd behavior,for constructing a Digital Twins model for social ***,from multiple perspectives,this article reviews mappings of tangible and intangible real-world objects to the Metaverse using the Digital Twins model.

关键词： Digital twins Metaverse Sensor

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Sinhala Named Entity Recognition Model: Domain-Specific Classes in Sports 4

Sinhala Named Entity Recognition Model: Domain-Specific Clas...

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4th International Conference on Advancements in Computing, ICAC 2022

作者： Wijesinghe, W.M.S.K. Tissera, Muditha Department of Statistics and Computer Science Faculty of Science University of Kelaniya Sri Lanka Department of Software Engineering Faculty of Computing & Technology University of Kelaniya Sri Lanka

ISBN: (纸本)9798350398090

Named Entity Recognition (NER) is one of the crucial and vital subtasks that must be solved in most Natural Language Processing (NLP) tasks. However, constructing a NER system for the Sinhala Language is challenging. Because it comes under the category of low-resource languages. Therefore, the proposed approach attempted designing a mechanism to identify specific named entities in the sports domain. Firstly, a domain-specific corpus was built using Sinhala sport e-News articles. Then a semi-automated, rule-based component named as "Class_Label_Suggester" was built to annotate pre-defined named entities. After auto annotation, the outcome was further validated manually with a little effort. Finally, it was trained using the annotated data. Linear Perceptron, Stochastic Gradient Descent (SGD), Multinomial Naive Bayes (MNB), and Passive Aggressive classifiers were used to train the NER model. Though, the above Machine Learning (ML) algorithms showed approximately 98% accuracy, the MNB model demonstrated highest accuracy for the identified class labels of which, 99.76% for 'Ground', 99.53% for 'School', 98.55% for 'Tournament', and 97.87% for 'Other' classes. Additionally, high precision values of the above classes were 81%, 72%, 62%, and 98% respectively. An accurately annotated Sinhala dataset and the trained Sinhala NER model are main contributions of the study. © 2022 IEEE.

关键词： Sports

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PMMVar: Leveraging Multi-level Protein Structures for Enhanced Coding Variant Pathogenicity Prediction

PMMVar: Leveraging Multi-level Protein Structures for Enhanc...

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2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023

作者： Chen, Yijia Chen, Yiwen Nie, Shanling Yang, Hai East China University of Science and Technology Department of Computer Science and Engineering Shanghai China Shanghai Key Laboratory of Computer Software Evaluating and Testing Shanghai China National University of Singapore Center for Continuing and Lifelong Education Singapore The University of Sydney Faculty of Engineering Australia

ISBN: (纸本)9798350337488

Genomic variants, which can disrupt cellular functions, present a challenge in distinguishing deleterious from benign instances. While assessing genome-wide functional impacts, many current algorithms neglect protein tertiary structure of coding region variants due to limitations in protein structural prediction. This study introduces PMMVar, an advanced multimodal deep convolutional network, which adeptly integrates protein tertiary structures with conservation properties from ESM-2, supplemented by other protein structural sequences. PMMVar achieves outstanding performance on the latest clinical variant datasets, NCBI ClinVar (2023), and the Mendelian variant dataset, surpassing existing benchmarks. Ablation analyses validate the significance of protein multi-level structures in enhancing the model's accuracy. Overall, our findings spotlight the essential role of multi-level protein structures in pathogenicity predictions and their potential to discern deleterious genomic variants effectively. © 2023 IEEE.

关键词： deep learning multimodal pathogenicity protein structure variant

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Detection Algorithm for Safety Helmet Wearing of Chemical Plant Personnel Based on Improved YOLOv5m

Detection Algorithm for Safety Helmet Wearing of Chemical Pl...

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Cognitive Computing and Complex Data (ICCD), International Conference on the

作者： Qiangqiang Li Kun Yu Haoran Wang Qianjun Guan Shihong Gao Jiamin Jiang Faculty of Computer and Software Engineering Huaiyin Institute of Technology Huai’an Jiangsu China

Wearing a safety helmet at the work site of a chemical plant can effectively prevent safety accidents caused by head injuries, so it is very important to detect whether employees wear safety helmets. In order to solve problems such as serious information loss, large number of parameters, and weak detection ability of small targets in complex scenes in the sampling process of helmet detection algorithm. In this paper, an improved lightweight safety helmet detection algorithm LP- YOLOv5m (Lightweight And High Precision YOLOv5m) based on YOLOv5m is designed. LP-YOLOv5m incorporates the Wise-IoU (Wiou) loss function to enhance model generalization. Additionally, we add a small object detection layer to improve the feature extraction ability for small objects. Furthermore, upsampling was performed using CARAFE. Finally, a lightweight module named C3-F was proposed, which replaced the Bottleneck in the C3 module with FasterNet Block, which could effectively reduce the network model size. Comparative laboratory findings demonstrate that our improved model achieves a mAP50 of 92.1%, surpassing YOLOv5m by 3 percentage points while reducing the model size by 23.3%. The LP-YOLOv5m model can be better applied to practical scene requirements, and can effectively solve practical problems.

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The Low-Cost IoT Mornitoring the Quality of River: A Case Study of Wang River in Lampang Municipality 27

The Low-Cost IoT Mornitoring the Quality of River: A Case St...

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27th International computer Science and engineering Conference, ICSEC 2023

作者： Krueganta, Narong Chieochan, Oran Saokaew, Anukit Yana, Ekkachai Singkaew, Chaowoot Sawangtook, Weerachai Boonchieng, Ekkarat Wongchai, Warakhom Srimakorn, Sakchai School of Industrial Technology Lampang Rajabhat University Faculty of Industrial Technology Lampang52000 Thailand School of Information Technology Lampang Rajabhat University Faculty of Sciences Lampang52100 Thailand School of Environmental Innovation Lampang Rajabhat University Faculty of Science Lampang52100 Thailand School of Computer Engineering Lampang Rajabhat University Faculty of Industrial Technology Lampang52100 Thailand Chiang Mai University Faculty of Sciences Department of Computer Sciences Chiang Mai50200 Thailand School of Industrial Electrical Engineering Lampang Rajabhat University Faculty of Industrial Technology Lampang52000 Thailand School of Software Engineering Lampang Rajabhat University Faculty of Industrial Technology Lampang52000 Thailand

ISBN: (纸本)9798350342109

The research project focuses on prototyping an IoT (Internet of Things) system for measuring and monitoring the quality of the Wang River in Lampang Municipality. The system utilizes EC (Electrical Conductivity), pH, and temperature sensors connected to an ESP32 microcontroller with a custom-developed board. Additionally, the IoT system is supported by a solar cell system to provide power. The software programming is implemented using Arduino C++ on the PlatformIO platform, which is integrated with Visual Studio code. The IoT platform chosen for this project is ThingsBoard, specifically the community version. The research findings indicate that the utilization of IoT technology combined with the sensors has improved the prototype of a low-cost IoT monitoring system for assessing the quality of the Wang River in Lampang Municipality. © 2023 IEEE.

关键词： Rivers

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A Two-Tier Framework Based on GoogLeNet and YOLOv3 Models for Tumor Detection in MRI

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computers, Materials & Continua 2022年第7期72卷 73-92页

作者： Farman Ali Sadia Khan Arbab Waseem Abbas Babar Shah Tariq Hussain Dongho Song Shaker EI-Sappagh Jaiteg Singh Department of Software Sejong UniversitySeoul05006Korea Institute of Computer Sciences&Information Technology The University of AgriculturePeshawar25130Pakistan College of Technological Innovation Zayed UniversityDubai19282UAE Department of Software Korea Aerospace UniversitySeoul10540Korea Faculty of Computer Science and Engineering Galala UniversitySuez435611Egypt Information Systems Department Faculty of Computers and Artificial IntelligenceBenha UniversityBanha13518Egypt Chitkara University Institute of Engineering&Technology Chitkara UniversityRajpura140401India

Medical Image Analysis(MIA)is one of the active research areas in computer vision,where brain tumor detection is the most investigated domain among researchers due to its deadly *** tumor detection in magnetic resonance imaging(MRI)assists radiologists for better analysis about the exact size and location of the ***,the existing systems may not efficiently classify the human brain tumors with significantly higher *** addition,smart and easily implementable approaches are unavailable in 2D and 3D medical images,which is the main problem in detecting the *** this paper,we investigate various deep learning models for the detection and localization of the tumor in MRI.A novel twotier framework is proposed where the first tire classifies normal and tumor MRI followed by tumor regions localization in the second ***,in this paper,we introduce a well-annotated dataset comprised of tumor and normal *** experimental results demonstrate the effectiveness of the proposed framework by achieving 97%accuracy using GoogLeNet on the proposed dataset for classification and 83%for localization tasks after finetuning the pre-trained you only look once(YOLO)v3 model.

关键词： Tumor localization MRI Image classification GoogLeNet YOLOv3

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Lightweight Protective Clothing Detection Algorithm Based on Ghost Convolution and GSConv Convolution

Lightweight Protective Clothing Detection Algorithm Based on...

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Cognitive Computing and Complex Data (ICCD), International Conference on the

作者： Qianjun Guan Kun Yu Haoran Wang Qiangqiang Li Shihong Gao Faculty of Computer and Software Engineering Huaiyin Institute of Technology Huai’an Jiangsu China

GhostNet is proposed by Huawei Noah’s Ark Laboratory in CVPR2020, which can be used with the same accuracy, with less speed and less computation than SOTA method. This convolution is a low-cost operation used to decrease the amount of computation and related parameters. Ghost convolution can be used as an alternative to traditional convolution operations because they have the same accuracy. However, utilize significantly less computation and a much smaller parameter count. GSConv(Group-Shared Convolution) is a convolution operation based on group shared weights. This operation achieves efficient parallel convolution operations by grouping convolution kernels. In this way, the parameters used and calculation complexity of the model can be reduced to some extent. This makes the network more computationally efficient and smaller in model size while maintaining accuracy. The algorithm can detect the location of protective clothing quickly and efficiently, and its accuracy and efficiency have been verified. Because the algorithm adopts lightweight network structure, real-time detection can be realized on lowpower devices efficiently. The model architecture enhances the performance based on the YOLOv5 target detection algorithm by incorporating additional features. So that the model can maintain a high precision, which is crucial for the protective clothing detection algorithm.

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